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PDB: 239 件
4RLE
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BU of 4rle by Molmil
Crystal structure of the c-di-AMP binding PII-like protein DarA
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, NICKEL (II) ION, Uncharacterized protein YaaQ
著者Dickmanns, A, Neumann, P, Ficner, R.
登録日2014-10-16
公開日2014-12-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Identification, Characterization, and Structure Analysis of the Cyclic di-AMP-binding PII-like Signal Transduction Protein DarA.
J.Biol.Chem., 290, 2015
4TMW
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BU of 4tmw by Molmil
Translation initiation factor eIF5B (517-858) from C. thermophilum, bound to GTP and Sodium
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SODIUM ION, ...
著者Kuhle, B, Ficner, R.
登録日2014-06-02
公開日2014-09-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A monovalent cation acts as structural and catalytic cofactor in translational GTPases.
Embo J., 33, 2014
4TMT
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BU of 4tmt by Molmil
Translation initiation factor eIF5B (517-858) mutant D533A from C. thermophilum, bound to GTPgammaS
分子名称: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, ...
著者Kuhle, B, Ficner, R.
登録日2014-06-02
公開日2014-09-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献A monovalent cation acts as structural and catalytic cofactor in translational GTPases.
Embo J., 33, 2014
4TMZ
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BU of 4tmz by Molmil
Translation initiation factor eIF5B (517-858) from C. thermophilum, bound to GTPgammaS and potassium
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
著者Kuhle, B, Ficner, R.
登録日2014-06-02
公開日2014-09-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献A monovalent cation acts as structural and catalytic cofactor in translational GTPases.
Embo J., 33, 2014
4TMX
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BU of 4tmx by Molmil
Translation initiation factor eIF5B (517-858) mutant D533N from C. thermophilum, bound to GTP and sodium
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Kuhle, B, Ficner, R.
登録日2014-06-02
公開日2014-09-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A monovalent cation acts as structural and catalytic cofactor in translational GTPases.
Embo J., 33, 2014
4KR9
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BU of 4kr9 by Molmil
Crystal structure of a 4-thiouridine synthetase - RNA complex at 3.5 Angstrom resolution
分子名称: Probable tRNA sulfurtransferase, RNA (39-MER)
著者Neumann, P, Ficner, R, Lakomek, K.
登録日2013-05-16
公開日2014-04-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of a 4-thiouridine synthetase-RNA complex reveals specificity of tRNA U8 modification.
Nucleic Acids Res., 42, 2014
4N6R
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BU of 4n6r by Molmil
Crystal structure of VosA-VelB-complex
分子名称: SULFATE ION, VelB, VosA
著者Ahmed, Y.L, Dickmanns, A, Neumann, P, Ficner, R.
登録日2013-10-14
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Velvet Family of Fungal Regulators Contains a DNA-Binding Domain Structurally Similar to NF-kappa B.
Plos Biol., 11, 2013
3G38
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The catalytically inactive mutant Mth0212 (D151N) in complex with an 8 bp dsDNA
分子名称: 5'-D(*CP*CP*TP*GP*UP*GP*CP*GP*AP*T)-3', 5'-D(*CP*GP*CP*GP*CP*AP*GP*GP*C)-3', Exodeoxyribonuclease, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-02-02
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
4N3S
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BU of 4n3s by Molmil
Crystal structure of eukaryotic translation initiation factor eIF5B (399-852) from Saccharomyces cerevisiae, apo form
分子名称: 1,2-ETHANEDIOL, Eukaryotic translation initiation factor 5B, GLYCEROL
著者Kuhle, B, Ficner, R.
登録日2013-10-07
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.832 Å)
主引用文献eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining.
Embo J., 33, 2014
4N3G
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BU of 4n3g by Molmil
Crystal structure of eukaryotic translation initiation factor eIF5B (870-1116) from Chaetomium thermophilum, domains III and IV
分子名称: CHLORIDE ION, Eukaryotic translation initiation factor 5B-like protein, eIF5B(870-C), ...
著者Kuhle, B, Ficner, R.
登録日2013-10-07
公開日2014-07-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.203 Å)
主引用文献eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining.
Embo J., 33, 2014
4KR7
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BU of 4kr7 by Molmil
Crystal structure of a 4-thiouridine synthetase - RNA complex with bound ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Probable tRNA sulfurtransferase, ...
著者Neumann, P, Ficner, R, Lakomek, K.
登録日2013-05-16
公開日2014-04-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.421 Å)
主引用文献Crystal structure of a 4-thiouridine synthetase-RNA complex reveals specificity of tRNA U8 modification.
Nucleic Acids Res., 42, 2014
4KR6
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BU of 4kr6 by Molmil
Crystal structure of a 4-thiouridine synthetase - RNA complex
分子名称: MERCURY (II) ION, Probable tRNA sulfurtransferase, RNA (39-MER)
著者Neumann, P, Ficner, R, Lakomek, K.
登録日2013-05-16
公開日2014-04-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of a 4-thiouridine synthetase-RNA complex reveals specificity of tRNA U8 modification.
Nucleic Acids Res., 42, 2014
4NCN
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BU of 4ncn by Molmil
Crystal structure of eukaryotic translation initiation factor eIF5B (517-858) from Chaetomium thermophilum in complex with GTP
分子名称: ACETIC ACID, Eukaryotic translation initiation factor 5B-like protein, GLYCEROL, ...
