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PDB: 115 件

7K9K
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SARS-CoV-2 Spike RBD in complex with neutralizing Fab 2H04 (local refinement)
分子名称: 2H04 heavy chain, 2H04 light chain, Spike protein S1, ...
著者Errico, J.M, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-09-29
公開日2021-09-29
最終更新日2021-11-10
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structural mechanism of SARS-CoV-2 neutralization by two murine antibodies targeting the RBD.
Cell Rep, 37, 2021
2NZ1
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Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The CC-Chemokine CCL2/MCP-1
分子名称: Hypothetical protein GAMMAHV.M3, Small inducible cytokine A2
著者Alexander-Brett, J.M, Fremont, D.H.
登録日2006-11-22
公開日2007-12-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Dual GPCR and GAG mimicry by the M3 chemokine decoy receptor.
J.Exp.Med., 204, 2007
2HG0
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Structure of the West Nile Virus envelope glycoprotein
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein
著者Nybakken, G.E, Nelson, C.A, Chen, B.R, Diamond, M.S, Fremont, D.H.
登録日2006-06-26
公開日2006-11-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of the West Nile virus envelope glycoprotein.
J.Virol., 80, 2006
2NYZ
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Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The C- Chemokine XCL1
分子名称: Hypothetical protein GAMMAHV.M3, Lymphotactin
著者Alexander-Brett, J.M, Fremont, D.H.
登録日2006-11-21
公開日2007-12-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Dual GPCR and GAG mimicry by the M3 chemokine decoy receptor.
J.Exp.Med., 204, 2007
5KVG
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Zika specific antibody, ZV-67, bound to ZIKA envelope DIII
分子名称: CHLORIDE ION, ZIKA Envelope DIII, ZV-67 Antibody Fab Heavy Chain, ...
著者Zhao, H, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-07-14
公開日2016-08-03
最終更新日2016-08-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Basis of Zika Virus-Specific Antibody Protection.
Cell, 166, 2016
5KVF
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Zika specific antibody, ZV-64, bound to ZIKA envelope DIII
分子名称: GLYCEROL, ZV-64 Antibody Fab Heavy Chain, ZV-64 Antibody Fab Light Chain, ...
著者Zhao, H, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-07-14
公開日2016-08-03
最終更新日2016-08-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Basis of Zika Virus-Specific Antibody Protection.
Cell, 166, 2016
5KVE
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Zika specific antibody, ZV-48, bound to ZIKA envelope DIII
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Genome polyprotein, ...
著者Zhao, H, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-07-14
公開日2016-08-10
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Basis of Zika Virus-Specific Antibody Protection.
Cell, 166, 2016
5KVD
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Zika specific antibody, ZV-2, bound to ZIKA envelope DIII
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SODIUM ION, ...
著者Zhao, H, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-07-14
公開日2016-08-03
最終更新日2016-08-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Basis of Zika Virus-Specific Antibody Protection.
Cell, 166, 2016
7N1I
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CryoEM structure of Venezuelan equine encephalitis virus VLP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid, E1 envelope glycoprotein, ...
著者Basore, K, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-05-27
公開日2021-10-13
最終更新日2021-11-10
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of Venezuelan equine encephalitis virus in complex with the LDLRAD3 receptor.
Nature, 598, 2021
7N1H
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CryoEM structure of Venezuelan equine encephalitis virus VLP in complex with the LDLRAD3 receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Capsid, ...
著者Basore, K, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-05-27
公開日2021-10-13
最終更新日2021-11-10
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure of Venezuelan equine encephalitis virus in complex with the LDLRAD3 receptor.
Nature, 598, 2021
2FWO
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MHC Class I H-2Kd heavy chain in complex with beta-2microglobulin and peptide derived from influenza nucleoprotein
分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-D alpha chain, ...
著者Mitaksov, V, Fremont, D.H.
登録日2006-02-02
公開日2006-02-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Definition of the H-2Kd Peptide-binding Motif.
J.Biol.Chem., 281, 2006
7K9I
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SARS-CoV-2 Spike RBD in complex with neutralizing Fab 2B04 (local refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2B04 heavy chain, 2B04 light chain, ...
著者Errico, J.M, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-09-29
公開日2021-09-29
最終更新日2021-11-10
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural mechanism of SARS-CoV-2 neutralization by two murine antibodies targeting the RBD.
Cell Rep, 37, 2021
2GRK
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Crystal structure of ectromelia virus EVM1 chemokine binding protein
分子名称: EVM001
著者Arnold, P.L, Fremont, D.H.
登録日2006-04-24
公開日2006-05-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural determinants of chemokine binding by an ectromelia virus-encoded decoy receptor.
J.Virol., 80, 2006
6PLK
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BU of 6plk by Molmil
Crystal structure of ZIKV-116 Fab in complex with ZIKV envelope DIII
分子名称: Env, ZIKV-116 heavy chain, ZIKV-116 light chain
著者Zhao, H, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-07-01
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mechanism of differential Zika and dengue virus neutralization by a public antibody lineage targeting the DIII lateral ridge.
