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PDB: 40736 件

4TUY
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Tubulin-Rhizoxin complex
分子名称: (1R,2R,3E,5R,7R,8S,10S,13E,16R)-8-hydroxy-10-[(2S,3R,4E,6E,8E)-3-methoxy-4,8-dimethyl-9-(2-methyl-1,3-oxazol-4-yl)nona-4,6,8-trien-2-yl]-2,7-dimethyl-6,11,19-trioxatricyclo[14.3.1.0~5,7~]icosa-3,13-diene-12,18-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Prota, A.E, Bargsten, K, Diaz, J.F, Marsh, M, Cuevas, C, Liniger, M, Neuhaus, C, Andreu, J.M, Altmann, K.H, Steinmetz, M.O.
登録日2014-06-25
公開日2014-08-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A new tubulin-binding site and pharmacophore for microtubule-destabilizing anticancer drugs.
Proc.Natl.Acad.Sci.USA, 111, 2014
4ZIG
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Crystal Structure of core/latch dimer of Bax in complex with BidBH3mini
分子名称: Apoptosis regulator BAX, BH3-interacting domain death agonist
著者Robin, A.Y, Krishna Kumar, K, Westphal, D, Wardak, A.Z, Thompson, G.V, Dewson, G, Colman, P.M, Czabotar, P.E.
登録日2015-04-28
公開日2015-07-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Bax bound to the BH3 peptide of Bim identifies important contacts for interaction.
Cell Death Dis, 6, 2015
1A6A
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THE STRUCTURE OF AN INTERMEDIATE IN CLASS II MHC MATURATION: CLIP BOUND TO HLA-DR3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, DR alpha chain, ...
著者Ghosh, P, Amaya, M, Mellins, E, Wiley, D.C.
登録日1998-02-22
公開日1998-05-27
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The structure of an intermediate in class II MHC maturation: CLIP bound to HLA-DR3.
Nature, 378, 1995
4ZN5
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YopH W354Y Yersinia enterocolitica PTPase bond with Divanadate glycerol ester in the active site
分子名称: ACETATE ION, Divanadate Glycerol ester, GLYCEROL, ...
著者Moise, G.E, Johnson, S.J, Hengge, A.C.
登録日2015-05-04
公開日2015-10-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Conservative Tryptophan Mutants of the Protein Tyrosine Phosphatase YopH Exhibit Impaired WPD-Loop Function and Crystallize with Divanadate Esters in Their Active Sites.
Biochemistry, 54, 2015
182D
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DNA-NOGALAMYCIN INTERACTIONS: THE CRYSTAL STRUCTURE OF D(TGATCA) COMPLEXED WITH NOGALAMYCIN
分子名称: DNA (5'-D(*TP*GP*AP*TP*CP*A)-3'), NOGALAMYCIN
著者Smith, C.K, Davies, G.J, Dodson, E.J, Moore, M.H.
登録日1994-07-28
公開日1994-11-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献DNA-nogalamycin interactions: the crystal structure of d(TGATCA) complexed with nogalamycin.
Biochemistry, 34, 1995
1A5A
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CRYO-CRYSTALLOGRAPHY OF A TRUE SUBSTRATE, INDOLE-3-GLYCEROL PHOSPHATE, BOUND TO A MUTANT (ALPHAD60N) TRYPTOPHAN SYNTHASE ALPHA2BETA2 COMPLEX REVEALS THE CORRECT ORIENTATION OF ACTIVE SITE ALPHA GLU 49
分子名称: POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE, TRYPTOPHAN SYNTHASE (ALPHA CHAIN), ...
著者Rhee, S, Miles, E.W, Davies, D.R.
登録日1998-02-12
公開日1998-05-27
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Cryo-crystallography of a true substrate, indole-3-glycerol phosphate, bound to a mutant (alphaD60N) tryptophan synthase alpha2beta2 complex reveals the correct orientation of active site alphaGlu49.
J.Biol.Chem., 273, 1998
4TV6
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Crystal Structure of Citrate Synthase Variant SbnG E151Q
分子名称: 2-dehydro-3-deoxyglucarate aldolase, OXALOACETATE ION
著者Kobylarz, M.J, Grigg, J.C, Murphy, M.E.P.
