Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 113 results

3NN2
DownloadVisualize
BU of 3nn2 by Molmil
Structure of chlorite dismutase from Candidatus Nitrospira defluvii in complex with cyanide
Descriptor: CYANIDE ION, Chlorite dismutase, GLYCEROL, ...
Authors:Kostan, J, Sjoeblom, B, Maixner, F, Mlynek, G, Furtmueller, P.G, Obinger, C, Wagner, M, Daims, H, Djinovic-Carugo, K.
Deposit date:2010-06-23
Release date:2010-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural and functional characterisation of the chlorite dismutase from the nitrite-oxidizing bacterium "Candidatus Nitrospira defluvii": Identification of a catalytically important amino acid residue
J.Struct.Biol., 172, 2010
4D1E
DownloadVisualize
BU of 4d1e by Molmil
THE CRYSTAL STRUCTURE OF HUMAN MUSCLE ALPHA-ACTININ-2
Descriptor: ALPHA-ACTININ-2
Authors:Pinotsis, N, Salmazo, A, Sjoeblom, B, Gkougkoulia, E, Djinovic-Carugo, K.
Deposit date:2014-05-01
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The Structure and Regulation of Human Muscle Alpha-Actinin
Cell(Cambridge,Mass.), 159, 2014
5K33
DownloadVisualize
BU of 5k33 by Molmil
Crystal structure of extracellular domain of HER2 in complex with Fcab STAB19
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ig gamma-1 chain C region, ...
Authors:Humm, A, Lobner, E, Goritzer, K, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-05-19
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Fcab-HER2 Interaction: a Menage a Trois. Lessons from X-Ray and Solution Studies.
Structure, 25, 2017
5K64
DownloadVisualize
BU of 5k64 by Molmil
Crystal structure of VEGF binding IgG1-Fc (Fcab 448)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Humm, A, Lobner, E, Kitzmuller, M, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-05-24
Release date:2017-09-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Two-faced Fcab prevents polymerization with VEGF and reveals thermodynamics and the 2.15 angstrom crystal structure of the complex.
MAbs, 9, 2017
5JXP
DownloadVisualize
BU of 5jxp by Molmil
Crystal structure of Porphyromonas endodontalis DPP11 in alternate conformation
Descriptor: Asp/Glu-specific dipeptidyl-peptidase, CALCIUM ION, CHLORIDE ION
Authors:Bezerra, G.A, Cornaciu, I, Hoffmann, G, Djinovic-Carugo, K, Marquez, J.A.
Deposit date:2016-05-13
Release date:2017-06-14
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Bacterial protease uses distinct thermodynamic signatures for substrate recognition.
Sci Rep, 7, 2017
5K91
DownloadVisualize
BU of 5k91 by Molmil
Crystal structure of dimeric chlorite dismutase from Cyanothece sp. PCC7425 in complex with fluoride
Descriptor: Chlorite dismutase, FLUORIDE ION, GLYCEROL, ...
Authors:Puehringer, D, Schaffner, I, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-05-31
Release date:2017-06-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies.
ACS Catal, 7, 2017
5JWI
DownloadVisualize
BU of 5jwi by Molmil
Crystal structure of Porphyromonas endodontalis DPP11 in complex with dipeptide Arg-Glu
Descriptor: ARGININE, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION, ...
Authors:Bezerra, G.A, Fedosyuk, S, Ohara-Nemoto, Y, Nemoto, T.K, Djinovic-Carugo, K.
Deposit date:2016-05-12
Release date:2017-06-14
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bacterial protease uses distinct thermodynamic signatures for substrate recognition.
Sci Rep, 7, 2017
5K90
DownloadVisualize
BU of 5k90 by Molmil
Crystal structure of dimeric chlorite dismutase from Cyanothece sp. PCC7425 in complex with isothiocyanate
Descriptor: Chlorite dismutase, GLYCEROL, MAGNESIUM ION, ...
Authors:Puehringer, D, Schaffner, I, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-05-31
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies.
ACS Catal, 7, 2017
6ERC
DownloadVisualize
BU of 6erc by Molmil
Peroxidase A from Dictyostelium discoideum (DdPoxA)
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nicolussi, A, Mlynek, G, Furtmueller, P.G, Djinovic-Carugo, K, Obinger, C.
Deposit date:2017-10-17
Release date:2017-12-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.50001836 Å)
Cite:Secreted heme peroxidase from Dictyostelium discoideum: Insights into catalysis, structure, and biological role.
