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PDB: 68 件

4UWA
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Structure of the ryanodine receptor at resolution of 6.1 A in closed state
分子名称: RYANODINE RECEPTOR 1
著者Efremov, R.G, Leitner, A, Aebersold, R, Raunser, S.
登録日2014-08-11
公開日2014-12-10
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Architecture and Conformational Switch Mechanism of the Ryanodine Receptor.
Nature, 517, 2015
4UWE
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BU of 4uwe by Molmil
Structure of the ryanodine receptor at resolution of 8.5 A in partially open state
分子名称: RYANODINE RECEPTOR 1
著者Efremov, R.G, Leitner, A, Aebersold, R, Raunser, S.
登録日2014-08-11
公開日2014-12-10
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (8.5 Å)
主引用文献Architecture and Conformational Switch Mechanism of the Ryanodine Receptor.
Nature, 517, 2015
3M9S
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BU of 3m9s by Molmil
Crystal structure of respiratory complex I from Thermus thermophilus
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
著者Efremov, R.G, Baradaran, R, Sazanov, L.A.
登録日2010-03-22
公開日2010-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献The architecture of respiratory complex I
Nature, 465, 2010
3M9C
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Crystal structure of the membrane domain of respiratory complex I from Escherichia coli
分子名称: NADH-quinone oxidoreductase subunit NuoL, NADH-quinone oxidoreductase subunit NuoM, NADH-quinone oxidoreductase subunit NuoN, ...
著者Efremov, R.G, Baradaran, R, Sazanov, L.A.
登録日2010-03-22
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献The architecture of respiratory complex I
Nature, 465, 2010
3POU
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Crystal structure of E.coli OmpF porin in lipidic cubic phase: space group H32, large unit cell
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, OmpF protein
著者Efremov, R.G, Sazanov, L.A.
登録日2010-11-23
公開日2012-03-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of Escherichia coli OmpF porin from lipidic mesophase.
J.Struct.Biol., 178, 2012
3POX
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Crystal Structure of E.coli OmpF porin in lipidic cubic phase: space group P1
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, OmpF protein, POTASSIUM ION, ...
著者Efremov, R.G, Sazanov, L.A.
登録日2010-11-23
公開日2012-03-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Escherichia coli OmpF porin from lipidic mesophase.
J.Struct.Biol., 178, 2012
3POQ
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Crystal structure of E.coli OmpF porin in lipidic cubic phase: space group H32, small unit cell
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, OmpF protein, THIOCYANATE ION
著者Efremov, R.G, Sazanov, L.A.
登録日2010-11-23
公開日2012-03-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of Escherichia coli OmpF porin from lipidic mesophase.
J.Struct.Biol., 178, 2012
3RKO
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BU of 3rko by Molmil
Crystal structure of the membrane domain of respiratory complex I from E. coli at 3.0 angstrom resolution
分子名称: 7-cyclohexylheptyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, EICOSANE, NADH-QUINONE OXIDOREDUCTASE SUBUNIT A, ...
著者Efremov, R.G, Sazanov, L.A.
登録日2011-04-18
公開日2011-08-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of the membrane domain of respiratory complex I.
Nature, 476, 2011
7NZ1
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Respiratory complex I from Escherichia coli - focused refinement of cytoplasmic arm
分子名称: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Kolata, P, Efremov, R.G.
登録日2021-03-23
公開日2021-08-18
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation.
Elife, 10, 2021
7NYR
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Respiratory complex I from Escherichia coli - conformation 1
分子名称: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Kolata, P, Efremov, R.G.
登録日2021-03-23
公開日2021-08-25
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation.
Elife, 10, 2021
7NYU
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Respiratory complex I from Escherichia coli - conformation 2
分子名称: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Kolata, P, Efremov, R.G.
登録日2021-03-23
公開日2021-08-25
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation.
Elife, 10, 2021
7NYV
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Respiratory complex I from Escherichia coli - conformation 3
分子名称: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Kolata, P, Efremov, R.G.
登録日2021-03-23
公開日2021-08-25
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation.
Elife, 10, 2021
8OQY
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BU of 8oqy by Molmil
Structure of apo form of human gamma-secretase PSEN1 APH-1B isoform reconstituted into lipid nanodisc
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Odorcic, I, Chavez Gutierrez, L, Efremov, R.G.
登録日2023-04-12
公開日2024-04-24
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Apo and A beta 46-bound gamma-secretase structures provide insights into amyloid-beta processing by the APH-1B isoform.
Nat Commun, 15, 2024
8OQZ
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BU of 8oqz by Molmil
Structure of human gamma-secretase PSEN1 APH-1B isoform reconstituted into lipid nanodisc in complex with Ab46
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Odorcic, I, Chavez Gutierrez, L, Efremov, R.G.
登録日2023-04-12
公開日2024-04-24
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Apo and A beta 46-bound gamma-secretase structures provide insights into amyloid-beta processing by the APH-1B isoform.
Nat Commun, 15, 2024
7NYH
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BU of 7nyh by Molmil
Respiratory complex I from Escherichia coli - focused refinement of membrane arm
分子名称: NADH-quinone oxidoreductase subunit A, NADH-quinone oxidoreductase subunit H, NADH-quinone oxidoreductase subunit J, ...
著者Kolata, P, Efremov, R.G.
登録日2021-03-22
公開日2021-08-18
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation.
Elife, 10, 2021
2PCO
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BU of 2pco by Molmil
Spatial Structure and Membrane Permeabilization for Latarcin-1, a Spider Antimicrobial Peptide
分子名称: Latarcin-1
著者Dubovskii, P.V, Volynsky, P.E, Polyansky, A.A, Chupin, V.V, Efremov, R.G, Arseniev, A.S.
登録日2007-03-30
公開日2008-03-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Three-dimensional structure/hydrophobicity of latarcins specifies their mode of membrane activity.
Biochemistry, 47, 2008
5T8A
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BU of 5t8a by Molmil
Recombinant cytotoxin-I from the venom of cobra N. oxiana
分子名称: Cytotoxin 1
著者Dubovskii, P.V, Dubinnyi, M.A, Shulepko, M.A, Lyukmanova, E.N, Dolgikh, D.A, Kirpichnikov, M.P, Efremov, R.G.
登録日2016-09-07
公開日2017-09-20
最終更新日2019-05-08
実験手法SOLUTION NMR
主引用文献Structural and Dynamic "Portraits" of Recombinant and Native Cytotoxin I from Naja oxiana: How Close Are They?
Biochemistry, 56, 2017
6FOO
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BU of 6foo by Molmil
Structure of Ryanodine Receptor 1 in nanodiscs in the presence of calcium and ATP
分子名称: Ryanodine receptor 1, ZINC ION
著者Willegems, K, Efremov, R.G.
登録日2018-02-08
公開日2018-08-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献Influence of Lipid Mimetics on Gating of Ryanodine Receptor.
Structure, 26, 2018
2F93
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K Intermediate Structure of Sensory Rhodopsin II/Transducer Complex in Combination with the Ground State Structure
分子名称: RETINAL, Sensory rhodopsin II, Sensory rhodopsin II transducer, ...
著者Moukhametzianov, R.I, Klare, J.P, Efremov, R.G, Baecken, C, Goeppner, A, Labahn, J, Engelhard, M, Bueldt, G, Gordeliy, V.I.
登録日2005-12-05
公開日2006-03-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Development of the signal in sensory rhodopsin and its transfer to the cognate transducer.
Nature, 440, 2006
2F95
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M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure
分子名称: RETINAL, Sensory rhodopsin II, Sensory rhodopsin II transducer, ...
著者Moukhametzianov, R.I, Klare, J.P, Efremov, R.G, Baecken, C, Goeppner, A, Labahn, J, Engelhard, M, Bueldt, G, Gordeliy, V.I.
登録日2005-12-05
公開日2006-03-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Development of the signal in sensory rhodopsin and its transfer to the cognate transducer.
Nature, 440, 2006
1H2S
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Molecular basis of transmenbrane signalling by sensory rhodopsin II-transducer complex
分子名称: RETINAL, SENSORY RHODOPSIN II, SENSORY RHODOPSIN II TRANSDUCER, ...
著者Gordeliy, V.I, Labahn, J, Moukhametzianov, R, Efremov, R, Granzin, J, Schlesinger, R, Bueldt, G, Savopol, T, Scheidig, A, Klare, J.P, Engelhard, M.
登録日2002-08-15
公開日2002-10-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Molecular Basis of Transmembrane Signalling by Sensory Rhodopsin II-Transducer Complex
Nature, 419, 2002
1ZAD
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Structure of cytotoxin I (CTI) from Naja Oxiana in complex with DPC micelle
分子名称: Cytotoxin 1
著者Dubinnyi, M.A, Pustovalova, Y.E, Dubovskii, P.V, Utkin, Y.N, Konshina, A.G, Efremov, R.G, Arseniev, A.S.
登録日2005-04-06
公開日2006-06-20
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Interaction of three-finger toxins with phospholipid membranes: comparison of S- and P-type cytotoxins
Biochem.J., 387, 2005
5LUE
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BU of 5lue by Molmil
Minor form of the recombinant cytotoxin-1 from N. oxiana
分子名称: VC-1=CYTOTOXIN
著者Dubovskii, P.V, Dubinnyi, M.A, Shulepko, M.A, Lyukmanova, E.N, Dolgikh, D.A, Kirpichnikov, M.P, Efremov, R.G.
登録日2016-09-08
公開日2017-09-20
最終更新日2019-05-08
実験手法SOLUTION NMR
主引用文献Structural and Dynamic "Portraits" of Recombinant and Native Cytotoxin I from Naja oxiana: How Close Are They?
Biochemistry, 56, 2017
4O9Y
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Crystal Structure of TcdA1
分子名称: TcdA1
著者Meusch, D, Gatsogiannis, C, Efremov, R.G, Lang, A.E, Hofnagel, O, Vetter, I.R, Aktories, K, Raunser, S.
登録日2014-01-03
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.502 Å)
主引用文献Mechanism of Tc toxin action revealed in molecular detail.
Nature, 508, 2014
1DXZ
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M2 TRANSMEMBRANE SEGMENT OF ALPHA-SUBUNIT OF NICOTINIC ACETYLCHOLINE RECEPTOR FROM TORPEDO CALIFORNICA, NMR, 20 STRUCTURES
分子名称: ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN
著者Pashkov, V.S, Maslennikov, I.V, Tchikin, L.D, Efremov, R.G, Ivanov, V.T, Arseniev, A.S.
登録日2000-01-20
公開日2000-02-02
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Spatial Structure of the M2 Transmembrane Segment of the Nicotinic Acetylcholine Receptor Alpha-Subunit
FEBS Lett., 457, 1999

 

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