Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 40736 件

7P3Z
DownloadVisualize
BU of 7p3z by Molmil
Homology model of the full-length AP-3 complex in a stretched open conformation
分子名称: AP complex subunit sigma, AP-3 complex subunit delta, AP-3 complex subunit mu, ...
著者Schubert, E, Raunser, S.
登録日2021-07-09
公開日2021-09-29
最終更新日2021-12-08
実験手法ELECTRON MICROSCOPY (10.5 Å)
主引用文献Flexible open conformation of the AP-3 complex explains its role in cargo recruitment at the Golgi.
J.Biol.Chem., 297, 2021
8B1U
DownloadVisualize
BU of 8b1u by Molmil
RecBCD-DNA in complex with the phage protein Abc2 and host PpiB
分子名称: Anti-RecBCD protein 2, DNA (70-MER), MAGNESIUM ION, ...
著者Wilkinson, M, Wilkinson, O.J, Feyerherm, C, Fletcher, E.E, Wigley, D.B, Dillingham, M.S.
登録日2022-09-12
公開日2022-12-28
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structures of RecBCD in complex with phage-encoded inhibitor proteins reveal distinctive strategies for evasion of a bacterial immunity hub.
Elife, 11, 2022
6VON
DownloadVisualize
BU of 6von by Molmil
Chloroplast ATP synthase (R1, CF1FO)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ...
著者Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L.
登録日2020-01-30
公開日2020-09-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structural basis of redox modulation on chloroplast ATP synthase.
Commun Biol, 3, 2020
6VYF
DownloadVisualize
BU of 6vyf by Molmil
Cryo-EM structure of Plasmodium vivax hexokinase (Open state)
分子名称: Phosphotransferase
著者Srivastava, S.S, Darling, J.E, Suryadi, J, Morris, J.C, Drew, M.E, Subramaniam, S.
登録日2020-02-26
公開日2020-05-06
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Plasmodium vivax and human hexokinases share similar active sites but display distinct quaternary architectures
Iucrj, 7, 2020
4YSO
DownloadVisualize
BU of 4yso by Molmil
Copper nitrite reductase from Geobacillus thermodenitrificans - 0.064 MGy
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ...
著者Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E.
登録日2015-03-17
公開日2016-02-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
2N0J
DownloadVisualize
BU of 2n0j by Molmil
Solution NMR Structure of the 27 nucleotide engineered neomycin sensing riboswitch RNA-ribostamycin complex
分子名称: RIBOSTAMYCIN, RNA_(27-MER)
著者Duchardt-Ferner, E, Gottstein-Schmidtke, S.R, Weigand, J.E, Ohlenschlaeger, O.E, Wurm, J, Hammann, C, Suess, B, Woehnert, J.
登録日2015-03-09
公開日2016-02-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献What a Difference an OH Makes: Conformational Dynamics as the Basis for the Ligand Specificity of the Neomycin-Sensing Riboswitch.
Angew.Chem.Int.Ed.Engl., 55, 2016
7OTD
DownloadVisualize
BU of 7otd by Molmil
Oxytocin NMR solution structure
分子名称: AMINO GROUP, COPPER (II) ION, UNK-TYR-ILE-GLN-ASN-CYS-PRO-LEU-GLY
著者Shalev, D.E, Alshanski, I, Yitzchaik, S, Hurevich, M.
登録日2021-06-10
公開日2021-10-13
実験手法SOLUTION NMR
主引用文献Determining the structure and binding mechanism of oxytocin-Cu 2+ complex using paramagnetic relaxation enhancement NMR analysis.
J.Biol.Inorg.Chem., 26, 2021
7P9T
DownloadVisualize
BU of 7p9t by Molmil
Crystal structure of CD73 in complex with dCMP in the open form
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, 5'-nucleotidase, CALCIUM ION, ...
著者Scaletti, E.R, Strater, N.
登録日2021-07-27
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Substrate binding modes of purine and pyrimidine nucleotides to human ecto-5'-nucleotidase (CD73) and inhibition by their bisphosphonic acid derivatives.
Purinergic Signal, 17, 2021
7U5P
DownloadVisualize
BU of 7u5p by Molmil
CRYSTAL STRUCTURE OF THE ACTIVIN RECEPTOR TYPE-2A LIGAND BINDING DOMAIN IN COMPLEX WITH ACTIVIN-A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Activin receptor type-2A, Inhibin beta A chain
著者Chu, K.Y, Malik, A, Thamilselvan, V, Martinez-Hackert, E.
登録日2022-03-02
公開日2022-06-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Type II BMP and activin receptors BMPR2 and ACVR2A share a conserved mode of growth factor recognition.
J.Biol.Chem., 298, 2022
7PB5
DownloadVisualize
BU of 7pb5 by Molmil
Crystal structure of CD73 in complex with UMP in the open form
分子名称: 5'-nucleotidase, CALCIUM ION, GLYCEROL, ...
著者Scaletti, E.R, Strater, N.
登録日2021-07-30
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Substrate binding modes of purine and pyrimidine nucleotides to human ecto-5'-nucleotidase (CD73) and inhibition by their bisphosphonic acid derivatives.
Purinergic Signal, 17, 2021
3J89
DownloadVisualize
BU of 3j89 by Molmil
Structural Plasticity of Helical Nanotubes Based on Coiled-Coil Assemblies
分子名称: synthetic peptide
著者Egelman, E.H, Xu, C, DiMaio, F, Magnotti, E, Modlin, C, Yu, X, Wright, E, Baker, D, Conticello, V.P.
登録日2014-10-07
公開日2015-02-11
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural plasticity of helical nanotubes based on coiled-coil assemblies.
Structure, 23, 2015
7BOE
DownloadVisualize
BU of 7boe by Molmil
Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Lopez-Alonso, J, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.R.
登録日2021-01-25
公開日2021-12-08
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7PA4
DownloadVisualize
BU of 7pa4 by Molmil
Crystal structure of CD73 in complex with CMP in the open form
分子名称: 5'-nucleotidase, CALCIUM ION, CHLORIDE ION, ...
著者Scaletti, E.R, Strater, N.
登録日2021-07-28
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Substrate binding modes of purine and pyrimidine nucleotides to human ecto-5'-nucleotidase (CD73) and inhibition by their bisphosphonic acid derivatives.
Purinergic Signal, 17, 2021
5UWF
DownloadVisualize
BU of 5uwf by Molmil
Crystal structure of human PDE10A in complex with inhibitor 16d
分子名称: 9-[(1S)-2,2-difluorocyclopropane-1-carbonyl]-6-[(4-methoxyphenyl)methyl]-8,9,10,11-tetrahydropyrido[4',3':4,5]thieno[3,2-e][1,2,4]triazolo[1,5-c]pyrimidin-5(6H)-one, MAGNESIUM ION, ZINC ION, ...
著者Xu, R, Cedervall, E.P, Sridhar, V, Barker, R, Aertgeerts, K.
登録日2017-02-21
公開日2017-04-26
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Discovery of Selective Phosphodiesterase 1 Inhibitors with Memory Enhancing Properties.
J. Med. Chem., 60, 2017
7PBA
DownloadVisualize
BU of 7pba by Molmil
Crystal structure of CD73 in complex with IMP in the open form
分子名称: 5'-nucleotidase, CALCIUM ION, GLYCEROL, ...
著者Scaletti, E.R, Strater, N.
登録日2021-08-01
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Substrate binding modes of purine and pyrimidine nucleotides to human ecto-5'-nucleotidase (CD73) and inhibition by their bisphosphonic acid derivatives.
Purinergic Signal, 17, 2021
7PBB
DownloadVisualize
BU of 7pbb by Molmil
Crystal structure of CD73 in complex with caffeine in the open form
分子名称: 5'-nucleotidase, CAFFEINE, CALCIUM ION, ...
著者Scaletti, E.R, Strater, N.
登録日2021-08-01
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Substrate binding modes of purine and pyrimidine nucleotides to human ecto-5'-nucleotidase (CD73) and inhibition by their bisphosphonic acid derivatives.
Purinergic Signal, 17, 2021
7P9N
DownloadVisualize
BU of 7p9n by Molmil
Crystal structure of CD73 in complex with AMP in the open form
分子名称: 5'-nucleotidase, ADENOSINE MONOPHOSPHATE, CALCIUM ION, ...
著者Scaletti, E.R, Strater, N.
登録日2021-07-27
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Substrate binding modes of purine and pyrimidine nucleotides to human ecto-5'-nucleotidase (CD73) and inhibition by their bisphosphonic acid derivatives.
Purinergic Signal, 17, 2021
3J6F
DownloadVisualize
BU of 3j6f by Molmil
Minimized average structure of GDP-bound dynamic microtubules
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Alushin, G.M, Lander, G.C, Kellogg, E.H, Zhang, R, Baker, D, Nogales, E.
登録日2014-02-19
公開日2014-06-04
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献High-Resolution Microtubule Structures Reveal the Structural Transitions in alpha beta-Tubulin upon GTP Hydrolysis.
Cell(Cambridge,Mass.), 157, 2014
5EUZ
DownloadVisualize
BU of 5euz by Molmil
Rat prestin STAS domain in complex with iodide
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, IODIDE ION, ...
著者Lolli, G, Pasqualetto, E, Costanzi, E, Bonetto, G, Battistutta, R.
登録日2015-11-19
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.403 Å)
主引用文献The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site.
Biochem.J., 473, 2016
7P9R
DownloadVisualize
BU of 7p9r by Molmil
Crystal structure of CD73 in complex with GMP in the open form
分子名称: 5'-nucleotidase, CALCIUM ION, GLYCEROL, ...
著者Scaletti, E.R, Strater, N.
登録日2021-07-27
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Substrate binding modes of purine and pyrimidine nucleotides to human ecto-5'-nucleotidase (CD73) and inhibition by their bisphosphonic acid derivatives.
Purinergic Signal, 17, 2021
6W6N
DownloadVisualize
BU of 6w6n by Molmil
K106L/A131E mutant of cytochrome P460 from Nitrosomonas sp. AL212
分子名称: Cytochrome P460, HEME C
著者Coleman, R.E, Lancaster, K.M.
登録日2020-03-17
公開日2020-06-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The Heme-Lys Cross-Link in Cytochrome P460 Promotes Catalysis by Enforcing Secondary Coordination Sphere Architecture.
Biochemistry, 59, 2020
7PCP
DownloadVisualize
BU of 7pcp by Molmil
Crystal structure of CD73 in complex with 5-iodouracil in the open form
分子名称: 5'-nucleotidase, 5-IODOURACIL, CALCIUM ION, ...
著者Scaletti, E.R, Strater, N.
登録日2021-08-03
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.377 Å)
主引用文献Substrate binding modes of purine and pyrimidine nucleotides to human ecto-5'-nucleotidase (CD73) and inhibition by their bisphosphonic acid derivatives.
Purinergic Signal, 17, 2021
7PBY
DownloadVisualize
BU of 7pby by Molmil
Crystal structure of CD73 in complex with 4-nitrocatechol in the open form
分子名称: 4-NITROCATECHOL, 5'-nucleotidase, CALCIUM ION, ...
著者Scaletti, E.R, Strater, N.
登録日2021-08-02
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Substrate binding modes of purine and pyrimidine nucleotides to human ecto-5'-nucleotidase (CD73) and inhibition by their bisphosphonic acid derivatives.
Purinergic Signal, 17, 2021
5KR9
DownloadVisualize
BU of 5kr9 by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with Coumestrol
分子名称: Coumestrol, Estrogen receptor, NCOA2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-07-07
公開日2017-02-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
5KRM
DownloadVisualize
BU of 5krm by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with the A-CD ring estrogen, (1S,7aS)-5-(2,5-difluoro-4-hydroxyphenyl)-7a-methyl-2,3,3a,4,7,7a-hexahydro-1H-inden-1-ol
分子名称: (1~{S},3~{a}~{R},7~{a}~{S})-5-[2,5-bis(fluoranyl)-4-oxidanyl-phenyl]-7~{a}-methyl-1,2,3,3~{a},4,7-hexahydroinden-1-ol, Estrogen receptor, NCOA2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-07-07
公開日2017-01-18
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon