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PDB: 40966 results

8JXS
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Structure of nanobody-bound DRD1_PF-6142 complex
Descriptor: 4-[3-methyl-4-(6-methylimidazo[1,2-a]pyrazin-5-yl)phenoxy]furo[3,2-c]pyridine, D(1A) dopamine receptor, Fab 8D3 heavy chain, ...
Authors:Zhuang, Y, Xu, Y, Fan, L, Wang, S, Xu, H.E.
Deposit date:2023-07-01
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of psychedelic LSD recognition at dopamine D 1 receptor.
Neuron, 2024
4TKF
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BU of 4tkf by Molmil
Crystal Structure of human Tankyrase 2 in complex with IWR-1.
Descriptor: 3-aminobenzamide, 4-[(3aR,4R,7S,7aS)-1,3-dioxooctahydro-2H-4,7-methanoisoindol-2-yl]-N-(quinolin-8-yl)benzamide, Tankyrase-2, ...
Authors:Qiu, W, Lam, R, Romanov, V, Gordon, R, Gebremeskel, S, Vodsedalek, J, Thompson, C, Beletskaya, I, Battaile, K.P, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-05-26
Release date:2014-11-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into the binding of PARP inhibitors to the catalytic domain of human tankyrase-2.
Acta Crystallogr.,Sect.D, 70, 2014
5CUH
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Crystal structure MMP-9 complexes with a constrained hydroxamate based inhibitor LT4
Descriptor: (4S)-3-{[4-(4-cyano-2-methylphenyl)piperazin-1-yl]sulfonyl}-N-hydroxy-1,3-thiazolidine-4-carboxamide, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Tepshi, L, Vera, L, Nuti, E, Rosalia, L, Rossello, A, Stura, E.A.
Deposit date:2015-07-24
Release date:2016-02-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Discovery of a new selective inhibitor of A Disintegrin And Metalloprotease 10 (ADAM-10) able to reduce the shedding of NKG2D ligands in Hodgkin's lymphoma cell models.
Eur.J.Med.Chem., 111, 2016
6FFJ
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BU of 6ffj by Molmil
Anti-tumor antibody 14F7-derived single chain fragment variable (scFv)
Descriptor: 14F7-derived scFv
Authors:Bjerregaard-Andersen, K, Heggelund, J.E, Krengel, U.
Deposit date:2018-01-08
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of an L chain optimised 14F7 anti-ganglioside Fv suggests a unique tumour-specificity through an unusual H-chain CDR3 architecture.
Sci Rep, 8, 2018
3JAT
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BU of 3jat by Molmil
Cryo-EM structure of GMPCPP-microtubule (14 protofilaments) decorated with kinesin
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
Authors:Zhang, R, Nogales, E.
Deposit date:2015-06-20
Release date:2015-08-12
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanistic Origin of Microtubule Dynamic Instability and Its Modulation by EB Proteins.
Cell(Cambridge,Mass.), 162, 2015
2BEI
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BU of 2bei by Molmil
X-ray structure of thialysine n-acetyltransferase (SSAT2) from homo sapiens
Descriptor: ACETYL COENZYME *A, Diamine acetyltransferase 2
Authors:Wesenberg, G.E, Phillips Jr, G.N, Han, B.W, Bitto, E, Bingman, C.A, Bae, E, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-10-24
Release date:2005-11-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:Crystal structure of Homo sapiens thialysine Nepsilon-acetyltransferase (HsSSAT2) in complex with acetyl coenzyme A.
Proteins, 64, 2006
8JXR
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BU of 8jxr by Molmil
Structure of nanobody-bound DRD1_LSD complex
Descriptor: (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide, D(1A) dopamine receptor, Fab 8D3 heavy chain, ...
Authors:Zhuang, Y, Xu, Y, Fan, L, Wang, S, Xu, H.E.
Deposit date:2023-07-01
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Structural basis of psychedelic LSD recognition at dopamine D 1 receptor.
Neuron, 2024
3ZC0
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BU of 3zc0 by Molmil
Structure of AfC3PO - duplex RNA complex
Descriptor: 5'-R(*UP*UP*CP*GP*AP*CP*GP*CP*GP*UP*CP*GP*AP*AP*UP*U)-3', AFTRAX, CHLORIDE ION, ...
Authors:Parizotto, E.A, Lowe, E.D, Parker, J.S.
Deposit date:2012-11-14
Release date:2013-01-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.982 Å)
Cite:Structural Basis for Duplex RNA Recognition and Cleavage by Archaeoglobus Fulgidus C3Po.
Nat.Struct.Mol.Biol., 20, 2013
8VLL
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BU of 8vll by Molmil
Crystal structure of the yeast cytosine deaminase (yCD) M100W mutant
Descriptor: 1,2-ETHANEDIOL, Cytosine deaminase, PHOSPHATE ION, ...
Authors:Picard, M.-E, Grenier, J, Despres, P.C, Dube, A.K, Landry, C.R, Shi, R.
Deposit date:2024-01-11
Release date:2024-08-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Compensatory mutations potentiate constructive neutral evolution by gene duplication.
Science, 385, 2024
5CW1
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BU of 5cw1 by Molmil
Proteinase K complexed with 4-iodopyrazole
Descriptor: 4-IODOPYRAZOLE, IODIDE ION, Proteinase K, ...
Authors:Bauman, J.D, Arnold, E.
Deposit date:2015-07-27
Release date:2015-12-30
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Rapid experimental SAD phasing and hot spot identification with halogenated fragments
Iucrj, 3, 2016
4P9P
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BU of 4p9p by Molmil
Structure of NavMS in complex with channel blocking compound
Descriptor: BROMIDE ION, DODECAETHYLENE GLYCOL, HEGA-10, ...
Authors:Naylor, C.E, Bagneris, C, Wallace, B.A.
Deposit date:2014-04-04
Release date:2014-06-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Prokaryotic NavMs channel as a structural and functional model for eukaryotic sodium channel antagonism.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PA3
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BU of 4pa3 by Molmil
Structure of NavMS in complex with channel blocking compound
Descriptor: BROMIDE ION, DODECAETHYLENE GLYCOL, HEGA-10, ...
Authors:Naylor, C.E, Bagneris, C, Wallace, B.A.
Deposit date:2014-04-07
Release date:2014-06-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Prokaryotic NavMs channel as a structural and functional model for eukaryotic sodium channel antagonism.
Proc.Natl.Acad.Sci.USA, 111, 2014
7UN2
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BU of 7un2 by Molmil
Crystal structure of a lectin from Canavalia maritima seed (ConM) complexed with Indole-3-butyric acid
Descriptor: 3-INDOLEBUTYRIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:de Sousa, J.P, Bezerra, E.H.S, Sales, M.V, Queiroz, P.P, da Silva, F.M.S, Carvalho, C.P.S, Freire, V.N, Rocha, B.A.M.
Deposit date:2022-04-08
Release date:2023-04-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of Canavalia maritima lectin complexed with auxins
To Be Published
7JT3
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BU of 7jt3 by Molmil
Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Carbone, C.E, Korostelev, A.A.
Deposit date:2020-08-17
Release date:2020-11-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:ArfB can displace mRNA to rescue stalled ribosomes
Nat Commun, 11, 2020
2Q51
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BU of 2q51 by Molmil
Ensemble refinement of the protein crystal structure of an aspartoacylase from Homo sapiens
Descriptor: Aspartoacylase, PHOSPHATE ION, ZINC ION
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
8OHP
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BU of 8ohp by Molmil
Structure of the Fmoc-Tau-PAM4 Type 3 amyloid fibril
Descriptor: Microtubule-associated protein tau
Authors:Wilkinson, M, Louros, N, Tsaka, G, Ramakers, M, Morelli, C, Garcia, T, Gallardo, R.U, D'Haeyer, S, Goossens, V, Audenaert, D, Thal, D.R, Ranson, N.A, Radford, S.E, Rousseau, F, Schymkowitz, J.
Deposit date:2023-03-21
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Local structural preferences in shaping tau amyloid polymorphism.
Nat Commun, 15, 2024
8OI0
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BU of 8oi0 by Molmil
Structure of the Fmoc-Tau-PAM4 Type 4 amyloid fibril
Descriptor: Microtubule-associated protein tau
Authors:Wilkinson, M, Louros, N, Tsaka, G, Ramakers, M, Morelli, C, Garcia, T, Gallardo, R.U, D'Haeyer, S, Goossens, V, Audenaert, D, Thal, D.R, Ranson, N.A, Radford, S.E, Rousseau, F, Schymkowitz, J.
Deposit date:2023-03-21
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Local structural preferences in shaping tau amyloid polymorphism.
Nat Commun, 15, 2024
2Q4K
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BU of 2q4k by Molmil
Ensemble refinement of the protein crystal structure of gene product from Homo sapiens Hs.433573
Descriptor: Uncharacterized protein C11orf68
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
8OHI
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BU of 8ohi by Molmil
Structure of the Fmoc-Tau-PAM4 Type 2 amyloid fibril
Descriptor: Microtubule-associated protein tau
Authors:Wilkinson, M, Louros, N, Tsaka, G, Ramakers, M, Morelli, C, Garcia, T, Gallardo, R.U, D'Haeyer, S, Goossens, V, Audenaert, D, Thal, D.R, Ranson, N.A, Radford, S.E, Rousseau, F, Schymkowitz, J.
Deposit date:2023-03-21
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Local structural preferences in shaping tau amyloid polymorphism.
Nat Commun, 15, 2024
7UOS
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BU of 7uos by Molmil
Structure of WNK1 inhibitor complex
Descriptor: 1,2-ETHANEDIOL, 4-[bromo(dichloro)methanesulfonyl]-N-cyclohexyl-2-nitroaniline, Serine/threonine-protein kinase WNK1
Authors:Akella, R, Goldsmith, E.J, Akella, R.
Deposit date:2022-04-13
Release date:2023-04-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of WNK1 inhibitor complex
To Be Published
8VTY
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BU of 8vty by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ciprofloxacin and protein Y at 2.60A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID, 16S Ribosomal RNA, ...
Authors:Aleksandrova, E.V, Ma, C.-X, Klepacki, D, Alizadeh, F, Vazquez-Laslop, N, Liang, J.-H, Polikanov, Y.S, Mankin, A.S.
Deposit date:2024-01-27
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Macrolones target bacterial ribosomes and DNA gyrase and can evade resistance mechanisms.
Nat.Chem.Biol., 2024
7UUJ
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BU of 7uuj by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with gentamicin
Descriptor: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 1,2-ETHANEDIOL, Aminocyclitol acetyltransferase ApmA, ...
Authors:Stogios, P.J, Evdokimova, E, Osipiuk, J, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2023-04-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of aminoglycoside resistance enzyme ApmA, complex with gentamicin
To Be Published
8VLM
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BU of 8vlm by Molmil
Crystal structure of the yeast cytosine deaminase (yCD) E64V-M100W heterodimer
Descriptor: 1,2-ETHANEDIOL, Cytosine deaminase, ZINC ION
Authors:Picard, M.-E, Grenier, G, Despres, P.C, Dube, A.K, Landry, C.R, Shi, R.
Deposit date:2024-01-11
Release date:2024-08-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Compensatory mutations potentiate constructive neutral evolution by gene duplication.
Science, 385, 2024
3JCR
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BU of 3jcr by Molmil
3D structure determination of the human*U4/U6.U5* tri-snRNP complex
Descriptor: LSm2, LSm3, LSm4, ...
Authors:Agafonov, D.E, Kastner, B, Dybkov, O, Hofele, R.V, Liu, W.T, Urlaub, H, Luhrmann, R, Stark, H.
Deposit date:2016-01-21
Release date:2016-03-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Molecular architecture of the human U4/U6.U5 tri-snRNP.
Science, 351, 2016
1M6C
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BU of 1m6c by Molmil
V68N MYOGLOBIN WITH CO
Descriptor: CARBON MONOXIDE, PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, S.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-12
Release date:1998-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998

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