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PDB: 148 件
6D6O
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BU of 6d6o by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 17
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl octanoate, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-21
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
5W8A
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BU of 5w8a by Molmil
The structure of a COA-dependent acyl-homoserine lactone synthase, BjaI, with SAM and isopentyl-CoA
分子名称: Autoinducer synthase, S-ADENOSYLMETHIONINE, isopentyl-Coenzyme A
著者Dong, S.-H, Nair, S.K.
登録日2017-06-21
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for the substrate specificity of quorum signal synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5W8E
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BU of 5w8e by Molmil
The structure of a CoA-dependent acyl-homoserine lactone synthase, BjaI, with the adduct of SAH and IV-CoA
分子名称: (2S)-4-({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}sulfanyl)-2-[(3-methylbutanoyl)amino]butanoic acid, ADENINE, Autoinducer synthase, ...
著者Dong, S.-H, Nair, S.K.
登録日2017-06-21
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis for the substrate specificity of quorum signal synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5W8C
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BU of 5w8c by Molmil
The structure of a COA-dependent acyl-homoserine lactone synthase, BjaI, with MTA and isovaleryl-CoA
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Autoinducer synthase, CHLORIDE ION, ...
著者Dong, S.-H, Nair, S.K.
登録日2017-06-21
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular basis for the substrate specificity of quorum signal synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5W8D
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BU of 5w8d by Molmil
The structure of a COA-dependent acyl-homoserine lactone synthase, BjaI, with MTA
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Autoinducer synthase, GLYCEROL
著者Dong, S.-H, Nair, S.K.
登録日2017-06-21
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for the substrate specificity of quorum signal synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5W8G
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BU of 5w8g by Molmil
The structure of a COA-dependent acyl-homoserine lactone synthase, BjaI, with SAH
分子名称: Autoinducer synthase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
著者Dong, S.-H, Nair, S.K.
登録日2017-06-21
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for the substrate specificity of quorum signal synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7CCF
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BU of 7ccf by Molmil
Mechanism insights on steroselective oxidation of phosphorylated ethylphenols with cytochrome P450 CreJ
分子名称: (3-ethylphenyl) dihydrogen phosphate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Dong, S, Du, L, Li, S.Y, Feng, Y.G.
登録日2020-06-17
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for Selective Oxidation of Phosphorylated Ethylphenols by Cytochrome P450 Monooxygenase CreJ.
Appl.Environ.Microbiol., 87, 2021
5GWE
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BU of 5gwe by Molmil
cytochrome P450 CREJ
分子名称: (4-methylphenyl) dihydrogen phosphate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Dong, S, liu, X, Wang, X, Feng, Y.
登録日2016-09-11
公開日2017-07-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Selective oxidation of aliphatic C-H bonds in alkylphenols by a chemomimetic biocatalytic system
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4Q8K
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BU of 4q8k by Molmil
Crystal structure of polysaccharide lyase family 18 aly-SJ02 P-CATD
分子名称: Alginase, CALCIUM ION, SULFATE ION
著者Dong, S, Li, C.Y, Zhang, Y.Z.
登録日2014-04-28
公開日2014-09-17
最終更新日2015-11-25
実験手法X-RAY DIFFRACTION (1.646 Å)
主引用文献Molecular insight into the role of the N-terminal extension in the maturation, substrate recognition, and catalysis of a bacterial alginate lyase from polysaccharide lyase family 18.
J.Biol.Chem., 289, 2014
4Q8L
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Crystal structure of polysacchride lyase family 18 aly-SJ02 r-CATD
分子名称: Alginase, CALCIUM ION
著者Dong, S, Li, C.Y, Zhang, Y.Z.
登録日2014-04-28
公開日2014-09-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Molecular insight into the role of the N-terminal extension in the maturation, substrate recognition, and catalysis of a bacterial alginate lyase from polysaccharide lyase family 18.
J.Biol.Chem., 289, 2014
5DZT
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BU of 5dzt by Molmil
Crystal structure of class II lanthipeptide synthetase CylM in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, CylM, ZINC ION
著者Dong, S.H, Lukk, T, Nair, S.K.
登録日2015-09-26
公開日2015-10-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The enterococcal cytolysin synthetase has an unanticipated lipid kinase fold.
Elife, 4, 2015
7XIV
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BU of 7xiv by Molmil
Structural insight into the interactions between Lloviu virus VP30 and nucleoprotein
分子名称: Nucleocapsid protein,Minor nucleoprotein VP30
著者Dong, S.S, Qin, X.C, Sun, W.Y, Luan, F.C, Wang, J.J, Ma, L, Li, X.X, Yang, G.X, Hao, C.Y.
登録日2022-04-14
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.498 Å)
主引用文献Structural insights into the interactions between lloviu virus VP30 and nucleoprotein.
Biochem.Biophys.Res.Commun., 616, 2022
5XJN
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BU of 5xjn by Molmil
cytochrome P450 CREJ in complex with (4-ethylphenyl) dihydrogen phosphate
分子名称: (4-ethylphenyl) dihydrogen phosphate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Dong, S, Du, L, Li, S, Feng, Y.
登録日2017-05-03
公開日2017-07-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Selective oxidation of aliphatic C-H bonds in alkylphenols by a chemomimetic biocatalytic system
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5H4R
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BU of 5h4r by Molmil
the complex of Glycoside Hydrolase 5 Lichenase from Caldicellulosiruptor sp. F32 E188Q mutant and cellotetraose
分子名称: Beta-1,3-1,4-glucanase, GLYCEROL, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Dong, S, Zhou, H, Liu, X, Wang, X, Feng, Y.
登録日2016-11-02
公開日2017-09-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.70310438 Å)
主引用文献Structural insights into the substrate specificity of a glycoside hydrolase family 5 lichenase from Caldicellulosiruptor sp. F32
Biochem. J., 474, 2017
5ZMY
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BU of 5zmy by Molmil
Crystal structure of a cis-epoxysuccinate hydrolase producing D(-)-tartaric acids
分子名称: Cis-epoxysuccinate hydrolase, D(-)-TARTARIC ACID, ZINC ION
著者Dong, S, Liu, X, Wang, X, Feng, Y.
登録日2018-04-06
公開日2018-08-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural insight into the catalytic mechanism of a cis-epoxysuccinate hydrolase producing enantiomerically pure d(-)-tartaric acid.
Chem. Commun. (Camb.), 54, 2018
5YJ7
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BU of 5yj7 by Molmil
Structural insight into the beta-GH1 glucosidase BGLN1 from oleaginous microalgae Nannochloropsis
分子名称: CALCIUM ION, GLYCEROL, Glycoside hydrolase
著者Dong, S, Liu, Y.J, Zhou, H.X, Xiao, Y, Xu, J, Cui, Q, Wang, X.Q, Feng, Y.G.
登録日2017-10-09
公開日2018-10-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural insight into a GH1 beta-glucosidase from the oleaginous microalga, Nannochloropsis oceanica.
Int.J.Biol.Macromol., 170, 2021
5ZMU
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BU of 5zmu by Molmil
Crystal structure of a cis-epoxysuccinate hydrolase producing D(-)-tartaric acids
分子名称: Cis-epoxysuccinate hydrolase, ZINC ION
著者Dong, S, Liu, X, Wang, X, Feng, Y.
登録日2018-04-06
公開日2018-08-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insight into the catalytic mechanism of a cis-epoxysuccinate hydrolase producing enantiomerically pure d(-)-tartaric acid.
Chem. Commun. (Camb.), 54, 2018
7CG5
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BU of 7cg5 by Molmil
Structure of the sensor domain (long construct) of the anti-sigma factor RsgI4 in Pseudobacteroides cellulosolvens
分子名称: Anti-sigma factor RsgI, N-terminal
著者Dong, S, Feng, Y.
登録日2020-06-30
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure of the sensor domain of the anti-sigma factor RsgI4 in Pseudobacteroides cellulosolvens
To Be Published
7CG8
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BU of 7cg8 by Molmil
Structure of the sensor domain (short construct) of the anti-sigma factor RsgI4 in Pseudobacteroides cellulosolvens
分子名称: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, ACETATE ION, Anti-sigma factor RsgI, ...
著者Dong, S, Feng, Y.
登録日2020-06-30
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the sensor domain of the anti-sigma factor RsgI4 in Pseudobacteroides cellulosolvens
To Be Published
7DMK
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BU of 7dmk by Molmil
PL6 alginate lyase BcAlyPL6
分子名称: BcAlyPL6, CALCIUM ION, MALONATE ION
著者Dong, S, Wang, B, Ma, X.Q, Li, F.L, Feng, Y.G.
登録日2020-12-04
公開日2021-10-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.213 Å)
主引用文献Structural basis for the exolytic activity of polysaccharide lyase family 6 alginate lyase BcAlyPL6 from human gut microbe Bacteroides clarus.
Biochem.Biophys.Res.Commun., 547, 2021
7CG1
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BU of 7cg1 by Molmil
Solution structure of the sensor domain of the anti-sigma factor RsgI4 in Pseudobacteroides cellulosolvens
分子名称: Anti-sigma factor RsgI, N-terminal
著者Dong, S, Feng, Y.
登録日2020-06-30
公開日2021-06-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the sensor domain of the anti-sigma factor RsgI4 in Pseudobacteroides cellulosolvens
To Be Published
8IVY
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BU of 8ivy by Molmil
Beta-Glucosidase BglA mutant E166Q in complex with glucose
分子名称: Beta-glucosidase, GLYCEROL, beta-D-glucopyranose
著者Dong, S, Xiao, Y, Feng, Y.
登録日2023-03-29
公開日2023-08-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Key roles of beta-glucosidase BglA for the catabolism of both laminaribiose and cellobiose in the lignocellulolytic bacterium Clostridium thermocellum.
Int.J.Biol.Macromol., 250, 2023
7X0L
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BU of 7x0l by Molmil
Crystal structure of sugar binding protein CbpB complexed wtih cellotetraose from Clostridium thermocellum
分子名称: CbpB, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Dong, S, Yao, X, Feng, Y.
登録日2022-02-22
公開日2022-09-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Deciphering Cellodextrin and Glucose Uptake in Clostridium thermocellum.
Mbio, 13, 2022
7X0H
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BU of 7x0h by Molmil
Crystal structure of sugar binding protein CbpA complexed wtih glucose from Clostridium thermocellum
分子名称: CbpA, beta-D-glucopyranose
著者Dong, S, Yao, X, Feng, Y.
登録日2022-02-22
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Deciphering Cellodextrin and Glucose Uptake in Clostridium thermocellum.
Mbio, 13, 2022
7X0P
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BU of 7x0p by Molmil
Crystal structure of sugar binding protein CbpD from Clostridium thermocellum
分子名称: CbpD
著者Dong, S, Yao, X, Feng, Y.
登録日2022-02-22
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Deciphering Cellodextrin and Glucose Uptake in Clostridium thermocellum.
Mbio, 13, 2022

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件を2024-07-10に公開中

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