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PDB: 158 results

4LPM
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BU of 4lpm by Molmil
Frog M-ferritin with magnesium, D127E mutant
Descriptor: CHLORIDE ION, Ferritin, middle subunit, ...
Authors:Torres, R, Behera, R, Goulding, C.W, Theil, E.C.
Deposit date:2013-07-16
Release date:2014-07-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:D127E ion channel exit modification in ferritin nanocages entraps Fe(II) and impairs its distribution to diiron catalytic centers
To be Published
4LPN
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BU of 4lpn by Molmil
Frog M-ferritin with cobalt, D127E mutant
Descriptor: CHLORIDE ION, COBALT (II) ION, Ferritin, ...
Authors:Torres, R, Behera, R, Goulding, C.W.
Deposit date:2013-07-16
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:D127E ion channel exit modification in ferritin nanocages entraps Fe(II) and impairs its distribution to diiron catalytic centers
To be Published
4HFZ
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BU of 4hfz by Molmil
Crystal Structure of an MDM2/P53 Peptide Complex
Descriptor: Cellular tumor antigen p53, E3 ubiquitin-protein ligase Mdm2, SULFATE ION
Authors:Anil, B, Riedinger, C, Endicott, J.A, Noble, M.E.M.
Deposit date:2012-10-05
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.694 Å)
Cite:The structure of an MDM2-Nutlin-3a complex solved by the use of a validated MDM2 surface-entropy reduction mutant.
Acta Crystallogr.,Sect.D, 69, 2013
4IVH
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BU of 4ivh by Molmil
Crystal structure of QKLVFFAED nonapeptide segment from amyloid beta incorporated into a macrocyclic beta-sheet template
Descriptor: SODIUM ION, TERTIARY-BUTYL ALCOHOL, cyclo[Gln-Lys-Leu-Val-Phe-Phe-Ala-Glu-Asp-(delta-linked-Orn)-Hao-Lys-Hao-(p-bromoPhe)-Thr-(delta-linked-Orn)]
Authors:Pham, J.D, Chim, N, Goulding, C.W, Nowick, J.S.
Deposit date:2013-01-22
Release date:2013-07-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structures of beta-Amyloid Peptide Oligomers
J.Am.Chem.Soc., 2013
4HG7
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BU of 4hg7 by Molmil
Crystal Structure of an MDM2/Nutlin-3a complex
Descriptor: 4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one, E3 ubiquitin-protein ligase Mdm2, SULFATE ION
Authors:Noble, M.E.M, Anil, B, Riedinger, C, Endicott, J.A.
Deposit date:2012-10-07
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure of an MDM2-Nutlin-3a complex solved by the use of a validated MDM2 surface-entropy reduction mutant.
Acta Crystallogr.,Sect.D, 69, 2013
3SIK
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BU of 3sik by Molmil
Crystal structure of the Bacillus anthracis hemophore IsdX1 complexed with heme
Descriptor: Conserved domain protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Owens, C.P, Goulding, C.W.
Deposit date:2011-06-19
Release date:2012-05-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.149 Å)
Cite:Differential function of lip residues in the mechanism and biology of an anthrax hemophore.
Plos Pathog., 8, 2012
3UNO
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BU of 3uno by Molmil
Mycobacterium tuberculosis ferritin homolog, BfrB
Descriptor: Probable bacterioferritin BfrB
Authors:McMath, L.M, Contreras, H, Goulding, C.W, TB Structural Genomics Consortium (TBSGC)
Deposit date:2011-11-16
Release date:2012-11-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Mycobacterium tuberculosis ferritin homolog, BfrB
To be Published
3S8D
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BU of 3s8d by Molmil
Crystal Structure of RipA from Yersinia pestis
Descriptor: Coenzyme A transferase
Authors:Torres, R, Goulding, C.W.
Deposit date:2011-05-27
Release date:2012-01-18
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Biochemical, structural and molecular dynamics analyses of the potential virulence factor RipA from Yersinia pestis.
Plos One, 6, 2011
4N8J
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BU of 4n8j by Molmil
F60M mutant, RipA structure
Descriptor: ACETATE ION, COENZYME A, PHOSPHATE ION, ...
Authors:Torres, R, Goulding, C.W.
