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PDB: 103 results

4IMF
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Crystal Structure of Pasteurella multocida N-Acetyl-D-Neuraminic acid lyase K164 mutant complexed with N-Acetylneuraminic acid
Descriptor: 1-ETHOXY-2-(2-METHOXYETHOXY)ETHANE, 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-2-ulosonic acid, CHLORIDE ION, ...
Authors:Fisher, A.J, Huynh, N.
Deposit date:2013-01-02
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Substrate Specificity and Mechanism of N-Acetyl-d-neuraminic Acid Lyase from Pasteurella multocida.
Biochemistry, 52, 2013
4IMD
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Crystal Structure of Pasteurella multocida N-Acetyl-D-Neuraminic acid lyase trapped with pyruvate covalently bound through a Schiff base to Lys164
Descriptor: 1,2-ETHANEDIOL, N-acetylneuraminate lyase, PHOSPHATE ION
Authors:Fisher, A.J, Huynh, N.
Deposit date:2013-01-02
Release date:2013-11-06
Last modified:2013-12-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for Substrate Specificity and Mechanism of N-Acetyl-d-neuraminic Acid Lyase from Pasteurella multocida.
Biochemistry, 52, 2013
4IMC
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Crystal Structure of Pasteurella multocida N-Acetyl-D-Neuraminic acid lyase
Descriptor: 1,2-ETHANEDIOL, N-acetylneuraminate lyase, PHOSPHATE ION
Authors:Fisher, A.J, Huynh, N.
Deposit date:2013-01-02
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis for Substrate Specificity and Mechanism of N-Acetyl-d-neuraminic Acid Lyase from Pasteurella multocida.
Biochemistry, 52, 2013
4IME
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Crystal Structure of Pasteurella multocida N-Acetyl-D-Neuraminic acid lyase K164A Mutant
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 1-ETHOXY-2-(2-METHOXYETHOXY)ETHANE, N-acetylneuraminate lyase
Authors:Fisher, A.J, Huynh, N.
Deposit date:2013-01-02
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Substrate Specificity and Mechanism of N-Acetyl-d-neuraminic Acid Lyase from Pasteurella multocida.
Biochemistry, 52, 2013
2II6
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Crystal structure of Pasteurella multocida sialyltransferase D141N mutant in open conformation with CMP bound
Descriptor: Alpha-2,3/2,6-sialyltransferase/sialidase, CYTIDINE-5'-MONOPHOSPHATE
Authors:Fisher, A.J, Ni, L.
Deposit date:2006-09-27
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural analysis of multifunctional sialyltransferase from Pasteurella multocida.
To be Published
2NN3
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structure of pro-sf-caspase-1
Descriptor: Caspase-1
Authors:Fisher, A.J, Ni, L.
Deposit date:2006-10-23
Release date:2007-10-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Pro-sfcapsase-1, structural insights into activation mechanism of caspases
To be Published
5ED1
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BU of 5ed1 by Molmil
Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from S. cerevisiae BDF2 gene
Descriptor: Double-stranded RNA-specific editase 1, INOSITOL HEXAKISPHOSPHATE, RNA (5'-R(*GP*AP*CP*UP*GP*AP*AP*CP*GP*AP*CP*CP*AP*AP*UP*GP*UP*GP*GP*GP*GP*AP*A)-3'), ...
Authors:Matthews, M.M, Fisher, A.J, Beal, P.A.
Deposit date:2015-10-20
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structures of human ADAR2 bound to dsRNA reveal base-flipping mechanism and basis for site selectivity.
Nat.Struct.Mol.Biol., 23, 2016
2G18
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Crystal Structure of Nostoc sp. 7120 phycocyanobilin:ferredoxin oxidoreductase (PcyA) Apoprotein
Descriptor: CALCIUM ION, Phycocyanobilin:ferredoxin oxidoreductase
Authors:Tu, S.-L, Lagarias, J.C, Fisher, A.J.
Deposit date:2006-02-13
Release date:2006-12-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insight into the radical mechanism of phycocyanobilin-ferredoxin oxidoreductase (PcyA) revealed by X-ray crystallography and biochemical measurements.
Biochemistry, 46, 2007
1M7G
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Crystal structure of APS kinase from Penicillium Chrysogenum: Ternary structure with ADP and APS
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE-2',3'-VANADATE, ADENOSINE-5'-PHOSPHOSULFATE, ...
Authors:Lansdon, E.B, Segel, I.H, Fisher, A.J.
Deposit date:2002-07-19
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Ligand-Induced Structural Changes in Adenosine 5'-Phosphosulfate Kinase from Penicillium chrysogenum.
Biochemistry, 41, 2002
1M7H
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BU of 1m7h by Molmil
Crystal Structure of APS kinase from Penicillium Chrysogenum: Structure with APS soaked out of one dimer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-PHOSPHOSULFATE, Adenylylsulfate kinase, ...
Authors:Lansdon, E.B, Sege, I.H, Fisher, A.J.
Deposit date:2002-07-19
Release date:2002-11-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand-Induced Structural Changes in Adenosine 5'-Phosphosulfate Kinase from Penicillium chrysogenum.
Biochemistry, 41, 2002
1M8P
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Crystal Structure of P. chrysogenum ATP Sulfurylase in the T-state
Descriptor: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, sulfate adenylyltransferase
Authors:MacRae, I.J, Segel, I.H, Fisher, A.J.
Deposit date:2002-07-25
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Allosteric Inhibition via R-State Destabilization in ATP Sulfurylase from Penicillium chrysogenum
Nat.Struct.Biol., 9, 2002
1M0O
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BU of 1m0o by Molmil
Structure of Dialkylglycine Decarboxylase Complexed with 1-Amino-1-methylpropanephosphonate
Descriptor: (1R)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]-1-METHYLPROPYLPHOSPHONIC ACID, 2,2-Dialkylglycine decarboxylase, POTASSIUM ION, ...
Authors:Liu, W, Rogers, C.J, Fisher, A.J, Toney, M.D.
Deposit date:2002-06-13
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Aminophosphonate Inhibitors of Dialkylglycine Decarboxylase: Structural Basis for Slow Binding Inhibition
Biochemistry, 41, 2002
1M72
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BU of 1m72 by Molmil
Crystal Structure of Caspase-1 from Spodoptera frugiperda
Descriptor: 1,2-ETHANEDIOL, Ace-Asp-Glu-Val-Asp-chloromethylketone, Caspase-1
Authors:Forsyth, C.M, Lemongello, D, Friesen, P.D, Fisher, A.J.
Deposit date:2002-07-18
Release date:2004-01-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of an invertebrate caspase.
J.Biol.Chem., 279, 2004
8E0F
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BU of 8e0f by Molmil
Human Adenosine Deaminase Acting on dsRNA (ADAR2-RD) bound to dsRNA containing a G-G pair adjacent to the target site
Descriptor: Double-stranded RNA-specific editase 1, INOSITOL HEXAKISPHOSPHATE, RNA (5-R(*GP*CP*UP*CP*GP*CP*GP*AP*UP*GP*CP*GP*(8AZ)P*GP*AP*GP*GP*GP*CP* UP*CP*UP*GP*AP*UP*AP*GP*CP*UP*AP*CP*G)-3), ...
Authors:Wilcox, X.E, Fisher, A.J, Beal, P.A.
Deposit date:2022-08-09
Release date:2022-10-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:ADAR activation by inducing a syn conformation at guanosine adjacent to an editing site.
Nucleic Acids Res., 50, 2022
5XEP
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BU of 5xep by Molmil
Crystal structure of BRP39, a chitinase-like protein, at 2.6 Angstorm resolution
Descriptor: 1,2-ETHANEDIOL, Chitinase-3-like protein 1
Authors:Mohanty, A.K, Fisher, A.J, Choudhary, S, Kaushik, J.K.
Deposit date:2017-04-05
Release date:2018-04-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of BRP39, a signalling glycoprotein expressed during mammary gland apoptosis.
To be published
6VFF
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Dimer of Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from human GLI1 gene
Descriptor: Double-stranded RNA-specific editase 1, INOSITOL HEXAKISPHOSPHATE, RNA (5-R(*GP*CP*UP*CP*GP*CP*GP*AP*UP*GP*CP*UP*(8AZ)P*GP*AP*GP*GP*GP*CP* UP*CP*UP*GP*AP*UP*AP*GP*CP*UP*AP*CP*G)-3), ...
Authors:Thuy-boun, A.S, Fisher, A.J, Beal, P.A.
Deposit date:2020-01-03
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Asymmetric dimerization of adenosine deaminase acting on RNA facilitates substrate recognition.
Nucleic Acids Res., 48, 2020
5HP2
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BU of 5hp2 by Molmil
Human Adenosine Deaminase Acting on dsRNA (ADAR2) bound to dsRNA sequence derived from S. cerevisiae BDF2 gene with AU basepair at reaction site
Descriptor: Double-stranded RNA-specific editase 1, INOSITOL HEXAKISPHOSPHATE, RNA (5'-R(*GP*AP*CP*UP*GP*AP*AP*CP*GP*AP*CP*UP*AP*AP*UP*GP*UP*GP*GP*GP*GP*AP*A)-3'), ...
Authors:Matthews, M.M, Fisher, A.J, Beal, P.A.
Deposit date:2016-01-20
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.983 Å)
Cite:Structures of human ADAR2 bound to dsRNA reveal base-flipping mechanism and basis for site selectivity.