J.Exp.Med., 217, 2020
5ANY
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BU of 5any by Molmil
Electron cryo-microscopy of chikungunya virus in complex with neutralizing antibody Fab CHK265
分子名称: E1, E2, FAB, ...
著者Fox, J.M, Long, F, Edeling, M.A, Lin, H, Duijl-Richter, M, Fong, R.H, Kahle, K.M, Smit, J.M, Jin, J, Simmons, G, Doranz, B.J, Crowe, J.E, Fremont, D.H, Rossmann, M.G, Diamond, M.S.
登録日2015-09-08
公開日2015-11-25
最終更新日2018-10-03
実験手法ELECTRON MICROSCOPY (16.9 Å)
主引用文献Broadly Neutralizing Alphavirus Antibodies Bind an Epitope on E2 and Inhibit Entry and Egress.
Cell(Cambridge,Mass.), 163, 2015
4PDC
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BU of 4pdc by Molmil
Crystal structure of Cowpox virus CPXV018 (OMCP) bound to human NKG2D
分子名称: CPXV018 protein, NKG2-D type II integral membrane protein
著者Lazear, E, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-04-17
公開日2014-05-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.991 Å)
主引用文献Structural basis of cowpox evasion of NKG2D immunosurveillance
Biorxiv, 2019
4OIG
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BU of 4oig by Molmil
Dengue Virus Non-structural Protein NS1
分子名称: Non-structural protein 1, NS1, SULFATE ION
著者Edeling, M.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-01-19
公開日2014-03-05
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural basis of Flavivirus NS1 assembly and antibody recognition.
Proc.Natl.Acad.Sci.USA, 111, 2014
7JX6
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BU of 7jx6 by Molmil
STRUCTURE OF THE SARS-CoV-2 ORF8 ENCODED ACCESSORY PROTEIN
分子名称: ORF8 protein, SODIUM ION
著者Hall, P.D, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-08-26
公開日2020-09-23
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Crystal Structure of the SARS-CoV-2 ORF8 Protein
To Be Published
7KYL
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Powassan virus Envelope protein DIII in complex with neutralizing Fab POWV-80
分子名称: CHLORIDE ION, Envelope protein domain III, POWV-80 Fab heavy chain, ...
著者Errico, J.M, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-12-08
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Broadly neutralizing monoclonal antibodies protect against multiple tick-borne flaviviruses.
J.Exp.Med., 218, 2021
4OII
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West Nile Virus NS1 in complex with neutralizing 22NS1 antibody Fab
分子名称: Heavy Chain of Fab fragment of 22NS1 Antibody, Light Chain of Fab fragment of 22NS1 Antibody, NON-STRUCTURAL PROTEIN NS1
著者Edeling, M.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-01-19
公開日2014-03-05
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of Flavivirus NS1 assembly and antibody recognition.
Proc.Natl.Acad.Sci.USA, 111, 2014
1ZTX
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West Nile Virus Envelope Protein DIII in complex with neutralizing E16 antibody Fab
分子名称: Envelope protein, Heavy Chain of E16 Antibody, Light Chain of E16 Antibody
著者Nybakken, G.E, Oliphant, T, Diamond, M.S, Fremont, D.H.
登録日2005-05-27
公開日2005-10-04
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of West Nile virus neutralization by a therapeutic antibody.
Nature, 437, 2005
4OIE
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West Nile Virus Non-structural Protein NS1
分子名称: GLYCEROL, NON-STRUCTURAL PROTEIN NS1
著者Edeling, M.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-01-19
公開日2014-03-05
最終更新日2014-04-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis of Flavivirus NS1 assembly and antibody recognition.
Proc.Natl.Acad.Sci.USA, 111, 2014
1XAK
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STRUCTURE OF THE SARS-CORONAVIRUS ORF7A ACCESSORY PROTEIN
分子名称: SARS ORF7A ACCESSORY PROTEIN
著者Nelson, C.A, Lee, C.A, Fremont, D.H, Midwest Center for Structural Genomics (MCSG)
登録日2004-08-26
公開日2004-10-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and intracellular targeting of the SARS-coronavirus Orf7a accessory protein.
Structure, 13, 2005
1ZOX
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CLM-1 Mouse Myeloid Receptor Extracellular Domain
分子名称: CLM-1
著者Nelson, C.N, Burton, R.L, Fremont, D.H, Midwest Center for Structural Genomics (MCSG)
登録日2005-05-15
公開日2005-05-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of the Mouse CLM-1 Ectodomain
To be Published
4GIQ
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Crystal Structure of mouse RANK bound to RANKL
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, SODIUM ION, ...
著者Nelson, C.A, Wang, M.W.-H, Fremont, D.H.
登録日2012-08-08
公開日2012-10-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献RANKL Employs Distinct Binding Modes to Engage RANK and the Osteoprotegerin Decoy Receptor.
Structure, 20, 2012

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