著者Kuhle, B, Ficner, R.
登録日2013-10-24
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining.
Embo J., 33, 2014
4NCL
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BU of 4ncl by Molmil
Crystal structure of eukaryotic translation initiation factor eIF5B (517-970) from Chaetomium thermophilum in complex with GDP
分子名称: Eukaryotic translation initiation factor 5B-like protein, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Kuhle, B, Ficner, R.
登録日2013-10-24
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.115 Å)
主引用文献eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining.
Embo J., 33, 2014
4N3N
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BU of 4n3n by Molmil
Crystal structure of eukaryotic translation initiation factor eIF5B (517-1116) from Chaetomium thermophilum, apo form
分子名称: Eukaryotic translation initiation factor 5B-like protein, eIF5B(517-C), LACTIC ACID
著者Kuhle, B, Ficner, R.
登録日2013-10-07
公開日2014-07-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.752 Å)
主引用文献eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining.
Embo J., 33, 2014
4NWI
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BU of 4nwi by Molmil
Crystal structure of cytosolic 5'-nucleotidase IIIB (cN-IIIB) bound to cytidine
分子名称: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, 7-methylguanosine phosphate-specific 5'-nucleotidase, CHLORIDE ION, ...
著者Monecke, T, Neumann, P, Ficner, R.
登録日2013-12-06
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal Structures of the Novel Cytosolic 5'-Nucleotidase IIIB Explain Its Preference for m7GMP
Plos One, 9, 2014
4NCF
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BU of 4ncf by Molmil
Crystal structure of eukaryotic translation initiation factor eIF5B (399-852) from Saccharomyces cerevisiae in complex with GDP
分子名称: Eukaryotic translation initiation factor 5B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Kuhle, B, Ficner, R.
登録日2013-10-24
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.015 Å)
主引用文献eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining.
Embo J., 33, 2014
4K51
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BU of 4k51 by Molmil
Crystal Structure of the PCI domain of eIF3a
分子名称: Eukaryotic translation initiation factor 3 subunit A
著者Khoshnevis, S, Neumann, P, Ficner, R.
登録日2013-04-12
公開日2014-01-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural integrity of the PCI domain of eIF3a/TIF32 is required for mRNA recruitment to the 43S pre-initiation complexes.
Nucleic Acids Res., 42, 2014
4NOX
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BU of 4nox by Molmil
Structure of the nine-bladed beta-propeller of eIF3b
分子名称: CHLORIDE ION, Eukaryotic translation initiation factor 3 subunit B
著者Liu, Y, Neumann, P, Kuhle, B, Monecke, T, Ficner, R.
登録日2013-11-20
公開日2014-09-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.722 Å)
主引用文献Translation initiation factor eIF3b contains a nine-bladed beta-propeller and interacts with the 40S ribosomal subunit
Structure, 22, 2014
4NV0
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BU of 4nv0 by Molmil
Crystal structure of cytosolic 5'-nucleotidase IIIB (cN-IIIB) bound to 7-methylguanosine
分子名称: 7-METHYLGUANOSINE, 7-methylguanosine phosphate-specific 5'-nucleotidase, MAGNESIUM ION, ...
著者Monecke, T, Neumann, P, Ficner, R.
登録日2013-12-04
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structures of the Novel Cytosolic 5'-Nucleotidase IIIB Explain Its Preference for m7GMP
Plos One, 9, 2014
4N6Q
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BU of 4n6q by Molmil
Crystal structure of VosA velvet domain
分子名称: IODIDE ION, NITRATE ION, VosA
著者Ahmed, Y.L, Dickmanns, A, Neumann, P, Ficner, R.
登録日2013-10-14
公開日2014-01-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The Velvet Family of Fungal Regulators Contains a DNA-Binding Domain Structurally Similar to NF-kappa B.
Plos Biol., 11, 2013
3FBX
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BU of 3fbx by Molmil
Crystal structure of the lysosomal 66.3 kDa protein from mouse solved by S-SAD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Lakomek, K, Dickmanns, A, Mueller, U, Ficner, R.
登録日2008-11-20
公開日2009-03-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献De novo sulfur SAD phasing of the lysosomal 66.3 kDa protein from mouse
Acta Crystallogr.,Sect.D, 65, 2009
3CTR
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BU of 3ctr by Molmil
Crystal structure of the RRM-domain of the poly(A)-specific ribonuclease PARN bound to m7GTP
分子名称: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, Poly(A)-specific ribonuclease PARN
著者Monecke, T, Schell, S, Dickmanns, A, Ficner, R.
登録日2008-04-14
公開日2008-07-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the RRM domain of poly(A)-specific ribonuclease reveals a novel m(7)G-cap-binding mode.
J.Mol.Biol., 382, 2008
3G2D
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BU of 3g2d by Molmil
Complex of Mth0212 and a 4 bp dsDNA with 3'-overhang
分子名称: 5'-D(*CP*CP*TP*GP*UP*GP*CP*GP*AP*T)-3', 5'-D(*CP*GP*CP*G*CP*AP*GP*GP*C)-3', Exodeoxyribonuclease, ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-01-31
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G00
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Mth0212 in complex with a 9bp blunt end dsDNA at 1.7 Angstrom
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5'-D(*CP*GP*TP*AP*TP*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*UP*TP*AP*CP*G)-3', ...
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-01-27
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010

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