Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 346 件

2WEB
DownloadVisualize
BU of 2web by Molmil
ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE INHIBITOR: METHYL(2S)-[1-(((N-FORMYL)-L-VALYL)AMINO-2-(2-NAPHTHYL)ETHYL)HYDROXYPHOSPHINYLOXY]-3-PHENYLPROPANOATE, SODIUM SALT
分子名称: METHYL (2S)-[1-((N-FORMYL)-L-VALYL)AMINO-2-(2-NAPHTHYL)ETHYL)HYDROXYPHOSPHINYLOXY]-3-PHENYL PROPANOATE, PENICILLOPEPSIN, SULFATE ION, ...
著者Ding, J, Fraser, M.E, James, M.N.G.
登録日1998-02-03
公開日1998-05-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
3WBM
DownloadVisualize
BU of 3wbm by Molmil
Crystal Structure of protein-RNA complex
分子名称: DNA/RNA-binding protein Alba 1, RNA (25-MER)
著者Ding, J, Wang, D.C.
登録日2013-05-20
公開日2013-12-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Biochemical and structural insights into RNA binding by Ssh10b, a member of the highly conserved Sac10b protein family in Archaea.
J.Biol.Chem., 289, 2014
2WEA
DownloadVisualize
BU of 2wea by Molmil
ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE INHIBITOR: METHYL[CYCLO-7[(2R)-((N-VALYL) AMINO)-2-(HYDROXYL-(1S)-1-METHYOXYCARBONYL-2-PHENYLETHOXY) PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], SODIUM SALT
分子名称: METHYL[CYCLO-7[(2R)-((N-VALYL)AMINO)-2-(HYDROXYL-(1S)-1-METHYLOXYCARBONYL-2-PHENYLETHOXY)PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], PENICILLOPEPSIN, SULFATE ION, ...
著者Ding, J, Fraser, M.E, James, M.N.G.
登録日1998-02-03
公開日1998-05-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
2WED
DownloadVisualize
BU of 2wed by Molmil
ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE MACROCYCLIC INHIBITOR:METHYL[CYCLO-7[(2R)-((N-VALYL)AMINO)-2-(HYDROXYL-(1S)-1-METHYOXYCARBONYL-2-PHENYLETHOXY)PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], SODIUM SALT
分子名称: METHYL[CYCLO-7[(2R)-((N-VALYL)AMINO)-2-(HYDROXYL-(1S)-1-METHYLOXYCARBONYL-2-PHENYLETHOXY)PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], PENICILLOPEPSIN, SULFATE ION, ...
著者Ding, J, Fraser, M.E, James, M.N.G.
登録日1998-02-03
公開日1998-05-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
1HPZ
DownloadVisualize
BU of 1hpz by Molmil
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
分子名称: ALPHA-(2,6-DICHLOROPHENYL)-ALPHA-(2-ACETYL-5-METHYLANILINO)ACETAMIDE, POL POLYPROTEIN
著者Ding, J, Hsiou, Y, Arnold, E.
登録日2000-12-13
公開日2001-05-30
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The Lys103Asn mutation of HIV-1 RT: a novel mechanism of drug resistance.
J.Mol.Biol., 309, 2001
1HQE
DownloadVisualize
BU of 1hqe by Molmil
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
分子名称: POL POLYPROTEIN
著者Ding, J, Hsiou, Y, Arnold, E.
登録日2000-12-15
公開日2001-05-30
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Lys103Asn mutation of HIV-1 RT: a novel mechanism of drug resistance.
J.Mol.Biol., 309, 2001
3A0E
DownloadVisualize
BU of 3a0e by Molmil
Crystal Structure of Polygonatum cyrtonema lectin (PCL) complexed with dimannoside
分子名称: Mannose/sialic acid-binding lectin, SULFATE ION, alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose
著者Ding, J, Wang, D.C.
登録日2009-03-16
公開日2010-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
J.Struct.Biol., 171, 2010
3A0D
DownloadVisualize
BU of 3a0d by Molmil
Crystal Structure of Polygonatum cyrtonema lectin (PCL) complexed with monomannoside
分子名称: Mannose/sialic acid-binding lectin, SULFATE ION, methyl alpha-D-mannopyranoside
著者Ding, J, Wang, D.C.
