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PDB: 428 results

6T4C
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BU of 6t4c by Molmil
Bovine enterovirus F3 in complex with glutathione
Descriptor: GLUTATHIONE, GLYCEROL, POTASSIUM ION, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Walter, T.S, Fry, E.E, Stuart, D.I.
Deposit date:2019-10-13
Release date:2020-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Glutathione facilitates enterovirus assembly by binding at a druggable pocket.
Commun Biol, 3, 2020
6GO1
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BU of 6go1 by Molmil
Crystal Structure of a Bacillus anthracis peptidoglycan deacetylase
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Polysaccharide deacetylase-like protein, ...
Authors:Giastas, P, Andreou, A, Eliopoulos, E.E.
Deposit date:2018-06-01
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:The putative polysaccharide deacetylase Ba0331: cloning, expression, crystallization and structure determination.
Acta Crystallogr.,Sect.F, 75, 2019
6T40
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BU of 6t40 by Molmil
Bovine enterovirus F3 in complex with a Cysteinylglycine dipeptide
Descriptor: CHLORIDE ION, CYSTEINE, GLYCEROL, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Walter, T.S, Fry, E.E, Stuart, D.I.
Deposit date:2019-10-11
Release date:2020-08-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Glutathione facilitates enterovirus assembly by binding at a druggable pocket.
Commun Biol, 3, 2020
6TI7
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BU of 6ti7 by Molmil
Mixing Abeta(1-40) and Abeta(1-42) peptides generates unique amyloid fibrils
Descriptor: Amyloid-beta precursor protein
Authors:Cerofolini, L, Ravera, E, Bologna, S, Wiglenda, T, Boddrich, A, Purfurst, B, Benilova, A, Korsak, M, Gallo, G, Rizzo, D, Gonnelli, L, Fragai, M, De Strooper, B, Wanker, E.E, Luchinat, C.
Deposit date:2019-11-21
Release date:2020-07-22
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:Mixing A beta (1-40) and A beta (1-42) peptides generates unique amyloid fibrils.
Chem.Commun.(Camb.), 56, 2020
6AVB
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BU of 6avb by Molmil
CryoEM structure of Mical Oxidized Actin (Class 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle
Authors:Grintsevich, E.E, Ge, P, Sawaya, M.R, Yesilyurt, H.G, Terman, J.R, Zhou, Z.H, Reisler, E.
Deposit date:2017-09-01
Release date:2018-01-17
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Catastrophic disassembly of actin filaments via Mical-mediated oxidation.
Nat Commun, 8, 2017
6T48
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BU of 6t48 by Molmil
Bovine enterovirus F3 in complex with glutathione and a Cysteinylglycine dipeptide
Descriptor: CHLORIDE ION, CYSTEINE, GLUTATHIONE, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Walter, T.S, Fry, E.E, Stuart, D.I.
Deposit date:2019-10-12
Release date:2020-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Glutathione facilitates enterovirus assembly by binding at a druggable pocket.
Commun Biol, 3, 2020
6AV9
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BU of 6av9 by Molmil
CryoEM structure of Mical Oxidized Actin (Class 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle
Authors:Grintsevich, E.E, Ge, P, Sawaya, M.R, Yesilyurt, H.G, Terman, J.R, Zhou, Z.H, Reisler, E.
Deposit date:2017-09-01
Release date:2018-01-17
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Catastrophic disassembly of actin filaments via Mical-mediated oxidation.
Nat Commun, 8, 2017
5Y7K
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BU of 5y7k by Molmil
Crystal structure of human DPP4 in complex with inhibitor1
Descriptor: (R)-4-((R)-3-amino-4-(2,4,5-trifluorophenyl)butanoyl)-3-(tert-butoxymethyl)piperazine-2-one, Dipeptidyl peptidase 4
Authors:Lee, H.K, Kim, E.E.
Deposit date:2017-08-17
Release date:2019-03-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.512 Å)
Cite:Unique binding mode of Evogliptin with human dipeptidyl peptidase IV.
Biochem.Biophys.Res.Commun., 494, 2017
4EJH
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BU of 4ejh by Molmil
Human Cytochrome P450 2A13 in complex with 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK)
Descriptor: 4-[methyl(nitroso)amino]-1-(pyridin-3-yl)butan-1-one, Cytochrome P450 2A13, GLYCEROL, ...
Authors:DeVore, N.M, Scott, E.E.
Deposit date:2012-04-06
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Nicotine and 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone binding and access channel in human cytochrome P450 2A6 and 2A13 enzymes.
J.Biol.Chem., 287, 2012
5H22
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BU of 5h22 by Molmil
Hsp90 alpha N-terminal domain in complex with an inhibitor
Descriptor: 4-chloranyl-7-[(4-methoxy-3,5-dimethyl-pyridin-2-yl)methyl]-5-(phenylmethyl)pyrrolo[2,3-d]pyrimidin-2-amine, Hsp90aa1 protein
Authors:Kim, E.E, Shin, S.C, Keum, G.C.
Deposit date:2016-10-13
Release date:2017-10-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Synthesis and in vitro antiproliferative activity of C5-benzyl substituted 2-amino-pyrrolo[2,3-d]pyrimidines as potent Hsp90 inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
5GKA
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BU of 5gka by Molmil
cryo-EM structure of human Aichi virus
Descriptor: Genome polyprotein, capsid protein VP0, capsid protein VP1
Authors:Zhu, L, Wang, X.X, Ren, J.S, Tuthill, T.J, Fry, E.E, Rao, Z.H, Stuart, D.I.
Deposit date:2016-07-04
Release date:2016-09-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of human Aichi virus and implications for receptor binding
Nat Microbiol, 1, 2016
5GVJ
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BU of 5gvj by Molmil
Structure of FabK (M276A) mutant from Thermotoga maritima
Descriptor: Enoyl-[acyl-carrier-protein] reductase [FMN], SODIUM ION
Authors:Kim, E.E, Shin, S.C, Ha, B.H, Moon, J.H.
Deposit date:2016-09-06
Release date:2017-04-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and biochemical characterization of FabK from Thermotoga maritima.
Biochem. Biophys. Res. Commun., 482, 2017
5GVH
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BU of 5gvh by Molmil
Structure of FabK from Thermotoga maritima
Descriptor: Enoyl-[acyl-carrier-protein] reductase [FMN], FLAVIN MONONUCLEOTIDE, SODIUM ION
Authors:Kim, E.E, Shin, S.C, Ha, B.H, Moon, J.H.
Deposit date:2016-09-05
Release date:2017-06-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.294 Å)
Cite:Structural and biochemical characterization of FabK from Thermotoga maritima.
Biochem. Biophys. Res. Commun., 482, 2017
1MDN
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BU of 1mdn by Molmil
WILD TYPE MYOGLOBIN WITH CO
Descriptor: PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, S.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-12
Release date:1998-09-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
1M6M
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BU of 1m6m by Molmil
V68N MET MYOGLOBIN
Descriptor: PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, S.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-13
Release date:1998-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
1MNO
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BU of 1mno by Molmil
V68N MYOGLOBIN OXY FORM
Descriptor: OXYGEN MOLECULE, PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, S.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-13
Release date:1998-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
1WS0
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BU of 1ws0 by Molmil
Structure analysis of peptide deformylase from Bacillus cereus
Descriptor: NICKEL (II) ION, peptide deformylase 1
Authors:Moon, J.H, Park, J.K, Kim, E.E.
Deposit date:2004-10-29
Release date:2005-09-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure analysis of peptide deformylase from Bacillus cereus
Proteins, 61, 2005
1MWD
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BU of 1mwd by Molmil
WILD TYPE DEOXY MYOGLOBIN
Descriptor: PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, A.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-11
Release date:1998-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
1WS1
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BU of 1ws1 by Molmil
Structure analysis of peptide deformylase from Bacillus cereus
Descriptor: ACTINONIN, NICKEL (II) ION, Peptide deformylase 1
Authors:Moon, J.H, Park, J.K, Kim, E.E.