Deposit date:2013-10-17
Release date:2014-04-09
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural snapshots along the reaction pathway of Yersinia pestis RipA, a putative butyryl-CoA transferase.
Acta Crystallogr.,Sect.D, 70, 2014
4NTQ
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BU of 4ntq by Molmil
CdiA-CT/CdiI toxin and immunity complex from Enterobacter cloacae
Descriptor: Contact-dependent inhibitor A, ECL CdiI
Authors:Morse, R.P, Goulding, C.W.
Deposit date:2013-12-02
Release date:2014-03-26
Last modified:2014-05-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:CdiA from Enterobacter cloacae Delivers a Toxic Ribosomal RNase into Target Bacteria.
Structure, 22, 2014
3UOI
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BU of 3uoi by Molmil
Mycobacterium tuberculosis bacterioferritin, BfrA
Descriptor: Bacterioferritin, PROTOPORPHYRIN IX CONTAINING FE
Authors:McMath, L.M, Goulding, C.W, TB Structural Genomics Consortium (TBSGC)
Deposit date:2011-11-16
Release date:2012-12-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mycobacterium tuberculosis bacterioferritin, BfrA
To be Published
3UOF
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BU of 3uof by Molmil
Mycobacterium tuberculosis bacterioferritin, BfrA
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bacterioferritin, FE (III) ION, ...
Authors:McMath, L.M, Goulding, C.W, TB Structural Genomics Consortium (TBSGC)
Deposit date:2011-11-16
Release date:2012-11-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Mycobacterium tuberculosis bacterioferritin, BfrA
To be Published
3HX9
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BU of 3hx9 by Molmil
Structure of heme-degrader, MhuD (Rv3592), from Mycobacterium tuberculosis with two hemes bound in its active site
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, Protein Rv3592
Authors:Chim, N, Nguyen, T.Q, Iniguez, A, Goulding, C.W.
Deposit date:2009-06-19
Release date:2009-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Unusual Diheme Conformation of the Heme-Degrading Protein from Mycobacterium tuberculosis
J.Mol.Biol., 395, 2009
4NL5
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BU of 4nl5 by Molmil
Mycobacterium tuberculosis heme-degrading protein MhuD in complex with heme and cyanide
Descriptor: ACETATE ION, CYANIDE ION, Heme-degrading monooxygenase HmoB, ...
Authors:Morse, R.P, Chao, A, Goulding, C.W.
Deposit date:2013-11-13
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic and Spectroscopic Insights into Heme Degradation by Mycobacterium tuberculosis MhuD.
Inorg.Chem., 53, 2014
2XFK
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BU of 2xfk by Molmil
Human BACE-1 in complex with N-((1S,2R)-3-(((1S)-2-(cyclohexylamino)- 1-methyl-2-oxoethyl)amino)-2-hydroxy-1-(phenylmethyl)propyl)-3-(ethylamino)-5-((methylsulfonyl)(phenyl)amino)benzamide
Descriptor: BETA-SECRETASE 1, N-((1S,2R)-3-(((1S)-2-(CYCLOHEXYLAMINO)-1--METHYL-2-OXOETHYL)AMINO)-2-HYDROXY-1-(PHENYLMETHYL)PROPYL)-3-(ETHYLAMINO)-5-((METHYLSULFONYL)(PHENYL)AMINO)BENZAMIDE
Authors:Clarke, B, Cutler, L, Demont, E, Dingwall, C, Dunsdon, R, Hawkins, J, Howes, C, Hussain, I, Maile, G, Matico, R, Mosley, J, Naylor, A, O'Brien, A, Redshaw, S, Rowland, P, Soleil, V, Smith, K.J, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Wayne, G.
Deposit date:2010-05-24
Release date:2010-07-07
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bace-1 Inhibitors Using Novel Edge-to-Face Interaction with Arg-296
Bioorg.Med.Chem.Lett., 20, 2010
2XFJ
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BU of 2xfj by Molmil
Human BACE-1 in complex with N-((1S,2R)-3-(((1S)-2-(cyclohexylamino)- 1-methyl-2-oxoethyl)amino)-2-hydroxy-1-(phenylmethyl)propyl)-3-(ethylamino)-5-(2-oxo-1-pyrrolidinyl)benzamide
Descriptor: BETA-SECRETASE 1, N-[(1S,2R)-1-benzyl-3-{[(1S)-2-(cyclohexylamino)-1-methyl-2-oxoethyl]amino}-2-hydroxypropyl]-3-(ethylamino)-5-(2-oxopyrrolidin-1-yl)benzamide
Authors:Clarke, B, Cutler, L, Demont, E, Dingwall, C, Dunsdon, R, Hawkins, J, Howes, C, Hussain, I, Maile, G, Matico, R, Mosley, J, Naylor, A, O'Brien, A, Redshaw, S, Rowland, P, Soleil, V, Smith, K.J, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Wayne, G.
