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PDB: 41042 results

7A4R
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BU of 7a4r by Molmil
Structure of DYRK1A in complex with compound 1
Descriptor: 2-amino-3H,4H,7H-pyrrolo[2,3-d]pyrimidin-4-one, DIMETHYL SULFOXIDE, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
7A55
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BU of 7a55 by Molmil
Structure of DYRK1A in complex with compound 8
Descriptor: 3-(1-methylpyrazol-4-yl)-1~{H}-pyrazole-5-carboxylic acid, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
7A4W
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BU of 7a4w by Molmil
Structure of DYRK1A in complex with compound 3
Descriptor: 6-(4-methoxyphenyl)pyrimidine-2,4-diamine, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
7A52
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BU of 7a52 by Molmil
Structure of DYRK1A in complex with compound 6
Descriptor: 3-phenyl-1H,4H,5H-pyrazolo[3,4-d]pyrimidin-4-one, DIMETHYL SULFOXIDE, Dual specificity tyrosine-phosphorylation-regulated kinase 1A, ...
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
7A5N
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BU of 7a5n by Molmil
Structure of DYRK1A in complex with compound 34
Descriptor: 5-(2-azanylpyridin-4-yl)-~{N}-[[2,6-bis(fluoranyl)phenyl]methyl]-2-methyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-amine, CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-21
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
7A5D
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BU of 7a5d by Molmil
Structure of DYRK1A in complex with compound 16
Descriptor: 4-azanyl-2-methyl-6-pyridin-3-yl-7~{H}-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-21
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
7A5B
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BU of 7a5b by Molmil
Structure of DYRK1A in complex with complex 10
Descriptor: 4-(4-methoxy-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-2-amine, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
5MH3
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BU of 5mh3 by Molmil
Crystal structure of a DM9 domain containing protein from Crassostrea gigas with K43A mutation
Descriptor: GLYCEROL, Natterin-3
Authors:Weinert, T, Warkentin, E, Pang, G.
Deposit date:2016-11-22
Release date:2017-12-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DM9 Domain Containing Protein Functions As a Pattern Recognition Receptor with Broad Microbial Recognition Spectrum.
Front Immunol, 8, 2017
6XCO
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BU of 6xco by Molmil
Immune receptor complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CACODYLATE ION, GLYCEROL, ...
Authors:Tran, T.M, Faridi, P, Lim, J.J, Ting, T.Y, Onwukwe, G, Bhattacharjee, P, Jones, M.C, Tresoldi, E, Cameron, J.F, La-Gruta, L.N, Purcell, W.A, Mannering, I.S, Rossjohn, J, Reid, H.H.
Deposit date:2020-06-08
Release date:2021-07-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:T cell receptor recognition of hybrid insulin peptides bound to HLA-DQ8.
Nat Commun, 12, 2021
7MMN
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BU of 7mmn by Molmil
Crystal Structure of the Prefusion RSV F Glycoprotein bound by human antibody AM14
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AM14 Fab Heavy Chain, AM14 Fab Light Chain, ...
Authors:Harshbarger, W, Malito, E.
Deposit date:2021-04-29
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.57 Å)
Cite:Improved epitope resolution of the prefusion trimer-specific antibody AM14 bound to the RSV F glycoprotein.
Mabs, 13, 2021
6ZZ2
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BU of 6zz2 by Molmil
Cocktail experiment E: fragments 52, 58, and 63 at 90 mM concentration in complex with Endothiapepsin
Descriptor: DIMETHYL SULFOXIDE, Endothiapepsin, GLYCEROL, ...
Authors:Hassaan, E, Klebe, G, Heine, A, Schiebel, J, Koester, H.
Deposit date:2020-08-03
Release date:2021-08-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.14885437 Å)
Cite:Cocktail experiment E: fragments 52, 58, and 63 at 90 mM concentration in complex with Endothiapepsin
To Be Published
8VJI
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BU of 8vji by Molmil
Cryo-EM of capsid of bacteriophage Chi
Descriptor: Decorator protein D, Major capsid protein
Authors:Sonani, R.R, Esteves, N.C, Scharf, B.E, Egelman, E.H.
Deposit date:2024-01-06
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of flagellotropic bacteriophage Chi.
Structure, 32, 2024
7A03
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BU of 7a03 by Molmil
The Structure of CHT
Descriptor: CITRIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Fernandes, G, Machado, E, Pereira, M, Brear, P, Lemos, E.
Deposit date:2020-08-06
Release date:2021-08-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Exploring the genome of Chitinophaga (CB10) for metalocarboxipeptidase activity
To Be Published
8VHX
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BU of 8vhx by Molmil
Cryo-EM of neck of bacteriophage Chi
Descriptor: Neck 1, Neck 2, Portal, ...
Authors:Sonani, R.R, Esteves, N.C, Scharf, B.E, Egelman, E.H.
Deposit date:2024-01-02
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structure of flagellotropic bacteriophage Chi.
Structure, 32, 2024
4R88
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BU of 4r88 by Molmil
Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-fluorocytosine
Descriptor: 1,2-ETHANEDIOL, 5-fluorocytosine, ACETIC ACID, ...
Authors:Fedorov, A.A, Fedorov, E.V, Hitchcock, D.S, Raushel, F.M, Almo, S.C.
Deposit date:2014-08-29
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-fluorocytosine
To be Published
8BNA
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BU of 8bna by Molmil
BINDING OF HOECHST 33258 TO THE MINOR GROOVE OF B-DNA
Descriptor: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Pjura, P.E, Grzeskowiak, K, Dickerson, R.E.
Deposit date:1986-08-29
Release date:1987-01-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Binding of Hoechst 33258 to the minor groove of B-DNA.
J.Mol.Biol., 197, 1987
6V3D
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BU of 6v3d by Molmil
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit
Descriptor: 23s ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2019-11-25
Release date:2020-02-05
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Cryo-electron Microscopy Structure of the Acinetobacter baumannii 70S Ribosome and Implications for New Antibiotic Development.
Mbio, 11, 2020
6V6K
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BU of 6v6k by Molmil
EGFR(T790M/V948R) in complex with LN2057
Descriptor: CHLORIDE ION, Epidermal growth factor receptor, N-[3-({4-[4-(4-fluorophenyl)-2-(methylsulfanyl)-1H-imidazol-5-yl]pyridin-2-yl}amino)-4-methoxyphenyl]propanamide
Authors:Heppner, D.E, Eck, M.J.
Deposit date:2019-12-05
Release date:2020-04-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for EGFR Mutant Inhibition by Trisubstituted Imidazole Inhibitors.
J.Med.Chem., 63, 2020
4QR9
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BU of 4qr9 by Molmil
Crystal structure of two HMGB1 Box A domains cooperating to underwind and kink a DNA
Descriptor: DNA (5'-D(*AP*TP*AP*TP*CP*GP*AP*TP*AP*T)-3'), High mobility group protein B1, MAGNESIUM ION
Authors:Sanchez-Giraldo, R, Acosta-Reyes, F.J, Malarkey, C.S, Saperas, N, Churchill, M.E.A, Campos, J.L.
Deposit date:2014-06-30
Release date:2015-07-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two high-mobility group box domains act together to underwind and kink DNA.
Acta Crystallogr.,Sect.D, 71, 2015
6POL
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BU of 6pol by Molmil
Crystal structure of the human NELL1 EGF1-3-Robo3 FN1 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Wang, J, Pak, J.S, Ozkan, E.
Deposit date:2019-07-04
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:NELL2-Robo3 complex structure reveals mechanisms of receptor activation for axon guidance.
Nat Commun, 11, 2020
7ABL
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BU of 7abl by Molmil
HBV pgRNA T=4 NCP icosahedral symmetry
Descriptor: Capsid protein
Authors:Patel, N, Clark, S, Weis, E.U, Mata, C.P, Bohon, J, Farquhar, E, Ranson, N.A, Twarock, R, Stockley, P.G.
Deposit date:2020-09-07
Release date:2021-10-27
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:In vitro functional analysis of gRNA sites regulating assembly of hepatitis B virus.
Commun Biol, 4, 2021
6V3B
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BU of 6v3b by Molmil
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state
Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2019-11-25
Release date:2020-02-05
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Cryo-electron Microscopy Structure of the Acinetobacter baumannii 70S Ribosome and Implications for New Antibiotic Development.
Mbio, 11, 2020
6AN2
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BU of 6an2 by Molmil
STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 7.5
Descriptor: 2',3'-DEHYDRO-2',3'-DEOXY-THYMIDINE 5'-TRIPHOSPHATE, DNA PRIMER (5'- D(*AP*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*GP)-3'), DNA TEMPLATE (5'- D(*AP*TP*GP*AP*AP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3'), ...
Authors:Martinez, S.E, Das, K, Arnold, E.
Deposit date:2017-08-11
Release date:2018-08-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of HIV-1 reverse transcriptase/d4TTP complex: Novel DNA cross-linking site and pH-dependent conformational changes.
Protein Sci., 28, 2019
8DNR
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BU of 8dnr by Molmil
Prefusion-stabilized Hendra virus fusion protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0
Authors:Byrne, P.O, Blade, E.G, McLellan, J.S.
Deposit date:2022-07-11
Release date:2023-07-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Prefusion stabilization of the Hendra and Langya virus F proteins.
J.Virol., 98, 2024
8DO4
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BU of 8do4 by Molmil
Prefusion-stabilized Nipah virus fusion protein, dimer of trimers
Descriptor: Fusion glycoprotein F0
Authors:Byrne, P.O, Blade, E.G, McLellan, J.S.
Deposit date:2022-07-12
Release date:2023-07-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Prefusion stabilization of the Hendra and Langya virus F proteins.
J.Virol., 98, 2024

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數據於2024-10-09公開中

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