Deposit date:2004-10-29
Release date:2005-09-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure analysis of peptide deformylase from Bacillus cereus
Proteins, 61, 2005
5FAN
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BU of 5fan by Molmil
Crystal structure of PvHCT in complex with p-coumaroyl-CoA and protocatechuate
Descriptor: 3,4-DIHYDROXYBENZOIC ACID, Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase 2, p-coumaroyl-CoA
Authors:Pereira, J.H, Moriarty, N.W, Eudes, A, Yogiswara, S, Wang, G, Benites, V.T, Baidoo, E.E.K, Lee, T.S, Keasling, J.D, Loque, D, Adams, P.D.
Deposit date:2015-12-11
Release date:2016-02-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Exploiting the Substrate Promiscuity of Hydroxycinnamoyl-CoA:Shikimate Hydroxycinnamoyl Transferase to Reduce Lignin.
Plant Cell.Physiol., 57, 2016
4FDK
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BU of 4fdk by Molmil
F78L Tt H-NOX
Descriptor: Methyl-accepting chemotaxis protein, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Weinert, E.E, Phillips-Piro, C.M, Marletta, M.A.
Deposit date:2012-05-28
Release date:2013-08-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Porphyrin pi-stacking in a heme protein scaffold tunes gas ligand affinity.
J.Inorg.Biochem., 127C, 2013
1L6X
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BU of 1l6x by Molmil
FC FRAGMENT OF RITUXIMAB BOUND TO A MINIMIZED VERSION OF THE B-DOMAIN FROM PROTEIN A CALLED Z34C
Descriptor: IMMUNOGLOBULIN GAMMA-1 HEAVY CHAIN CONSTANT REGION, Minimized B-domain of Protein A Z34C, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Idusogie, E.E, Presta, L.G, Santoro-Gazzano, H, Totpal, K, Wong, P.Y, Ultsch, M, Meng, Y.G, Mullkerrin, M.G.
Deposit date:2002-03-14
Release date:2002-04-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mapping of the C1q binding site on rituxan, a chimeric antibody with a human IgG1 Fc.
J.Immunol., 164, 2000
1VIF
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BU of 1vif by Molmil
STRUCTURE OF DIHYDROFOLATE REDUCTASE
Descriptor: DIHYDROFOLATE REDUCTASE, FOLIC ACID
Authors:Narayana, N, Matthews, D.A, Howell, E.E, Xuong, N.-H.
Deposit date:1996-10-03
Release date:1997-10-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A plasmid-encoded dihydrofolate reductase from trimethoprim-resistant bacteria has a novel D2-symmetric active site.
Nat.Struct.Biol., 2, 1995
1VIE
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BU of 1vie by Molmil
STRUCTURE OF DIHYDROFOLATE REDUCTASE
Descriptor: DIHYDROFOLATE REDUCTASE
Authors:Narayana, N, Matthews, D.A, Howell, E.E, Xuong, N.-H.
Deposit date:1996-10-03
Release date:1997-10-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A plasmid-encoded dihydrofolate reductase from trimethoprim-resistant bacteria has a novel D2-symmetric active site.
Nat.Struct.Biol., 2, 1995
5IRV
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BU of 5irv by Molmil
Human cytochrome P450 17A1 bound to inhibitor VT-464
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Steroid 17-alpha-hydroxylase/17,20 lyase, VT-464
Authors:Scott, E.E, Petrunak, E.M.
Deposit date:2016-03-14
Release date:2017-03-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.098 Å)
Cite:Structural and Functional Evaluation of Clinically Relevant Inhibitors of Steroidogenic Cytochrome P450 17A1.
Drug Metab. Dispos., 45, 2017

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