Deposit date:2010-05-24
Release date:2010-07-07
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bace-1 Inhibitors Using Novel Edge-to-Face Interaction with Arg-296
Bioorg.Med.Chem.Lett., 20, 2010
4Q7O
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BU of 4q7o by Molmil
The crystal structure of an immunity protein NMB0503 from Neisseria meningitidis MC58
Descriptor: BROMIDE ION, FORMIC ACID, Immunity protein
Authors:Tan, K, Stols, L, Eschenfeldt, W, Babnigg, G, Low, D.A, Hayes, C.S, Goulding, C.W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)
Deposit date:2014-04-25
Release date:2014-05-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The structure of a contact-dependent growth-inhibition (CDI) immunity protein from Neisseria meningitidis MC58.
Acta Crystallogr F Struct Biol Commun, 71, 2015
2WF4
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BU of 2wf4 by Molmil
Human BACE-1 in complex with 6-ethyl-1-methyl-N-((1S)-2-oxo-1-(phenylmethyl)-3-(tetrahydro-2H-pyran-4-ylamino)propyl)-1,3,4,6- tetrahydro(1,2)thiazepino(5,4,3-cd)indole-8-carboxamide 2,2-dioxide
Descriptor: BETA-SECRETASE 1, N-[(1S)-1-BENZYL-2,2-DIHYDROXY-3-(TETRAHYDRO-2H-PYRAN-4-YLAMINO)PROPYL]-6-ETHYL-1-METHYL-1,3,4,6-TETRAHYDRO[1,2]THIAZEPINO[5,4,3-CD]INDOLE-8-CARBOXAMIDE 2,2-DIOXIDE
Authors:Charrier, N, Clarke, B, Cutler, L, Demont, E, Dingwall, C, Dunsdon, R, Hawkins, J, Howes, C, Hubbard, J, Hussain, I, Maile, G, Matico, R, Mosley, J, Naylor, A, O'Brien, A, Redshaw, S, Rowland, P, Soleil, V, Smith, K.J, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Wayne, G.
Deposit date:2009-04-02
Release date:2009-05-12
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Second Generation of Bace-1 Inhibitors Part 3: Towards Non Hydroxyethylamine Transition State Mimetics.
Bioorg.Med.Chem.Lett., 19, 2009
2WF0
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BU of 2wf0 by Molmil
Human BACE-1 in complex with 4-ethyl-N-((1S,2R)-2-hydroxy-1-(phenylmethyl)-3-(((3-(trifluoromethyl)phenyl)methyl)amino)propyl)-8-(2-oxo-1-pyrrolidinyl)-6-quinolinecarboxamide
Descriptor: BETA-SECRETASE 1, N-[(1S,2R)-1-BENZYL-2-HYDROXY-3-{[3-(TRIFLUOROMETHYL)BENZYL]AMINO}PROPYL]-4-ETHYL-8-(2-OXOPYRROLIDIN-1-YL)QUINOLINE-6-CARBOXAMIDE
Authors:Charrier, N, Clarke, B, Cutler, L, Demont, E, Dingwall, C, Dunsdon, R, Hawkins, J, Howes, C, Hubbard, J, Hussain, I, Maile, G, Matico, R, Mosley, J, Naylor, A, O'Brien, A, Redshaw, S, Rowland, P, Soleil, V, Smith, K.J, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Wayne, G.
Deposit date:2009-04-02
Release date:2009-05-19
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Second Generation of Bace-1 Inhibitors. Part 1: The Need for Improved Pharmacokinetics.
Bioorg.Med.Chem.Lett., 19, 2009
4N8I
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BU of 4n8i by Molmil
M31G mutant, RipA structure
Descriptor: 4-hydroxybutyrate coenzyme A transferase, ACETATE ION, COENZYME A
Authors:Torres, R, Goulding, C.W.
