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PDB: 163 results

6DL8
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BU of 6dl8 by Molmil
Crystal Structure of an influenza A hemagglutinin antibody Fab variant CH67:1203d4 chimera
Descriptor: CH67:1203d4 FAB light chain, Ch67:1203d4 FAB heavy chain
Authors:Dong, J, Finn, J.A, Crowe, J.E.
Deposit date:2018-05-31
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.805 Å)
Cite:Identification of Structurally Related Antibodies in Antibody Sequence Databases Using Rosetta-Derived Position-Specific Scoring.
Structure, 28, 2020
4TWO
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BU of 4two by Molmil
Human EphA3 Kinase domain in complex with compound 164
Descriptor: 5-{[3-carbamoyl-4-(3,4-dimethylphenyl)-5-methylthiophen-2-yl]amino}-5-oxopentanoic acid, Ephrin type-A receptor 3
Authors:Dong, J, Caflisch, A.
Deposit date:2014-07-01
Release date:2015-05-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:Structural Analysis of the Binding of Type I, I1/2, and II Inhibitors to Eph Tyrosine Kinases.
Acs Med.Chem.Lett., 6, 2015
4TWN
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BU of 4twn by Molmil
Human EphA3 Kinase domain in complex with Birb796
Descriptor: 1-(5-TERT-BUTYL-2-P-TOLYL-2H-PYRAZOL-3-YL)-3-[4-(2-MORPHOLIN-4-YL-ETHOXY)-NAPHTHALEN-1-YL]-UREA, Ephrin type-A receptor 3
Authors:Dong, J, Caflisch, A.
Deposit date:2014-07-01
Release date:2015-05-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.706 Å)
Cite:Structural Analysis of the Binding of Type I, I1/2, and II Inhibitors to Eph Tyrosine Kinases.
Acs Med.Chem.Lett., 6, 2015
8GQT
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BU of 8gqt by Molmil
Structure of Mpro complexed with Quercetin
Descriptor: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, 3C-like proteinase nsp5
Authors:Dong, J, Yang, G.-F.
Deposit date:2022-08-30
Release date:2023-08-30
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structure of Mpro complexed with Quercetin
To Be Published
6E9I
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BU of 6e9i by Molmil
The crystal structure of bovine ultralong antibody BOV-4
Descriptor: Bovine ultralong antibody BOV-4 heavy chain, Bovine ultralong antibody BOV-4 light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2018-08-01
Release date:2019-05-01
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Diversity of Ultralong CDRH3s in Seven Bovine Antibody Heavy Chains.
Front Immunol, 10, 2019
6E9G
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BU of 6e9g by Molmil
The crystal structure of bovine ultralong antibody BOV-2
Descriptor: Bovine ultralong antibody BOV-2 heavy chain, Bovine ultralong antibody BOV-2 light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2018-08-01
Release date:2019-05-01
Method:X-RAY DIFFRACTION (2.904 Å)
Cite:Structural Diversity of Ultralong CDRH3s in Seven Bovine Antibody Heavy Chains.
Front Immunol, 10, 2019
6E8V
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BU of 6e8v by Molmil
The crystal structure of bovine ultralong antibody BOV-1
Descriptor: Bovine ultralong antibody BOV-1 Heavy chain, Bovine ultralong antibody BOV-1 light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2018-07-31
Release date:2019-09-04
Last modified:2020-10-21
Method:X-RAY DIFFRACTION (3.79 Å)
Cite:Structural Diversity of Ultralong CDRH3s in Seven Bovine Antibody Heavy Chains.
Front Immunol, 10, 2019
6E9H
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BU of 6e9h by Molmil
The crystal structure of bovine ultralong antibody BOV-3
Descriptor: Bovine ultralong antibody BOV-3 heavy chain, Bovine ultralong antibody BOV-3 light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2018-08-01
Release date:2019-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Diversity of Ultralong CDRH3s in Seven Bovine Antibody Heavy Chains.
Front Immunol, 10, 2019
6E9U
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BU of 6e9u by Molmil
The crystal structure of bovine ultralong antibody BOV-7
Descriptor: Bovine ultralong antibody BOV-7 heavy chain, Bovine ultralong antibody BOV-7 light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2018-08-01
Release date:2019-05-01
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:Structural Diversity of Ultralong CDRH3s in Seven Bovine Antibody Heavy Chains.
Front Immunol, 10, 2019
6E9K
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BU of 6e9k by Molmil
The crystal structure of bovine ultralong antibody BOV-5
Descriptor: Bovine ultralong antibody BOV-5 heavy chain, IGL@ protein
Authors:Dong, J, Crowe, J.E.
Deposit date:2018-08-01
Release date:2019-05-01
Method:X-RAY DIFFRACTION (2.193 Å)
Cite:Structural Diversity of Ultralong CDRH3s in Seven Bovine Antibody Heavy Chains.
Front Immunol, 10, 2019
6E9Q
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BU of 6e9q by Molmil
The crystal structure of bovine ultralong antibody BOV-6
Descriptor: Bovine ultralong antibody BOV-6 heavy chain, Bovine ultralong antibody BOV-6 light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2018-08-01
Release date:2019-05-01
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Diversity of Ultralong CDRH3s in Seven Bovine Antibody Heavy Chains.
Front Immunol, 10, 2019
1BWI
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BU of 1bwi by Molmil
THE 1.8 A STRUCTURE OF MICROBATCH OIL DROP GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
Descriptor: PROTEIN (LYSOZYME)
Authors:Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C.
Deposit date:1998-09-24
Release date:1998-09-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1BWH
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BU of 1bwh by Molmil