登録日2014-06-26
公開日2014-10-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献SbnG, a Citrate Synthase in Staphylococcus aureus: A NEW FOLD ON AN OLD ENZYME.
J.Biol.Chem., 289, 2014
4ZUJ
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Crystal structure of Staphylococcal nuclease variant Delta+PHS Y91H at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Sorenson, J.L, Schlessman, J.L, Garcia-Moreno E, B.
登録日2015-05-16
公開日2015-05-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal structure of Staphylococcal nuclease variant Delta+PHS Y91H at cryogenic temperature
To be Published
196D
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CRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTION
分子名称: CALCIUM ION, DNA (5'-D(*CP*TP*CP*TP*CP*GP*AP*GP*AP*G)-3')
著者Goodsell, D.S, Grzeskowiak, K, Dickerson, R.E.
登録日1994-11-07
公開日1995-02-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of C-T-C-T-C-G-A-G-A-G. Implications for the structure of the Holliday junction.
Biochemistry, 34, 1995
4ZTG
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Ebola virus nucleoprotein bound to VP35 chaperoning peptide P22121
分子名称: Polymerase cofactor VP35,Nucleoprotein fusion protein
著者Kirchdoerfer, R.N, Abelson, D.M, Saphire, E.O.
登録日2015-05-14
公開日2015-05-27
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Ebola virus nucleoprotein bound to VP35 chaperoning peptide P22121
to be published
4TV5
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Crystal Structure of Citrate Synthase SbnG
分子名称: 2-dehydro-3-deoxyglucarate aldolase, CALCIUM ION
著者Kobylarz, M.J, Grigg, J.C, Murphy, M.E.P.
登録日2014-06-25
公開日2014-10-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献SbnG, a Citrate Synthase in Staphylococcus aureus: A NEW FOLD ON AN OLD ENZYME.
J.Biol.Chem., 289, 2014
1AES
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SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (IMIDAZOLE)
分子名称: CYTOCHROME C PEROXIDASE, IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE
著者Musah, R.A, Jensen, G.M, Fitzgerald, M.M, Mcree, D.E, Goodin, D.B.
登録日1997-02-25
公開日1997-09-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A ligand-gated, hinged loop rearrangement opens a channel to a buried artificial protein cavity.
Nat.Struct.Biol., 3, 1996
1AC8
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VARIATION IN THE STRENGTH OF A CH TO O HYDROGEN BOND IN AN ARTIFICIAL PROTEIN CAVITY (3,4,5-TRIMETHYLTHIAZOLE)
分子名称: 3,4,5-TRIMETHYL-1,3-THIAZOLE, CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
著者Musah, R.A, Jensen, G.M, Bunte, S.W, Rosenfeld, R, Mcree, D.E, Goodin, D.B.
登録日1997-02-14
公開日1997-09-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Variation in strength of an unconventional C-H to O hydrogen bond in an engineered protein cavity
J.Am.Chem.Soc., 119, 1997
1AEV
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INTRODUCTION OF NOVEL SUBSTRATE OXIDATION INTO CYTOCHROME C PEROXIDASE BY CAVITY COMPLEMENTATION: OXIDATION OF 2-AMINOTHIAZOLE AND COVALENT MODIFICATION OF THE ENZYME (2-AMINOTHIAZOLE)
分子名称: 2-AMINOTHIAZOLE, CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
著者Musah, R.A, Fitzgerald, M.M, Jensen, G.M, Mcree, D.E, Goodin, D.B.
登録日1997-02-25
公開日1997-09-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Introduction of novel substrate oxidation into cytochrome c peroxidase by cavity complementation: oxidation of 2-aminothiazole and covalent modification of the enzyme.
Biochemistry, 36, 1997
4ZTI
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Ebola virus nucleoprotein bound to VP35 chaperoning peptide P212121
分子名称: Polymerase cofactor VP35,Nucleoprotein
著者Kirchdoerfer, R.N, Abelson, D.M, Saphire, E.O.
登録日2015-05-14
公開日2015-05-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Ebola virus nucleoprotein bound to VP35 chaperoning peptide P212121
to be published
5ABK
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BU of 5abk by Molmil
Structure of the N-terminal domain of the metalloprotease PrtV from Vibrio cholerae
分子名称: METALLOPROTEASE
著者Persson, C, Mayzel, M, Edwin, A, Wai, S.N, Ohman, A, Sauer-Eriksson, A.E, Karlsson, G.
登録日2015-08-06
公開日2015-08-26
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structure of the N-Terminal Domain of the Metalloprotease Prtv from Vibrio Cholerae.
Protein Sci., 24, 2015
4ZV1
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An ancestral arginine-binding protein bound to arginine
分子名称: ARGININE, AncQR
著者Clifton, B.E, Carr, P.D, Jackson, C.J.
登録日2015-05-18
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Ancestral Protein Reconstruction Yields Insights into Adaptive Evolution of Binding Specificity in Solute-Binding Proteins.
Cell Chem Biol, 23, 2016
4ZV2
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An ancestral arginine-binding protein bound to glutamine
分子名称: AncQR, GLUTAMINE
著者Clifton, B.E, Jackson, C.J.
登録日2015-05-18
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Ancestral Protein Reconstruction Yields Insights into Adaptive Evolution of Binding Specificity in Solute-Binding Proteins.
Cell Chem Biol, 23, 2016
4U4H
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Crystal Structure of HSV-1 UL21 N-terminal Domain
分子名称: Tegument protein UL21
著者Metrick, C.M, Heldwein, E.E.
登録日2014-07-23
公開日2015-01-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The Unusual Fold of Herpes Simplex Virus 1 UL21, a Multifunctional Tegument Protein.
J.Virol., 89, 2015
150D
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GUANINE.1,N6-ETHENOADENINE BASE-PAIRS IN THE CRYSTAL STRUCTURE OF D(CGCGAATT(EDA)GCG)
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(EDA)P*GP*CP*G)-3'), MAGNESIUM ION
著者Leonard, G.A, McAuley-Hecht, K.E, Gibson, N.J, Brown, T, Watson, W.P, Hunter, W.N.
登録日1993-12-02
公開日1994-05-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Guanine-1,N6-ethenoadenine base pairs in the crystal structure of d(CGCGAATT(epsilon dA)GCG).
Biochemistry, 33, 1994
165D
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THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE
分子名称: DNA/RNA (5'-R(*GP*CP*UP*UP*CP*GP*GP*CP*)-D(*(BRU))-3'), RHODIUM HEXAMINE ION
著者Cruse, W, Saludjian, P, Biala, E, Strazewski, P, Prange, T, Kennard, O.
登録日1994-03-21
公開日1994-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of a mispaired RNA double helix at 1.6-A resolution and implications for the prediction of RNA secondary structure.
Proc.Natl.Acad.Sci.USA, 91, 1994
1AMH
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UNCOMPLEXED RAT TRYPSIN MUTANT WITH ASP 189 REPLACED WITH SER (D189S)
分子名称: ANIONIC TRYPSIN, CALCIUM ION
著者Szabo, E, Bocskei, Z.S, Naray-Szabo, G, Graf, L.
登録日1997-06-17
公開日1997-12-24
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The three-dimensional structure of Asp189Ser trypsin provides evidence for an inherent structural plasticity of the protease.
Eur.J.Biochem., 263, 1999
4ZTA
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Ebola virus nucleoprotein bound to VP35 chaperoning peptide I212121
分子名称: Polymerase cofactor VP35,Nucleoprotein
著者Kirchdoerfer, R.N, Abelson, D.M, Saphire, E.O.
登録日2015-05-14
公開日2015-05-27
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Ebola virus nucleoprotein bound to VP35 chaperoning peptide I212121
to be published
4TUE
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Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fagan, C.E, Dunham, C.M.
登録日2014-06-24
公開日2015-05-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural insights into translational recoding by frameshift suppressor tRNASufJ.
Rna, 20, 2014
4TX4
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Crystal Structure of a Single-Domain Cysteine Protease Inhibitor from Cowpea (Vigna unguiculata)
分子名称: Cysteine proteinase inhibitor, SULFATE ION
著者Pereira, H.M, Valadares, N, Monteiro-Junior, J.E, Carvalho, C.P.S, Grangeiro, T.B.
登録日2014-07-02
公開日2015-10-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Expression in Escherichia coli of cysteine protease inhibitors from cowpea (Vigna unguiculata): The crystal structure of a single-domain cystatin gives insights on its thermal and pH stability.
Int. J. Biol. Macromol., 102, 2017

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