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PDB: 48 results

8UV0
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Discovery of (4-Pyrazolyl)-2-Aminopyrimidines as Potent and Selective Inhibitors of Cyclin-Dependent Kinase 2
Descriptor: 1-{(4M)-4-[2-{[1-(cyclopropanesulfonyl)piperidin-4-yl]amino}-5-(trifluoromethyl)pyrimidin-4-yl]-1H-pyrazol-1-yl}-2-methylpropan-2-ol, Cyclin-dependent kinase 2
Authors:Deller, M.C, Epling, L.B.
Deposit date:2023-11-02
Release date:2024-02-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of (4-Pyrazolyl)-2-aminopyrimidines as Potent and Selective Inhibitors of Cyclin-Dependent Kinase 2.
J.Med.Chem., 67, 2024
5FV9
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Crystal structure of GalNAc-T2 in complex with compound 16d
Descriptor: 1,2-ETHANEDIOL, GALNAC-T2, GLYCEROL, ...
Authors:Ghirardello, M, Rivas, M, Lacetera, A, Delso, I, Lira-Navarrete, E, Tejero, T, Martin-Santamaria, S, Hurtado-Guerrero, R, Merino, P.
Deposit date:2016-02-03
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Glycomimetics Targeting Glycosyltransferases: Synthetic, Computational and Structural Studies of Less-Polar Conjugates.
Chemistry, 22, 2016
1N5U
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BU of 1n5u by Molmil
X-RAY STUDY OF HUMAN SERUM ALBUMIN COMPLEXED WITH HEME
Descriptor: MYRISTIC ACID, PROTOPORPHYRIN IX CONTAINING FE, SERUM ALBUMIN
Authors:Wardell, M, Wang, Z, Ho, J.X, Robert, J, Ruker, F, Ruble, J, Carter, D.C.
Deposit date:2002-11-07
Release date:2003-06-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Atomic Structure of Human Methemalbumin at 1.9 A
Biochem.Biophys.Res.Commun., 291, 2002
2BRA
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BU of 2bra by Molmil
Structure of N-Terminal FAD Binding motif of mouse MICAL
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, NEDD9 INTERACTING PROTEIN WITH CALPONIN HOMOLOGY AND LIM DOMAINS
Authors:Nadella, M, Bianchet, M.A, Gabelli, S.B, Amzel, L.M.
Deposit date:2005-05-04
Release date:2005-11-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and activity of the axon guidance protein MICAL.
Proc. Natl. Acad. Sci. U.S.A., 102, 2005
1EVS
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BU of 1evs by Molmil
CRYSTAL STRUCTURE OF HUMAN ONCOSTATIN M
Descriptor: ONCOSTATIN M
Authors:Deller, M.C, Hudson, K.R, Ikemizu, S, Bravo, J, Jones, E.Y, Heath, J.K.
Deposit date:2000-04-20
Release date:2000-09-13
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and functional dissection of the cytostatic cytokine oncostatin M.
Structure Fold.Des., 8, 2000
3L4B
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BU of 3l4b by Molmil
Crystal Structure of an Octomeric Two-Subunit TrkA K+ Channel Ring Gating Assembly, TM1088A:TM1088B, from Thermotoga maritima
Descriptor: ADENOSINE MONOPHOSPHATE, TrkA K+ Channel protein TM1088A, TrkA K+ Channel protein TM1088B, ...
Authors:Deller, M.C, Johnson, H.A, Miller, M, Spraggon, G, Wilson, I.A, Lesley, S.A, Joint Center for Structural Genomics (JCSG)
Deposit date:2009-12-18
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Crystal Structure of an Octomeric Two-Subunit TrkA K+ Channel Ring Gating Assembly, TM1088A:TM1088B, from Thermotoga maritima
To be Published
3JXO
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BU of 3jxo by Molmil
Crystal Structure of an Octomeric Two-Subunit TrkA K+ Channel Ring Gating Assembly, TM1088A:TM1088B, from Thermotoga maritima
Descriptor: TrkA-N domain protein
Authors:Deller, M.C, Johnson, H.A, Miller, M, Spraggon, G, Wilson, I.A, Lesley, S.A, Joint Center for Structural Genomics (JCSG)
Deposit date:2009-09-20
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of an Octomeric Two-Subunit TrkA K+ Channel Ring Gating Assembly, TM1088A:TM1088B, from Thermotoga maritima
To be Published
1P8L
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BU of 1p8l by Molmil
New Crystal Structure of Chlorella Virus DNA Ligase-Adenylate
Descriptor: ADENOSINE MONOPHOSPHATE, PBCV-1 DNA ligase
Authors:Odell, M, Malinina, L, Teplova, M, Shuman, S.