THE 1.8 A STRUCTURE OF GROUND CONTROL GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
Descriptor: PROTEIN (LYSOZYME)
Authors:Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C.
Deposit date:1998-09-24
Release date:1998-09-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1BVX
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BU of 1bvx by Molmil
THE 1.8 A STRUCTURE OF GEL GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
Descriptor: PROTEIN (LYSOZYME)
Authors:Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C, Helliwell, J.R.
Deposit date:1998-09-18
Release date:1998-09-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1BWJ
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BU of 1bwj by Molmil
THE 1.8 A STRUCTURE OF MICROGRAVITY GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
Descriptor: PROTEIN (LYSOZYME)
Authors:Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C.
Deposit date:1998-09-18
Release date:1998-09-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
3QSQ
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BU of 3qsq by Molmil
Crystal structure of the projection domain of the human astrovirus capsid protein
Descriptor: Capsid polyprotein
Authors:Dong, J, Dong, L, Mendez, E, Tao, Y.J.
Deposit date:2011-02-21
Release date:2011-07-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the human astrovirus capsid spike.
Proc.Natl.Acad.Sci.USA, 108, 2011
6AGG
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BU of 6agg by Molmil
Crystal structure of agmatine-AMPPCP-Mg complexed TiaS (tRNAIle2 agmatidine synthetase)
Descriptor: ACETATE ION, AGMATINE, AMMONIUM ION, ...
Authors:Dong, J.S, Gong, W.M.
Deposit date:2018-08-11
Release date:2018-09-05
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (2.706 Å)
Cite:Structure of tRNA-Modifying Enzyme TiaS and Motions of Its Substrate Binding Zinc Ribbon.
J. Mol. Biol., 430, 2018
4GES
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BU of 4ges by Molmil
crystal structure of GFP-TYR151PYZ with an unnatural amino acid incorporation
Descriptor: Green fluorescent protein
Authors:Dong, J, Liu, X, Li, J, Wang, J, Gong, W.
Deposit date:2012-08-02
Release date:2012-08-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Genetic incorporation of a metal-chelating amino Acid as a probe for protein electron transfer.
Angew.Chem.Int.Ed.Engl., 51, 2012
4GF6
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BU of 4gf6 by Molmil
crystal structure of GFP with cuprum bound at the Incorporated metal Chelating Amino Acid PYZ151
Descriptor: CALCIUM ION, COPPER (II) ION, green fluorescent protein
Authors:Dong, J, Liu, X, Li, J, Wang, J, Gong, W.
Deposit date:2012-08-03
Release date:2012-08-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Genetic incorporation of a metal-chelating amino Acid as a probe for protein electron transfer.
Angew.Chem.Int.Ed.Engl., 51, 2012
7L7E
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BU of 7l7e by Molmil
Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibodies AZD8895 and AZD1061
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATE ION, Spike protein S1, ...
Authors:Dong, J, Crowe, J.E.
Deposit date:2020-12-28
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Genetic and structural basis for SARS-CoV-2 variant neutralization by a two-antibody cocktail.
Nat Microbiol, 6, 2021
7L7D
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BU of 7l7d by Molmil
Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibody AZD8895
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Spike protein S1, ...
Authors:Dong, J, Crowe, J.E.
Deposit date:2020-12-28
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Genetic and structural basis for SARS-CoV-2 variant neutralization by a two-antibody cocktail.
Nat Microbiol, 6, 2021
6P9J
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BU of 6p9j by Molmil
crystal structure of human anti staphylococcus aureus antibody STAU-229 Fab
Descriptor: TRIS(HYDROXYETHYL)AMINOMETHANE, human anti staphylococcus aureus antibody STAU-229 Fab heavy chain, human anti staphylococcus aureus antibody STAU-229 Fab light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-06-10
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
6P9I
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BU of 6p9i by Molmil
crystal structure of human anti staphylococcus aureus antibody STAU-399 Fab
Descriptor: human anti staphylococcus aureus antibody STAU-399 Fab heavy chain, human anti staphylococcus aureus antibody STAU-399 Fab light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-06-10
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
6P9H
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BU of 6p9h by Molmil
Crystal structure of human anti staphylococcus aureus antibody STAU-281 Fab in complex with IsdB NEAT2 domain
Descriptor: Human anti staphylococcus aureus antibody STAU-281 Fab heavy chain, Human anti staphylococcus aureus antibody STAU-281 Fab light chain, Iron-regulated heme-iron binding protein
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-06-10
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
4G2F
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BU of 4g2f by Molmil
Human EphA3 kinase domain in complex with compound 7
Descriptor: 1-amino-5-(5-hydroxy-2-methylphenyl)-7,8,9,10-tetrahydropyrimido[4,5-c]isoquinolin-6(5H)-one, EPH receptor A3
Authors:Dong, J, Caflisch, A.
Deposit date:2012-07-12
Release date:2012-10-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Discovery of a novel chemotype of tyrosine kinase inhibitors by fragment-based docking and molecular dynamics.
ACS MED.CHEM.LETT., 3, 2012

224572

數據於2024-09-04公開中

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