4UWA
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4UWE
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3M9S
| Crystal structure of respiratory complex I from Thermus thermophilus | Descriptor: | FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... | Authors: | Efremov, R.G, Baradaran, R, Sazanov, L.A. | Deposit date: | 2010-03-22 | Release date: | 2010-05-26 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (4.5 Å) | Cite: | The architecture of respiratory complex I Nature, 465, 2010
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3M9C
| Crystal structure of the membrane domain of respiratory complex I from Escherichia coli | Descriptor: | NADH-quinone oxidoreductase subunit NuoL, NADH-quinone oxidoreductase subunit NuoM, NADH-quinone oxidoreductase subunit NuoN, ... | Authors: | Efremov, R.G, Baradaran, R, Sazanov, L.A. | Deposit date: | 2010-03-22 | Release date: | 2010-05-26 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (3.9 Å) | Cite: | The architecture of respiratory complex I Nature, 465, 2010
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3POU
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3POX
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3POQ
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3RKO
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8OQY
| Structure of apo form of human gamma-secretase PSEN1 APH-1B isoform reconstituted into lipid nanodisc | Descriptor: | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Odorcic, I, Chavez Gutierrez, L, Efremov, R.G. | Deposit date: | 2023-04-12 | Release date: | 2024-04-24 | Last modified: | 2024-06-19 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Apo and A beta 46-bound gamma-secretase structures provide insights into amyloid-beta processing by the APH-1B isoform. Nat Commun, 15, 2024
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8OQZ
| Structure of human gamma-secretase PSEN1 APH-1B isoform reconstituted into lipid nanodisc in complex with Ab46 | Descriptor: | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Odorcic, I, Chavez Gutierrez, L, Efremov, R.G. | Deposit date: | 2023-04-12 | Release date: | 2024-04-24 | Last modified: | 2024-06-19 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Apo and A beta 46-bound gamma-secretase structures provide insights into amyloid-beta processing by the APH-1B isoform. Nat Commun, 15, 2024
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6FOO
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5NQ4
| Cytotoxin-1 in DPC-micelle | Descriptor: | Cytotoxin 1 | Authors: | Dubovskii, P.V, Dubinnyi, M.A, Volynsky, P.E, Pustovalova, Y.E, Konshina, A.G, Utkin, Y.N, Efremov, R.G, Arseniev, A.S. | Deposit date: | 2017-04-19 | Release date: | 2017-12-13 | Last modified: | 2019-05-08 | Method: | SOLUTION NMR | Cite: | Impact of membrane partitioning on the spatial structure of an S-type cobra cytotoxin. J. Biomol. Struct. Dyn., 36, 2018
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5T8A
| Recombinant cytotoxin-I from the venom of cobra N. oxiana | Descriptor: | Cytotoxin 1 | Authors: | Dubovskii, P.V, Dubinnyi, M.A, Shulepko, M.A, Lyukmanova, E.N, Dolgikh, D.A, Kirpichnikov, M.P, Efremov, R.G. | Deposit date: | 2016-09-07 | Release date: | 2017-09-20 | Last modified: | 2019-05-08 | Method: | SOLUTION NMR | Cite: | Structural and Dynamic "Portraits" of Recombinant and Native Cytotoxin I from Naja oxiana: How Close Are They? Biochemistry, 56, 2017
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2PCO
| Spatial Structure and Membrane Permeabilization for Latarcin-1, a Spider Antimicrobial Peptide | Descriptor: | Latarcin-1 | Authors: | Dubovskii, P.V, Volynsky, P.E, Polyansky, A.A, Chupin, V.V, Efremov, R.G, Arseniev, A.S. | Deposit date: | 2007-03-30 | Release date: | 2008-03-18 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Three-dimensional structure/hydrophobicity of latarcins specifies their mode of membrane activity. Biochemistry, 47, 2008
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7NYH
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7NZ1
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7NYR
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7NYU
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7NYV
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1ZAD
| Structure of cytotoxin I (CTI) from Naja Oxiana in complex with DPC micelle | Descriptor: | Cytotoxin 1 | Authors: | Dubinnyi, M.A, Pustovalova, Y.E, Dubovskii, P.V, Utkin, Y.N, Konshina, A.G, Efremov, R.G, Arseniev, A.S. | Deposit date: | 2005-04-06 | Release date: | 2006-06-20 | Last modified: | 2022-03-02 | Method: | SOLUTION NMR | Cite: | Interaction of three-finger toxins with phospholipid membranes: comparison of S- and P-type cytotoxins Biochem.J., 387, 2005
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7QD8
| Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in apo state | Descriptor: | Transposase for transposon Tn4430 | Authors: | Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G. | Deposit date: | 2021-11-26 | Release date: | 2022-10-26 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | Structural insight into Tn3 family transposition mechanism. Nat Commun, 13, 2022
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7QD4
| Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with 100 bp long transposon end DNA | Descriptor: | IR100 DNA substrate, none transferred strand, transferred strand, ... | Authors: | Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G. | Deposit date: | 2021-11-26 | Release date: | 2022-10-26 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | Structural insight into Tn3 family transposition mechanism. Nat Commun, 13, 2022
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7QD6
| Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with strand-transfer like DNA product | Descriptor: | IR71st non transferred strand, IR71st transferred strand, Transposase for transposon Tn4430 | Authors: | Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G. | Deposit date: | 2021-11-26 | Release date: | 2022-10-26 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3 Å) | Cite: | Structural insight into Tn3 family transposition mechanism. Nat Commun, 13, 2022
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7QD5
| Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with 48 bp long transposon end DNA | Descriptor: | IR48 DNA substrate, non transferred strand, IR48 transferred strand, ... | Authors: | Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G. | Deposit date: | 2021-11-26 | Release date: | 2022-10-26 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | Structural insight into Tn3 family transposition mechanism. Nat Commun, 13, 2022
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5LUE
| Minor form of the recombinant cytotoxin-1 from N. oxiana | Descriptor: | VC-1=CYTOTOXIN | Authors: | Dubovskii, P.V, Dubinnyi, M.A, Shulepko, M.A, Lyukmanova, E.N, Dolgikh, D.A, Kirpichnikov, M.P, Efremov, R.G. | Deposit date: | 2016-09-08 | Release date: | 2017-09-20 | Last modified: | 2019-05-08 | Method: | SOLUTION NMR | Cite: | Structural and Dynamic "Portraits" of Recombinant and Native Cytotoxin I from Naja oxiana: How Close Are They? Biochemistry, 56, 2017
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