6F4W
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![BU of 6f4w by Molmil](/molmil-images/mine/6f4w) | Crystal structure of H. pylori purine nucleoside phosphorylase in complex with formycin A | Descriptor: | (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, Purine nucleoside phosphorylase DeoD-type | Authors: | Stefanic, Z. | Deposit date: | 2017-11-30 | Release date: | 2018-02-14 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.293 Å) | Cite: | Helicobacter pylori purine nucleoside phosphorylase shows new distribution patterns of open and closed active site conformations and unusual biochemical features. FEBS J., 285, 2018
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6F5I
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![BU of 6f5i by Molmil](/molmil-images/mine/6f5i) | Crystal structure of H. pylori purine nucleoside phosphorylase | Descriptor: | METHANOL, Purine nucleoside phosphorylase DeoD-type | Authors: | Stefanic, Z. | Deposit date: | 2017-12-01 | Release date: | 2018-02-14 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.298 Å) | Cite: | Helicobacter pylori purine nucleoside phosphorylase shows new distribution patterns of open and closed active site conformations and unusual biochemical features. FEBS J., 285, 2018
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5MX4
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![BU of 5mx4 by Molmil](/molmil-images/mine/5mx4) | |
5MX8
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![BU of 5mx8 by Molmil](/molmil-images/mine/5mx8) | |
6F5A
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![BU of 6f5a by Molmil](/molmil-images/mine/6f5a) | Crystal structure of H. pylori purine nucleoside phosphorylase | Descriptor: | Purine nucleoside phosphorylase DeoD-type | Authors: | Stefanic, Z. | Deposit date: | 2017-12-01 | Release date: | 2018-02-14 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.201 Å) | Cite: | Helicobacter pylori purine nucleoside phosphorylase shows new distribution patterns of open and closed active site conformations and unusual biochemical features. FEBS J., 285, 2018
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5USG
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![BU of 5usg by Molmil](/molmil-images/mine/5usg) | 5-Se-T2/4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant | Descriptor: | DNA (5'-D(*AP*(T5S)P*GP*(T5S)P*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ... | Authors: | Fang, Z, Qin, L, Huang, Z. | Deposit date: | 2017-02-13 | Release date: | 2017-03-08 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate Chemistryselect, 8, 2023
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6F4X
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5USA
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![BU of 5usa by Molmil](/molmil-images/mine/5usa) | 5-Se-T2-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant | Descriptor: | DNA (5'-D(*AP*(T5S)P*GP*TP*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ... | Authors: | Fang, Z, Qin, L, Huang, Z. | Deposit date: | 2017-02-13 | Release date: | 2017-03-08 | Last modified: | 2024-05-22 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate Chemistryselect, 8, 2023
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5USE
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![BU of 5use by Molmil](/molmil-images/mine/5use) | 5-Se-T4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant | Descriptor: | DNA (5'-D(*AP*TP*GP*(T5S)P*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ... | Authors: | Fang, Z, Qin, L, Huang, Z. | Deposit date: | 2017-02-13 | Release date: | 2017-03-08 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (1.73 Å) | Cite: | Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate Chemistryselect, 8, 2023
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5US2
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6G7X
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6PTS
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![BU of 6pts by Molmil](/molmil-images/mine/6pts) | NMR data-driven model of KRas-GMPPNP:RBD-CRD complex tethered to a nanodisc (state A) | Descriptor: | 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ... | Authors: | Fang, Z, Lee, K, Gasmi-Seabrook, G, Ikura, M, Marshall, C.B. | Deposit date: | 2019-07-16 | Release date: | 2020-05-13 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Multivalent assembly of KRAS with the RAS-binding and cysteine-rich domains of CRAF on the membrane. Proc.Natl.Acad.Sci.USA, 117, 2020
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6PTW
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![BU of 6ptw by Molmil](/molmil-images/mine/6ptw) | NMR data-driven model of KRas-GMPPNP:RBD-CRD complex tethered to a nanodisc (state B) | Descriptor: | 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ... | Authors: | Fang, Z, Lee, K, Gasmi-Seabrook, G, Ikura, M, Marshall, C.B. | Deposit date: | 2019-07-16 | Release date: | 2020-05-13 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Multivalent assembly of KRAS with the RAS-binding and cysteine-rich domains of CRAF on the membrane. Proc.Natl.Acad.Sci.USA, 117, 2020
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5W7O
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![BU of 5w7o by Molmil](/molmil-images/mine/5w7o) | |
5WJR
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![BU of 5wjr by Molmil](/molmil-images/mine/5wjr) | |
7U8B
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![BU of 7u8b by Molmil](/molmil-images/mine/7u8b) | Product of 14mer primer with activated asymmetric GA dimer diastereomer 1 | Descriptor: | 5'-O-[(S)-(2-amino-1H-imidazol-1-yl)(hydroxy)phosphoryl]adenosine, RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*(G46))-3'), SULFATE ION | Authors: | Fang, Z, Szostak, J.W. | Deposit date: | 2022-03-08 | Release date: | 2023-03-15 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.73 Å) | Cite: | Understanding the metal ion function in the RNA non-enzymatic extesion with phosphorothioates To Be Published
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7U87
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![BU of 7u87 by Molmil](/molmil-images/mine/7u87) | Product of 13mer primer with activated G monomer diastereomer 1 | Descriptor: | 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(sulfanyl)phosphoryl]guanosine, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*(G46)P*(G46))-3') | Authors: | Fang, Z, Szostak, J.W. | Deposit date: | 2022-03-08 | Release date: | 2023-03-15 | Last modified: | 2024-04-17 | Method: | X-RAY DIFFRACTION (1.701 Å) | Cite: | Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension. J.Am.Chem.Soc., 2024
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7U88
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![BU of 7u88 by Molmil](/molmil-images/mine/7u88) | Product of 13mer primer with activated G monomer diastereomer 2 | Descriptor: | 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(sulfanyl)phosphoryl]guanosine, RNA (5'-R(*(LKC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*(G46)P*(G46))-3'), SULFATE ION | Authors: | Fang, Z, Szostak, J.W. | Deposit date: | 2022-03-08 | Release date: | 2023-03-15 | Last modified: | 2024-04-17 | Method: | X-RAY DIFFRACTION (2.14 Å) | Cite: | Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension. J.Am.Chem.Soc., 2024
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7U89
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![BU of 7u89 by Molmil](/molmil-images/mine/7u89) | Product of 14mer primer with activated G monomer diastereomer 1 | Descriptor: | 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(sulfanyl)phosphoryl]guanosine, RNA (5'-R(*(LKC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*(G46))-3') | Authors: | Fang, Z, Szostak, J.W. | Deposit date: | 2022-03-08 | Release date: | 2023-03-15 | Last modified: | 2024-04-17 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension. J.Am.Chem.Soc., 2024
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7U8A
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![BU of 7u8a by Molmil](/molmil-images/mine/7u8a) | Product of 14mer primer with activated G monomer diastereomer 2 | Descriptor: | 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(sulfanyl)phosphoryl]guanosine, MAGNESIUM ION, RNA (5'-R(*(LKC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*(G46))-3') | Authors: | Fang, Z, Szostak, J.W. | Deposit date: | 2022-03-08 | Release date: | 2023-03-15 | Last modified: | 2024-04-17 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension. J.Am.Chem.Soc., 2024
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8FEO
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![BU of 8feo by Molmil](/molmil-images/mine/8feo) | |
8FEQ
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![BU of 8feq by Molmil](/molmil-images/mine/8feq) | |
8FEP
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![BU of 8fep by Molmil](/molmil-images/mine/8fep) | |
8FER
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3UT6
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![BU of 3ut6 by Molmil](/molmil-images/mine/3ut6) | Crystal structure of E. Coli PNP complexed with PO4 and formycin A | Descriptor: | (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, PHOSPHATE ION, Purine nucleoside phosphorylase deoD-type | Authors: | Stefanic, Z. | Deposit date: | 2011-11-25 | Release date: | 2012-05-23 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.895 Å) | Cite: | New phosphate binding sites in the crystal structure of Escherichia coli purine nucleoside phosphorylase complexed with phosphate and formycin A. Febs Lett., 586, 2012
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