Deposit date:2013-10-17
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.011 Å)
Cite:Structural snapshots along the reaction pathway of Yersinia pestis RipA, a putative butyryl-CoA transferase.
Acta Crystallogr.,Sect.D, 70, 2014
2XFI
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BU of 2xfi by Molmil
Human BACE-1 in complex with N-((1S,2R)-3-(((1S)-2-(cyclohexylamino)- 1-methyl-2-oxoethyl)amino)-2-hydroxy-1-(phenylmethyl)propyl)-3-((methylsulfonyl)(phenyl)amino)benzamide
Descriptor: BETA-SECRETASE 1, N-((1S,2R)-3-(((1S)-2-(CYCLOHEXYLAMINO)-1-METHYL-2-OXOETHYL)AMINO)-2-HYDROXY-1-( PHENYLMETHYL)PROPYL)-3-((METHYLSULFONYL)(PHENYL)AMINO) BENZAMIDE
Authors:Clarke, B, Cutler, L, Demont, E, Dingwall, C, Dunsdon, R, Hawkins, J, Howes, C, Hussain, I, Maile, G, Matico, R, Mosley, J, Naylor, A, O'Brien, A, Redshaw, S, Rowland, P, Soleil, V, Smith, K.J, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Wayne, G.
Deposit date:2010-05-24
Release date:2010-07-07
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Bace-1 Inhibitors Using Novel Edge-to-Face Interaction with Arg-296
Bioorg.Med.Chem.Lett., 20, 2010
4N8H
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BU of 4n8h by Molmil
E61V mutant, RipA structure
Descriptor: 4-hydroxybutyrate coenzyme A transferase
Authors:Torres, R, Goulding, C.W.
Deposit date:2013-10-17
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural snapshots along the reaction pathway of Yersinia pestis RipA, a putative butyryl-CoA transferase.
Acta Crystallogr.,Sect.D, 70, 2014
4N8L
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BU of 4n8l by Molmil
E249D mutant, RipA structure
Descriptor: Putative 4-hydroxybutyrate coenzyme A transferase
Authors:Torres, R, Goulding, C.W.
Deposit date:2013-10-17
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.817 Å)
Cite:Structural snapshots along the reaction pathway of Yersinia pestis RipA, a putative butyryl-CoA transferase.
Acta Crystallogr.,Sect.D, 70, 2014
2WF2
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BU of 2wf2 by Molmil
Human BACE-1 in complex with 8-ethyl-N-((1S,2R)-2-hydroxy-3-(((3-(methyloxy)phenyl)methyl)amino)-1-(phenylmethyl)propyl)-1-methyl-3,4,7, 8-tetrahydro-1H,6H-(1,2,5)thiadiazepino(5,4,3-de)quinoxaline-10- carboxamide 2,2-dioxide
Descriptor: BETA-SECRETASE 1, N-{(1S,2R)-1-BENZYL-2-HYDROXY-3-[(3-METHOXYBENZYL)AMINO]PROPYL}-8-ETHYL-1-METHYL-3,4,7,8-TETRAHYDRO-1H,6H-[1,2,5]THIADIAZEPINO[5,4,3-DE]QUINOXALINE-10-CARBOXAMIDE 2,2-DIOXIDE
Authors:Charrier, N, Clarke, B, Demont, E, Dingwall, C, Dunsdon, R, Hawkins, J, Hubbard, J, Hussain, I, Maile, G, Matico, R, Mosley, J, Naylor, A, O'Brien, A, Redshaw, S, Rowland, P, Soleil, V, Smith, K.J, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Wayne, G.
Deposit date:2009-04-02
Release date:2009-05-19
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Second Generation of Bace-1 Inhibitors Part 2: Optimisation of the Non-Prime Side Substituent.
Bioorg.Med.Chem.Lett., 19, 2009
4N8K
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BU of 4n8k by Molmil
E249A mutant, RipA structure
Descriptor: Putative 4-hydroxybutyrate coenzyme A transferase
Authors:Torres, R, Goulding, C.W.
Deposit date:2013-10-17
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural snapshots along the reaction pathway of Yersinia pestis RipA, a putative butyryl-CoA transferase.
Acta Crystallogr.,Sect.D, 70, 2014

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