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PDB: 351 results

3V5F
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BU of 3v5f by Molmil
Crystal structure of the mutant E234A of Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein
Authors:Fedorov, A.A, Fedorov, E.V, Groninger-Poe, F, Gerlt, J.A, Almo, S.C.
Deposit date:2011-12-16
Release date:2012-12-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the mutant E234A of Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg
To be Published
3SBF
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BU of 3sbf by Molmil
Crystal structure of the mutant P311A of enolase superfamily member from VIBRIONALES BACTERIUM complexed with Mg and D-Arabinonate
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-arabinonic acid, MAGNESIUM ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
Deposit date:2011-06-04
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the mutant P311A of enolase superfamily member from Vibrionales bacterium complexed with Mg and D-Arabinonate
To be Published
3SIZ
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BU of 3siz by Molmil
Crystal structure of the mutant S127A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
Deposit date:2011-06-20
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.321 Å)
Cite:Crystal structure of the mutant S127A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP
To be Published
3SY5
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Crystal structure of the mutant S127A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor 6azaUMP
Descriptor: 6-AZA URIDINE 5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Desai, B, Iiams, V, Gerlt, J.A, Almo, S.C.
Deposit date:2011-07-15
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.321 Å)
Cite:Crystal structure of the mutant S127A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor 6azaUMP
To be Published
3VE9
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Crystal structure of orotidine 5'-monophosphate decarboxylase from Metallosphaera sedula
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Orotidine-5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
Deposit date:2012-01-07
Release date:2013-01-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of orotidine 5'-monophosphate decarboxylase from Metallosphaera sedula
To be Published
3V1P
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BU of 3v1p by Molmil
Crystal structure of the mutant Q185A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase, SULFATE ION
Authors:Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
Deposit date:2011-12-09
Release date:2012-11-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012
3VE7
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BU of 3ve7 by Molmil
Crystal structure of orotidine 5'-monophosphate decarboxylase from Metallosphaera sedula complexed with inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, ACETIC ACID, Orotidine-5'-phosphate decarboxylase, ...
Authors:Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
Deposit date:2012-01-07
Release date:2013-01-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.539 Å)
Cite:Crystal structure of orotidine 5'-monophosphate decarboxylase from Metallosphaera sedula complexed with inhibitor BMP
To be Published
3V5C
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BU of 3v5c by Molmil
Crystal structure of the mutant E234A of Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg
Descriptor: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein
Authors:Fedorov, A.A, Fedorov, E.V, Groninger-Poe, F, Gerlt, J.A, Almo, S.C.
Deposit date:2011-12-16
Release date:2012-12-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Crystal structure of the mutant E234A of Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg
To be Published
3VCC
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BU of 3vcc by Molmil
CRYSTAL STRUCTURE OF D-Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg
Descriptor: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein
Authors:Fedorov, A.A, Fedorov, E.V, Groninger-Poe, F, Gerlt, J.A, Almo, S.C.
Deposit date:2012-01-03
Release date:2013-01-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:CRYSTAL STRUCTURE OF D-Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg
To be Published
2QJJ
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BU of 2qjj by Molmil
Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans
Descriptor: MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme
Authors:Fedorov, A.A, Fedorov, E.V, Rakus, J.F, Vick, J.E, Gerlt, J.A, Almo, S.C.
Deposit date:2007-07-07
Release date:2007-10-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: D-Mannonate dehydratase from Novosphingobium aromaticivorans.
Biochemistry, 46, 2007
2QJN
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Crystal structure of D-mannonate dehydratase from Novosphingobium aromaticivorans complexed with Mg and 2-keto-3-deoxy-D-gluconate
Descriptor: 2-KETO-3-DEOXYGLUCONATE, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme
Authors:Fedorov, A.A, Fedorov, E.V, Rakus, J.F, Vick, J.E, Gerlt, J.A, Almo, S.C.
Deposit date:2007-07-08
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: D-Mannonate dehydratase from Novosphingobium aromaticivorans.
Biochemistry, 46, 2007
2QJM
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BU of 2qjm by Molmil
Crystal structure of the K271E mutant of Mannonate dehydratase from Novosphingobium aromaticivorans complexed with Mg and D-mannonate
Descriptor: D-MANNONIC ACID, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme
Authors:Fedorov, A.A, Fedorov, E.V, Rakus, J.F, Vick, J.E, Gerlt, J.A, Almo, S.C.
Deposit date:2007-07-08
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: D-Mannonate dehydratase from Novosphingobium aromaticivorans.
Biochemistry, 46, 2007
2RAG
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BU of 2rag by Molmil
Crystal structure of aminohydrolase from Caulobacter crescentus
Descriptor: CHLORIDE ION, Dipeptidase, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-09-14
Release date:2007-10-02
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of aminohydrolase from Caulobacter crescentus.
To be Published
2FLI
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BU of 2fli by Molmil
The crystal structure of D-ribulose 5-phosphate 3-epimerase from Streptococus pyogenes complexed with D-xylitol 5-phosphate
Descriptor: D-XYLITOL-5-PHOSPHATE, ZINC ION, ribulose-phosphate 3-epimerase
Authors:Fedorov, A.A, Fedorov, E.V, Akana, J, Gerlt, J.A, Almo, S.C.
Deposit date:2006-01-06
Release date:2006-03-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:d-Ribulose 5-Phosphate 3-Epimerase: Functional and Structural Relationships to Members of the Ribulose-Phosphate Binding (beta/alpha)(8)-Barrel Superfamily(,).
Biochemistry, 45, 2006
2DW6
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BU of 2dw6 by Molmil
Crystal structure of the mutant K184A of D-Tartrate Dehydratase from Bradyrhizobium japonicum complexed with Mg++ and D-tartrate
Descriptor: Bll6730 protein, D(-)-TARTARIC ACID, L(+)-TARTARIC ACID, ...
Authors:Fedorov, A.A, Fedorov, E.V, Yew, W.S, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2006-08-07
Release date:2006-12-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evolution of Enzymatic Activities in the Enolase Superfamily: d-Tartrate Dehydratase from Bradyrhizobium japonicum
Biochemistry, 45, 2006
2DW7
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BU of 2dw7 by Molmil
Crystal structure of D-tartrate dehydratase from Bradyrhizobium japonicum complexed with Mg++ and meso-tartrate
Descriptor: Bll6730 protein, MAGNESIUM ION, S,R MESO-TARTARIC ACID
Authors:Fedorov, A.A, Fedorov, E.V, Yew, W.S, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2006-08-07
Release date:2006-12-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Evolution of Enzymatic Activities in the Enolase Superfamily: d-Tartrate Dehydratase from Bradyrhizobium japonicum
Biochemistry, 45, 2006
1NLX
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BU of 1nlx by Molmil
Crystal Structure of PHL P 6, A Major Timothy Grass Pollen Allergen Co-Crystallized with Zinc
Descriptor: ARSENIC, Pollen allergen Phl p 6, ZINC ION
Authors:Fedorov, A.A, Ball, T, Fedorov, E.V, Vrtala, S, Valenta, R, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-01-07
Release date:2003-01-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure oh Phl p 6, a major timothy grass pollen allergen co-crystallized with Zinc
To be Published
1B8N
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BU of 1b8n by Molmil
PURINE NUCLEOSIDE PHOSPHORYLASE
Descriptor: 1,4-DIDEOXY-1,4-IMINO-1-(S)-(9-DEAZAGUANIN-9-YL)-D-RIBITOL, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Fedorov, A.A, Kicska, G.A, Fedorov, E.V, Strokopytov, B.V, Tyler, P.C, Furneaux, R.H, Schramm, V.L, Almo, S.C.
Deposit date:1999-02-02
Release date:1999-02-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Atomic dissection of the hydrogen bond network for transition-state analogue binding to purine nucleoside phosphorylase
Biochemistry, 41, 2002
1B8O
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BU of 1b8o by Molmil
PURINE NUCLEOSIDE PHOSPHORYLASE
Descriptor: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Fedorov, A.A, Kicska, G.A, Fedorov, E.V, Shi, W, Tyler, P.C, Furneaux, R.H, Schramm, V.L, Almo, S.C.
Deposit date:1999-02-02
Release date:1999-02-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Transition state structure of purine nucleoside phosphorylase and principles of atomic motion in enzymatic catalysis.
Biochemistry, 40, 2001
1COF
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BU of 1cof by Molmil
YEAST COFILIN, ORTHORHOMBIC CRYSTAL FORM
Descriptor: COFILIN
Authors:Fedorov, A.A, Lappalainen, P, Fedorov, E.V, Drubin, D.G, Almo, S.C.
Deposit date:1996-11-26
Release date:1997-04-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure determination of yeast cofilin.
Nat.Struct.Biol., 4, 1997
1CFY
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BU of 1cfy by Molmil
YEAST COFILIN, MONOCLINIC CRYSTAL FORM
Descriptor: COFILIN
Authors:Fedorov, A.A, Lappalainen, P, Fedorov, E.V, Drubin, D.G, Almo, S.C.
Deposit date:1996-11-26
Release date:1997-04-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure determination of yeast cofilin.
Nat.Struct.Biol., 4, 1997
1QC6
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BU of 1qc6 by Molmil
EVH1 domain from ENA/VASP-like protein in complex with ACTA peptide
Descriptor: EVH1 DOMAIN FROM ENA/VASP-LIKE PROTEIN, PHE-GLU-PHE-PRO-PRO-PRO-PRO-THR-ASP-GLU-GLU
Authors:Fedorov, A.A, Fedorov, E.V, Gertler, F.B, Almo, S.C.
Deposit date:1999-05-17
Release date:1999-05-25
Last modified:2018-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of EVH1, a novel proline-rich ligand-binding module involved in cytoskeletal dynamics and neural function
Nat.Struct.Biol., 6, 1999
1DFC
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BU of 1dfc by Molmil
CRYSTAL STRUCTURE OF HUMAN FASCIN, AN ACTIN-CROSSLINKING PROTEIN
Descriptor: FASCIN
Authors:Fedorov, A.A, Fedorov, E.V, Ono, S, Matsumura, F, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:1999-11-18
Release date:2000-11-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure, evolutionary conservation, and conformational dynamics of Homo sapiens fascin-1, an F-actin crosslinking protein.
J.Mol.Biol., 400, 2010
1RNQ
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BU of 1rnq by Molmil
RIBONUCLEASE A CRYSTALLIZED FROM 8M SODIUM FORMATE
Descriptor: FORMIC ACID, RIBONUCLEASE A
Authors:Fedorov, A.A, Josef-Mccarthy, D, Graf, I, Anguelova, D, Fedorov, E.V, Almo, S.C.
Deposit date:1995-11-08
Release date:1996-04-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ionic interactions in crystalline bovine pancreatic ribonuclease A.
Biochemistry, 35, 1996
1RNZ
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BU of 1rnz by Molmil
RIBONUCLEASE A CRYSTALLIZED FROM 2.5M SODIUM CHLORIDE, 3.3M SODIUM FORMATE
Descriptor: CHLORIDE ION, RIBONUCLEASE A
Authors:Fedorov, A.A, Josph-Mccarthy, D, Fedorov, E.V, Sirakova, D, Graf, I, Almo, S.C.
Deposit date:1996-11-08
Release date:1997-04-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ionic interactions in crystalline bovine pancreatic ribonuclease A.
Biochemistry, 35, 1996

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