登録日2009-03-16
公開日2010-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
J.Struct.Biol., 171, 2010
3A0C
DownloadVisualize
BU of 3a0c by Molmil
Crystal Structure of an anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua
分子名称: Mannose/sialic acid-binding lectin
著者Ding, J, Wang, D.C.
登録日2009-03-16
公開日2010-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
J.Struct.Biol., 171, 2010
1HJA
DownloadVisualize
BU of 1hja by Molmil
LYS 18 VARIANT OF TURKEY OVOMUCOID INHIBITOR THIRD DOMAIN COMPLEXED WITH ALPHA-CHYMOTRYPSIN
分子名称: ALPHA-CHYMOTRYPSIN, OVOMUCOID INHIBITOR
著者Ding, J.-H, James, M.N.G.
登録日1997-07-09
公開日1998-01-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Lys18 Variant of Turkey Ovomucoid Inhibitor Third Domain Complexed with Alpha-Chymotrypsin at 2.3 A
To be Published
4YKC
DownloadVisualize
BU of 4ykc by Molmil
Crystal structure of cerebral cavernous malformation 2 C-terminal adaptor domain
分子名称: Malcavernin
著者Ding, J, Wang, X, Wang, D.C.
登録日2015-03-04
公開日2015-06-03
最終更新日2015-06-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Insights into the Molecular Recognition between Cerebral Cavernous Malformation 2 and Mitogen-Activated Protein Kinase Kinase Kinase 3
Structure, 23, 2015
4YKD
DownloadVisualize
BU of 4ykd by Molmil
Crystal structure of truncated cerebral cavernous malformation 2 C-terminal adaptor domain
分子名称: Malcavernin
著者Ding, J, Wang, X, Wang, D.C.
登録日2015-03-04
公開日2015-06-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.932 Å)
主引用文献Structural Insights into the Molecular Recognition between Cerebral Cavernous Malformation 2 and Mitogen-Activated Protein Kinase Kinase Kinase 3
Structure, 23, 2015
4YL6
DownloadVisualize
BU of 4yl6 by Molmil
Crystal structure of truncated cerebral cavernous malformation 2 C-terminal adaptor domain in complex with an internal helix of mitogen-activated protein kinase kinase kinase 3
分子名称: Malcavernin, Mitogen-activated protein kinase kinase kinase 3
著者Ding, J, Wang, X, Wang, D.C.
登録日2015-03-05
公開日2015-06-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Insights into the Molecular Recognition between Cerebral Cavernous Malformation 2 and Mitogen-Activated Protein Kinase Kinase Kinase 3
Structure, 23, 2015
6ACI
DownloadVisualize
BU of 6aci by Molmil
Crystal structure of EPEC effector NleB in complex with FADD death domain
分子名称: FAS-associated death domain protein, MANGANESE (II) ION, T3SS secreted effector NleB homolog, ...
著者Ding, J, Shao, F.
登録日2018-07-26
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural and Functional Insights into Host Death Domains Inactivation by the Bacterial Arginine GlcNAcyltransferase Effector.
Mol.Cell, 74, 2019
6AC0
DownloadVisualize
BU of 6ac0 by Molmil
Crystal structure of TRADD death domain GlcNAcylated by EPEC effector NleB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor receptor type 1-associated DEATH domain protein
著者Ding, J, Shao, F.
登録日2018-07-24
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.449 Å)
主引用文献Structural and Functional Insights into Host Death Domains Inactivation by the Bacterial Arginine GlcNAcyltransferase Effector.
Mol.Cell, 74, 2019
6AC5
DownloadVisualize
BU of 6ac5 by Molmil
Crystal structure of RIPK1 death domain GlcNAcylated by EPEC effector NleB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor-interacting serine/threonine-protein kinase 1, SULFATE ION
著者Ding, J, Shao, F.
登録日2018-07-25
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.451 Å)
主引用文献Structural and Functional Insights into Host Death Domains Inactivation by the Bacterial Arginine GlcNAcyltransferase Effector.
Mol.Cell, 74, 2019
3WA5
DownloadVisualize
BU of 3wa5 by Molmil
Crystal Structure of type VI peptidoglycan muramidase effector Tse3 in complex with its cognate immunity protein Tsi3
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Tse3-specific immunity protein, ...
著者Ding, J, Wang, T, Liu, W, Wang, D.C.
登録日2013-04-26
公開日2013-10-02
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Complex structure of type VI peptidoglycan muramidase effector and a cognate immunity protein.
Acta Crystallogr.,Sect.D, 69, 2013
1K5M
DownloadVisualize
BU of 1k5m by Molmil
Crystal Structure of a Human Rhinovirus Type 14:Human Immunodeficiency Virus Type 1 V3 Loop Chimeric Virus MN-III-2
分子名称: CHIMERA OF HRV14 COAT PROTEIN VP2 (P1B) AND the V3 loop of HIV-1 gp120, COAT PROTEIN VP1 (P1D), COAT PROTEIN VP3 (P1C), ...
著者Ding, J, Smith, A.D, Geisler, S.C, Ma, X, Arnold, G.F, Arnold, E.
登録日2001-10-11
公開日2002-07-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of a Human Rhinovirus that Displays Part of the HIV-1 V3 Loop and Induces Neutralizing Antibodies against HIV-1
Structure, 10, 2002
5B5R
DownloadVisualize
BU of 5b5r by Molmil
Crystal structure of GSDMA3
分子名称: Gasdermin-A3
著者Ding, J, Shao, F.
登録日2016-05-14
公開日2016-06-15
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Pore-forming activity and structural autoinhibition of the gasdermin family.
Nature, 535, 2016
3WLC
DownloadVisualize
BU of 3wlc by Molmil
Crystal structure of dimeric GCaMP6m
分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
著者Ding, J, Luo, A.F, Hu, L.Y, Wang, D.C, Shao, F.
登録日2013-11-08
公開日2014-01-22
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structural basis of the ultrasensitive calcium indicator GCaMP6.
Sci China Life Sci, 57, 2014
3WLD
DownloadVisualize
BU of 3wld by Molmil
Crystal structure of monomeric GCaMP6m
分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
著者Ding, J, Luo, A.F, Hu, L.Y, Wang, D.C, Shao, F.
登録日2013-11-08
公開日2014-01-22
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of the ultrasensitive calcium indicator GCaMP6.
Sci China Life Sci, 57, 2014
5Z2C
DownloadVisualize
BU of 5z2c by Molmil
Crystal structure of ALPK-1 N-terminal domain in complex with ADP-heptose
分子名称: Alpha-protein kinase 1, [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4S,5S,6R)-6-[(1S)-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate
著者Ding, J, She, Y, Shao, F.
登録日2018-01-02
公開日2018-08-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.594 Å)
主引用文献Alpha-kinase 1 is a cytosolic innate immune receptor for bacterial ADP-heptose.
Nature, 561, 2018
3AJM
DownloadVisualize
BU of 3ajm by Molmil
Crystal structure of programmed cell death 10 in complex with inositol 1,3,4,5-tetrakisphosphate
分子名称: INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, Programmed cell death protein 10
著者Ding, J, Wang, D.C.
登録日2010-06-09
公開日2010-06-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of human programmed cell death 10 complexed with inositol-(1,3,4,5)-tetrakisphosphate: a novel adaptor protein involved in human cerebral cavernous malformation.
Biochem.Biophys.Res.Commun., 399, 2010
2UP1
DownloadVisualize
BU of 2up1 by Molmil
STRUCTURE OF UP1-TELOMERIC DNA COMPLEX
分子名称: DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1)
著者Ding, J, Hayashi, M.K, Krainer, A.R, Xu, R.-M.
登録日1998-07-10
公開日1999-11-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA.
Genes Dev., 13, 1999
7WZS
DownloadVisualize
BU of 7wzs by Molmil
Crystal structure of Chromobacterium violaceum effector CopC in complex with host calmodulin and caspase-7
分子名称: Calmodulin-1, Caspase-7, CopC
著者Ding, J.
登録日2022-02-19
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Calmodulin Binding Activates Chromobacterium CopC Effector to ADP-Riboxanate Host Apoptotic Caspases.
Mbio, 13, 2022

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon