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PDB: 427 results

7LZ3
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BU of 7lz3 by Molmil
Computational design of constitutively active cGAS
Descriptor: Cyclic GMP-AMP synthase, GLYCEROL, ZINC ION
Authors:Dowling, Q, Volkman, H.E, Gray, E.E, Ovchinnikov, S, Cambier, S, Bera, A.K, Bick, M, Kang, A, Stetson, D.B, King, N.P.
Deposit date:2021-03-08
Release date:2022-03-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Computational design of constitutively active cGAS.
Nat.Struct.Mol.Biol., 30, 2023
5AC9
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BU of 5ac9 by Molmil
Structure-based energetics of protein interfaces guide Foot-and-Mouth disease virus vaccine design
Descriptor: VP1, VP2, VP3, ...
Authors:Kotecha, A, Seago, J, Scott, K, Burman, A, Loureiro, S, Ren, J, Porta, C, Ginn, H.M, Jackson, T, PerezMartin, E, Siebert, C.A, Paul, G, Huiskonen, J.T, Jones, I.M, Esnouf, R.M, Fry, E.E, Maree, F.F, Charleston, B, Stuart, D.I.
Deposit date:2015-08-14
Release date:2015-09-23
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure-Based Energetics of Protein Interfaces Guide Foot-and-Mouth Disease Vaccine Design
Nat.Struct.Mol.Biol., 22, 2015
7LYX
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BU of 7lyx by Molmil
Crystal structure of human CYP8B1 in complex with (S)-tioconazole
Descriptor: (S)-Tioconazole, 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase, GLYCEROL, ...
Authors:Liu, J, Scott, E.E.
Deposit date:2021-03-08
Release date:2022-08-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure and characterization of human cytochrome P450 8B1 supports future drug design for nonalcoholic fatty liver disease and diabetes.
J.Biol.Chem., 298, 2022
2ANE
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BU of 2ane by Molmil
Crystal structure of N-terminal domain of E.Coli Lon Protease
Descriptor: ATP-dependent protease La
Authors:Li, M, Rasulova, F, Melnikov, E.E, Rotanova, T.V, Gustchina, A, Maurizi, M.R, Wlodawer, A.
Deposit date:2005-08-11
Release date:2005-11-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of the N-terminal domain of E. coli Lon protease.
Protein Sci., 14, 2005
7M8V
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BU of 7m8v by Molmil
Human CYP11B2 in complex with LCI699
Descriptor: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile, Cytochrome P450 11B2, mitochondrial, ...
Authors:Scott, E.E, Brixius-Anderko, S.
Deposit date:2021-03-30
Release date:2021-06-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Aldosterone Synthase Structure With Cushing Disease Drug LCI699 Highlights Avenues for Selective CYP11B Drug Design.
Hypertension, 78, 2021
5AG2
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BU of 5ag2 by Molmil
SOD-3 azide complex
Descriptor: ACETATE ION, AZIDE ION, MALONATE ION, ...
Authors:Hunter, G.J, Trinh, C.H, Bonetta, R, Stewart, E.E, Cabelli, D.E, Hunter, T.
Deposit date:2015-01-27
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:The Structure of the Caenorhabditis Elegans Manganese Superoxide Dismutase Mnsod-3-Azide Complex.
Protein Sci., 24, 2015
4Z3U
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BU of 4z3u by Molmil
PRV nuclear egress complex
Descriptor: CHLORIDE ION, SODIUM ION, UL31, ...
Authors:Bigalke, J.M, Heldwein, E.E.
Deposit date:2015-03-31
Release date:2015-11-11
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (2.706 Å)
Cite:Structural basis of membrane budding by the nuclear egress complex of herpesviruses.
Embo J., 34, 2015
7M8I
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Human CYP11B2 and human adrenodoxin in complex with fadrozole
Descriptor: 4-[(5R)-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-5-yl]benzonitrile, Adrenodoxin, Cytochrome P450 11B2, ...
Authors:Scott, E.E, Brixius-Anderko, S.
Deposit date:2021-03-29
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structural and functional insights into aldosterone synthase interaction with its redox partner protein adrenodoxin.
J.Biol.Chem., 296, 2021
1ZJF
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BU of 1zjf by Molmil
12mer-spd-P4N
Descriptor: 5'-D(*AP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*T)-3', 5'-D(*TP*AP*GP*CP*CP*CP*CP*GP*CP*CP*CP*C)-3'
Authors:Dohm, J.A, Hsu, M.H, Hwu, J.R, Huang, R.C, Moudrianakis, E.N, Lattman, E.E, Gittis, A.G.
Deposit date:2005-04-28
Release date:2005-05-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Influence of Ions, Hydration, and the Transcriptional Inhibitor P4N on the Conformations of the Sp1 Binding Site.
J.Mol.Biol., 349, 2005
1ZBA
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BU of 1zba by Molmil
Foot-and-Mouth Disease virus serotype A1061 complexed with oligosaccharide receptor.
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Coat protein VP1, Coat protein VP2, ...
Authors:Fry, E.E, Newman, J.W, Curry, S, Najjam, S, Jackson, T, Blakemore, W, Lea, S.M, Miller, L, Burman, A, King, A.M, Stuart, D.I.
Deposit date:2005-04-08
Release date:2005-06-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Foot-and-mouth disease virus serotype A1061 alone and complexed with oligosaccharide receptor: receptor conservation in the face of antigenic variation.
J.Gen.Virol., 86, 2005
1ZBE
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BU of 1zbe by Molmil
Foot-and Mouth Disease Virus Serotype A1061
Descriptor: Coat protein VP1, Coat protein VP2, Coat protein VP3, ...
Authors:Fry, E.E, Newman, J.W, Curry, S, Najjam, S, Jackson, T, Blakemore, W, Lea, S.M, Miller, L, Burman, A, King, A.M, Stuart, D.I.
Deposit date:2005-04-08
Release date:2005-06-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Foot-and-mouth disease virus serotype A1061 alone and complexed with oligosaccharide receptor: receptor conservation in the face of antigenic variation.
J.Gen.Virol., 86, 2005
1ZPR
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BU of 1zpr by Molmil
E. COLI THYMIDYLATE SYNTHASE MUTANT E58Q IN COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)
Descriptor: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE
Authors:Sage, C.R, Stout, T.J, Rutenber, E.E, Stroud, R.M.
Deposit date:1996-10-15
Release date:1997-07-07
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An essential role for water in an enzyme reaction mechanism: the crystal structure of the thymidylate synthase mutant E58Q.
Biochemistry, 35, 1996
5AGS
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BU of 5ags by Molmil
Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct 3-(Aminomethyl)-4-bromo-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP
Descriptor: 3-(AMINOMETHYL)-4-BROMO-7-ETHOXYBENZO[C][1,2]OXABOROL-1(3H)-OL-MODIFIED ADENOSINE, LEUCYL-TRNA SYNTHETASE, METHIONINE
Authors:Palencia, A, Li, X, Alley, M.R.K, Ding, C, Easom, E.E, Hernandez, V, Meewan, M, Mohan, M, Rock, F.L, Franzblau, S.G, Wang, Y, Lenaerts, A.J, Parish, T, Cooper, C.B, Waters, M.G, Ma, Z, Mendoza, A, Barros, D, Cusack, S, Plattner, J.J.
Deposit date:2015-02-03
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
5ACA
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BU of 5aca by Molmil
Structure-based energetics of protein interfaces guide Foot-and-Mouth disease virus vaccine design
Descriptor: VP1, VP2, VP3, ...
Authors:Kotecha, A, Seago, J, Scott, K, Burman, A, Loureiro, S, Ren, J, Porta, C, Ginn, H.M, Jackson, T, Perez-Martin, E, Siebert, C.A, Paul, G, Huiskonen, J.T, Jones, I.M, Esnouf, R.M, Fry, E.E, Maree, F.F, Charleston, B, Stuart, D.I.
Deposit date:2015-08-14
Release date:2015-09-23
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure-Based Energetics of Protein Interfaces Guide Foot-and-Mouth Disease Vaccine Design
Nat.Struct.Mol.Biol., 22, 2015
4ZXS
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BU of 4zxs by Molmil
HSV-1 nuclear egress complex
Descriptor: CHLORIDE ION, NICKEL (II) ION, SODIUM ION, ...