J. Biol. Chem., 293, 2018
2N8Y
DownloadVisualize
BU of 2n8y by Molmil
Holo form of Calmodulin-Like Domain of Human Non-Muscle alpha-actinin 1
Descriptor: Alpha-actinin-1, CALCIUM ION
Authors:Drmota Prebil, S, Slapsak, U, de Almeida Ribeiro, E, Pavsic, M, Ilc, G, Zielinska, K, Hartl, M, Backman, L, Plavec, J, Lenarcic, B, Djinovic-Carugo, K.
Deposit date:2015-10-28
Release date:2016-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and calcium-binding studies of calmodulin-like domain of human non-muscle alpha-actinin-1.
Sci Rep, 6, 2016
2N8Z
DownloadVisualize
BU of 2n8z by Molmil
Apo form of Calmodulin-Like Domain of Human Non-Muscle alpha-actinin 1
Descriptor: Alpha-actinin-1
Authors:Drmota Prebil, S, Slapsak, U, de Almeida Ribeiro, E, Pavsic, M, Ilc, G, Zielinska, K, Hartl, M, Backman, L, Plavec, J, Lenarcic, B, Djinovic-Carugo, K.
Deposit date:2015-10-28
Release date:2016-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and calcium-binding studies of calmodulin-like domain of human non-muscle alpha-actinin-1.
Sci Rep, 6, 2016
5MAV
DownloadVisualize
BU of 5mav by Molmil
Crystal structure of human PCNA in complex with PARG (poly(ADP-ribose) glycohydrolase) peptide.
Descriptor: Poly (ADP-ribose) glycohydrolase, Proliferating cell nuclear antigen
Authors:Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
Deposit date:2016-11-06
Release date:2017-08-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.575 Å)
Cite:A novel non-canonical PIP-box mediates PARG interaction with PCNA.
Nucleic Acids Res., 45, 2017
4WWS
DownloadVisualize
BU of 4wws by Molmil
Structure of Chlorite dismutase-like Protein from Listeria monocytogenes
Descriptor: POTASSIUM ION, Putative heme-dependent peroxidase lmo2113
Authors:Hagmueller, A, Mlynek, G, Djinovic-Carugo, K.
Deposit date:2014-11-12
Release date:2015-02-04
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and heme-binding properties of HemQ (chlorite dismutase-like protein) from Listeria monocytogenes.
Arch.Biochem.Biophys., 574, 2015
5KWG
DownloadVisualize
BU of 5kwg by Molmil
Crystal structure of extracellular domain of HER2 in complex with Fcab H10-03-6
Descriptor: Ig gamma-1 chain C region, Receptor tyrosine-protein kinase erbB-2
Authors:Humm, A, Lobner, E, Goritzer, K, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-07-18
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4.3 Å)
Cite:Fcab-HER2 Interaction: a Menage a Trois. Lessons from X-Ray and Solution Studies.
Structure, 25, 2017
4XQ3
DownloadVisualize
BU of 4xq3 by Molmil
Crystal structure of Sso-SmAP2
Descriptor: Like-Sm ribonucleoprotein core
Authors:Bezerra, G.A, Martens, B, Kreuter, M.J, Grishkovskaya, I, Manica, M, Arkhipova, V, Blasi, U, Djinovic-Carugo, K.
Deposit date:2015-01-18
Release date:2015-04-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Heptameric SmAP1 and SmAP2 Proteins of the Crenarchaeon Sulfolobus Solfataricus Bind to Common and Distinct RNA Targets.
Life, 5, 2015
4YDP
DownloadVisualize
BU of 4ydp by Molmil
Crystal structure of N-terminal PDZ domain of ZASP in complex with myotilin C-terminal peptide.
Descriptor: GLUTAMIC ACID, LEUCINE, LIM domain-binding protein 3
Authors:Grishkovskaya, I, Onipe, A, Kontaxis, G, Djinovic-Carugo, K.
Deposit date:2015-02-22
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of N-terminal PDZ domain of ZASP in complex with myotilin C-terminal peptide.
To Be Published
3RKG
DownloadVisualize
BU of 3rkg by Molmil
Structural and Functional Characterization of the Yeast Mg2+ Channel Mrs2
Descriptor: 1,2-ETHANEDIOL, Magnesium transporter MRS2, mitochondrial
Authors:Khan, M.B, Sponder, G, Sjoeblom, B, Svidova, S, Schweyen, R.J, Carugo, O, Djinovic-Carugo, K.
Deposit date:2011-04-18
Release date:2012-04-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Structural and functional characterization of the N-terminal domain of the yeast Mg(2+) channel Mrs2.