Nat.Struct.Mol.Biol., 23, 2016
5HP3
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BU of 5hp3 by Molmil
Human Adenosine Deaminase Acting on dsRNA (ADAR2) bound to dsRNA sequence derived from S. cerevisiae BDF2 gene with AC mismatch at reaction site
Descriptor: Double-stranded RNA-specific editase 1, INOSITOL HEXAKISPHOSPHATE, RNA (5'-R(*GP*AP*CP*UP*GP*AP*AP*CP*GP*AP*CP*CP*AP*AP*UP*GP*UP*GP*GP*GP*GP*AP*A)-3'), ...
Authors:Matthews, M.M, Fisher, A.J, Beal, P.A.
Deposit date:2016-01-20
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.091 Å)
Cite:Structures of human ADAR2 bound to dsRNA reveal base-flipping mechanism and basis for site selectivity.
Nat.Struct.Mol.Biol., 23, 2016
4R36
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Crystal structure analysis of LpxA, a UDP-N-acetylglucosamine acyltransferase from Bacteroides fragilis 9343
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ACETATE ION, ...
Authors:Ngo, A, Fong, K, Cox, D, Fisher, A, Chen, X.
Deposit date:2014-08-14
Release date:2015-05-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of Bacteroides fragilis uridine 5'-diphosphate-N-acetylglucosamine (UDP-GlcNAc) acyltransferase (BfLpxA).
Acta Crystallogr.,Sect.D, 71, 2015
7KFN
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BU of 7kfn by Molmil
Structure of Human Adenosine Deaminase Acting on dsRNA (ADAR2) bound to dsRNA containing a 2'-deoxy Benner's Base Z opposite the edited base
Descriptor: Double-stranded RNA-specific editase 1, Gli1 1W5 23mer RNA, Gli1 8AZ 23mer RNA, ...
Authors:Wilcox, X.E, Fisher, A.J, Beal, P.A.
Deposit date:2020-10-14
Release date:2021-06-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Rational Design of RNA Editing Guide Strands: Cytidine Analogs at the Orphan Position.
J.Am.Chem.Soc., 143, 2021
1NC2
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BU of 1nc2 by Molmil
Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Y-DOTA
Descriptor: (S)-2-(4-(2-(2-HYDROXYETHYLTHIO)-ACETAMIDO)-BENZYL)-1,4,7,10-TETRAAZACYCLODODECANE-N,N',N'',N'''-TETRAACETATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Corneillie, T.M, Fisher, A.J, Meares, C.F.
Deposit date:2002-12-04
Release date:2003-12-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of two complexes of the rare-earth-DOTA-binding antibody 2D12.5: ligand generality from a chiral system.
J.Am.Chem.Soc., 125, 2003
1NC4
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BU of 1nc4 by Molmil
Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Gd-DOTA
Descriptor: (S)-2-(4-NITROBENZYL)-1,4,7,10-TETRAAZACYCLODODECANE-N,N',N'',N'''-TETRAACETATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Corneillie, T.M, Fisher, A.J, Meares, C.F.
Deposit date:2002-12-04
Release date:2003-12-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structures of two complexes of the rare-earth-DOTA-binding antibody 2D12.5: ligand generality from a chiral system.
J.Am.Chem.Soc., 125, 2003
3CS1
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BU of 3cs1 by Molmil
Flagellar Calcium-binding Protein (FCaBP) from T. cruzi
Descriptor: Flagellar calcium-binding protein
Authors:Ames, J.B, Ladner, J.E, Wingard, J.N, Robinson, H, Fisher, A.
Deposit date:2008-04-08
Release date:2008-06-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insights into Membrane Targeting by the Flagellar Calcium-binding Protein (FCaBP), a Myristoylated and Palmitoylated Calcium Sensor in Trypanosoma cruzi.
J.Biol.Chem., 283, 2008
6XHG
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Far-red absorbing dark state of JSC1_58120g3 with bound biliverdin IXa (BV)
Descriptor: 1,2-ETHANEDIOL, 3-[2-[(~{Z})-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(~{Z})-(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, JSC1_58120g3
Authors:Moreno, M.V, Rockwell, N.C, Fisher, A.J, Lagarias, J.C.
Deposit date:2020-06-18
Release date:2020-10-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A far-red cyanobacteriochrome lineage specific for verdins.
Proc.Natl.Acad.Sci.USA, 117, 2020
1I3S
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BU of 1i3s by Molmil
THE 2.7 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF A MUTATED BACULOVIRUS P35 AFTER CASPASE CLEAVAGE
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, EARLY 35 KDA PROTEIN
Authors:dela Cruz, W.P, Lemongello, D, Friesen, P.D, Fisher, A.J.
Deposit date:2001-02-15
Release date:2001-10-24
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of baculovirus P35 reveals a novel conformational change in the reactive site loop after caspase cleavage.
J.Biol.Chem., 276, 2001

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