Authors:Bigalke, J.M, Heldwein, E.E.
Deposit date:2015-05-20
Release date:2015-11-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.772 Å)
Cite:Structural basis of membrane budding by the nuclear egress complex of herpesviruses.
Embo J., 34, 2015
2AID
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BU of 2aid by Molmil
STRUCTURE OF A NON-PEPTIDE INHIBITOR COMPLEXED WITH HIV-1 PROTEASE: DEVELOPING A CYCLE OF STRUCTURE-BASED DRUG DESIGN
Descriptor: 4-(4-CHLORO-PHENYL)-1-{3-[2-(4-FLUORO-PHENYL)-[1,3]DITHIOLAN-2-YL]-PROPYL}-PIPERIDIN-4-OL, CHLORIDE ION, HUMAN IMMUNODEFICIENCY VIRUS PROTEASE
Authors:Rutenber, E.E, Fauman, E.B, Keenan, R.J, Stroud, R.M.
Deposit date:1997-04-17
Release date:1997-10-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a non-peptide inhibitor complexed with HIV-1 protease. Developing a cycle of structure-based drug design.
J.Biol.Chem., 268, 1993
5B6N
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BU of 5b6n by Molmil
Crystal structures of human peroxiredoxin 6 in sulfinic acid state
Descriptor: Peroxiredoxin-6
Authors:Kim, K.H, Lee, W.T, Kim, E.E.
Deposit date:2016-05-30
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.895 Å)
Cite:Crystal structures of human peroxiredoxin 6 in different oxidation states
Biochem.Biophys.Res.Commun., 477, 2016
5B6M
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BU of 5b6m by Molmil
Crystal structure of human peroxiredoxin 6 in reduced state
Descriptor: Peroxiredoxin-6
Authors:Kim, K.H, Lee, W.T, Kim, E.E.
Deposit date:2016-05-30
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:Crystal structures of human peroxiredoxin 6 in different oxidation states
Biochem.Biophys.Res.Commun., 477, 2016
7N9U
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BU of 7n9u by Molmil
CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions
Descriptor: Capsid protein, Nanobody
Authors:Gerber, E.E, Digianantonio, K.M, Tripler, T.N, Smaga, S.S, Summers, B.J, Xiong, Y.
Deposit date:2021-06-18
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions
To Be Published
7N9X
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BU of 7n9x by Molmil
CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions
Descriptor: Capsid protein, Nanobody, Peptidyl-prolyl cis-trans isomerase A
Authors:Gerber, E.E, Digianantonio, K.M, Tripler, T.N, Smaga, S.S, Summers, B.J, Xiong, Y.
Deposit date:2021-06-18
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.511 Å)
Cite:CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions
To Be Published
7LKQ
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BU of 7lkq by Molmil
The PilZ(delta107-117)-FimX(GGDEF-EAL) complex from Xanthomonas citri
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FimX(GGDEF-EAL), MAGNESIUM ION, ...
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LKO
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BU of 7lko by Molmil
The PilB(N-terminal)-PilZ complex of the Type IV pilus from Xanthomonas citri (2.9 A)
Descriptor: Pilus biogenesis protein, SULFATE ION, Type IV fimbriae assembly protein
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LKN
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BU of 7lkn by Molmil
The PilB(N-terminal_P70S mutant)-PilZ complex (SeMet)
Descriptor: Pilus biogenesis protein, SULFATE ION, Type IV fimbriae assembly protein
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2021-09-01
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LKM
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BU of 7lkm by Molmil
The PilB(N-terminal_P70S mutant)-PilZ complex of the Type IV pilus from Xanthomonas citri
Descriptor: Pilus biogenesis protein, SULFATE ION, Type IV fimbriae assembly protein
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LU8
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BU of 7lu8 by Molmil
Structure of the cryptic HMA domain of the human copper transporter ATP7A
Descriptor: Copper-transporting ATPase 1
Authors:Lee, W, Uhlemann, E.E, Tonelli, M, Dmitriev, O.Y.
Deposit date:2021-02-21
Release date:2021-09-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:At sixes and sevens: cryptic domain in the metal binding chain of the human copper transporter ATP7A.
Biophys.J., 120, 2021

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