Acta Crystallogr.,Sect.D, 69, 2013
7A8U
DownloadVisualize
BU of 7a8u by Molmil
Crystal structure of sarcomeric protein FATZ-1 (d91-FATZ-1 construct) in complex with rod domain of alpha-actinin-2
Descriptor: Alpha-actinin-2, Myozenin-1
Authors:Sponga, A, Arolas, J.L, Rodriguez Chamorro, A, Mlynek, G, Hollerl, E, Schreiner, C, Pedron, M, Kostan, J, Ribeiro, E.A, Djinovic-Carugo, K.
Deposit date:2020-08-31
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.802 Å)
Cite:Order from disorder in the sarcomere: FATZ forms a fuzzy but tight complex and phase-separated condensates with alpha-actinin.
Sci Adv, 7, 2021
7A8T
DownloadVisualize
BU of 7a8t by Molmil
Crystal structure of sarcomeric protein FATZ-1 (mini-FATZ-1 construct) in complex with rod domain of alpha-actinin-2
Descriptor: Alpha-actinin-2, Myozenin-1
Authors:Sponga, A, Arolas, J.L, Rodriguez Chamorro, A, Mlynek, G, Hollerl, E, Schreiner, C, Pedron, M, Kostan, J, Ribeiro, E.A, Djinovic-Carugo, K.
Deposit date:2020-08-31
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Order from disorder in the sarcomere: FATZ forms a fuzzy but tight complex and phase-separated condensates with alpha-actinin.
Sci Adv, 7, 2021
7ATI
DownloadVisualize
BU of 7ati by Molmil
Crystal structure of dimeric chlorite dismutase variant Q74V (CCld Q74V) from Cyanothece sp. PCC7425
Descriptor: Chlorite dismutase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Schmidt, D, Mlynek, G, Djinovic-Carugo, K, Obinger, C.
Deposit date:2020-10-30
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Arresting the Catalytic Arginine in Chlorite Dismutases: Impact on Heme Coordination, Thermal Stability, and Catalysis.
Biochemistry, 60, 2021
7ASB
DownloadVisualize
BU of 7asb by Molmil
Crystal structure of dimeric chlorite dismutase variant Q74E (CCld Q74E) from Cyanothece sp. PCC7425
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Chlorite dismutase, DI(HYDROXYETHYL)ETHER, ...
Authors:Schmidt, D, Mlynek, G, Djinovic-Carugo, K, Obinger, C.
Deposit date:2020-10-27
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Arresting the Catalytic Arginine in Chlorite Dismutases: Impact on Heme Coordination, Thermal Stability, and Catalysis.
Biochemistry, 60, 2021
1UO6
DownloadVisualize
BU of 1uo6 by Molmil
PORCINE PANCREATIC ELASTASE/Xe-COMPLEX
Descriptor: CHLORIDE ION, ELASTASE 1, GLYCEROL, ...
Authors:Mueller-Dieckmann, C, Polentarutti, M, Djinovic-Carugo, K, Panjikar, S, Tucker, P.A, Weiss, M.S.
Deposit date:2003-09-16
Release date:2003-10-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:On the Routine Use of Soft X-Rays in Macromolecular Crystallography. Part II. Data-Collection Wavelength and Scaling Models
Acta Crystallogr.,Sect.D, 60, 2004
3QO3
DownloadVisualize
BU of 3qo3 by Molmil
Crystal structure of Escherichia coli Hfq, in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Protein hfq
Authors:Beich-Frandsen, M, Vecerek, B, Hammele, H, Kloiber, K, Sjoeblom, B, Blasi, U, Djinovic-Carugo, K.
Deposit date:2011-02-09
Release date:2012-02-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and biochemical studies on ATP binding and hydrolysis by the Escherichia coli RNA chaperone Hfq
Plos One, 7, 2012
4MZV
DownloadVisualize
BU of 4mzv by Molmil
Crystal structure of extracellular part of human EpCAM
Descriptor: DECYL-BETA-D-MALTOPYRANOSIDE, Epithelial cell adhesion molecule
Authors:Pavsic, M, Guncar, G, Djinovic-Carugo, K, Lenarcic, B.
Deposit date:2013-09-30
Release date:2014-08-27
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.865 Å)
Cite:Crystal structure and its bearing towards an understanding of key biological functions of EpCAM.
Nat Commun, 5, 2014
4Q57
DownloadVisualize
BU of 4q57 by Molmil
Crystal structure of the plectin 1a actin-binding domain/N-terminal domain of calmodulin complex
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Song, J.-G, Kostan, J, Grishkovskaya, I, Djinovic-Carugo, K.
Deposit date:2014-04-16
Release date:2014-07-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the plectin 1a actin-binding domain/N-terminal domain of calmodulin complex
To be Published

222926

數據於2024-07-24公開中

PDB statisticsPDBj update infoContact PDBjnumon