Deposit date:2003-05-07
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Analysis of the DNA Joining Repertoire of Chlorella Virus DNA ligase and a New Crystal Structure of the Ligase-Adenylate Intermediate
Nucleic Acids Res., 31, 2003
1FVI
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BU of 1fvi by Molmil
CRYSTAL STRUCTURE OF CHLORELLA VIRUS DNA LIGASE-ADENYLATE
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORELLA VIRUS DNA LIGASE-ADENYLATE, SULFATE ION
Authors:Odell, M, Sriskanda, V, Shuman, S, Nikolov, D.B.
Deposit date:2000-09-20
Release date:2000-11-22
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of eukaryotic DNA ligase-adenylate illuminates the mechanism of nick sensing and strand joining.
Mol.Cell, 6, 2000
5OBX
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BU of 5obx by Molmil
Mycoplasma genitalium DnaK-NBD
Descriptor: Chaperone protein DnaK, GLYCEROL, SULFATE ION, ...
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
5OBW
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BU of 5obw by Molmil
Mycoplasma genitalium DnaK-NBD in complex with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein DnaK, GLYCEROL, ...
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
5OBV
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BU of 5obv by Molmil
Mycoplasma genitalium DnaK deletion mutant lacking SBDalpha in complex with ADP and Pi.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein DnaK, PHOSPHATE ION
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
5OBY
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BU of 5oby by Molmil
Mycoplasma genitalium DnaK-NBD in complex with AMP-PNP
Descriptor: Chaperone protein DnaK, GLYCEROL, MAGNESIUM ION, ...
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
5OBU
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BU of 5obu by Molmil
Mycoplasma genitalium DnaK deletion mutant lacking SBDalpha in complex with AMPPNP.
Descriptor: Chaperone protein DnaK, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
7ZHD
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BU of 7zhd by Molmil
Crystal structure of CtaZ in complex with Closthioamide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SODIUM ION, Transcription activator effector binding, ...
Authors:Gude, F, Molloy, E.M, Horch, T, Dell, M, Dunbar, K.L, Krabbe, J, Groll, M, Hertweck, C.
Deposit date:2022-04-06
Release date:2022-11-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A Specialized Polythioamide-Binding Protein Confers Antibiotic Self-Resistance in Anaerobic Bacteria.
Angew.Chem.Int.Ed.Engl., 61, 2022
7ZHE
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BU of 7zhe by Molmil
Crystal structure of CtaZ from Ruminiclostridium cellulolyticum
Descriptor: GLYCEROL, SODIUM ION, Transcription activator effector binding
Authors:Gude, F, Molloy, E.M, Horch, T, Dell, M, Dunbar, K.L, Krabbe, J, Groll, M, Hertweck, C.
Deposit date:2022-04-06
Release date:2022-11-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Specialized Polythioamide-Binding Protein Confers Antibiotic Self-Resistance in Anaerobic Bacteria.
Angew.Chem.Int.Ed.Engl., 61, 2022
1IRG
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BU of 1irg by Molmil
INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, 20 STRUCTURES
Descriptor: INTERFERON REGULATORY FACTOR-2
Authors:Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y.
Deposit date:1997-11-25
Release date:1998-03-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family.
Structure, 6, 1998
1IRF
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BU of 1irf by Molmil
INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: INTERFERON REGULATORY FACTOR-2
Authors:Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y.
Deposit date:1997-11-24
Release date:1998-01-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family.
Structure, 6, 1998
1JBZ
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BU of 1jbz by Molmil
CRYSTAL STRUCTURE ANALYSIS OF A DUAL-WAVELENGTH EMISSION GREEN FLUORESCENT PROTEIN VARIANT AT HIGH PH
Descriptor: 1,2-ETHANEDIOL, GREEN FLUORESCENT PROTEIN, MAGNESIUM ION
Authors:Hanson, G.T, McAnaney, T.B, Park, E.S, Rendell, M.E.P, Yarbrough, D.K, Chu, S, Xi, L, Boxer, S.G, Montrose, M.H, Remington, S.J.
Deposit date:2001-06-07
Release date:2003-01-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Green Fluorescent Protein Variants as Ratiometric Dual Emission pH Sensors. 1. Structural Characterization and Preliminary Application.
Biochemistry, 41, 2002
1CKK
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BU of 1ckk by Molmil
CALMODULIN/RAT CA2+/CALMODULIN DEPENDENT PROTEIN KINASE FRAGMENT
Descriptor: CALCIUM ION, Calcium/calmodulin-dependent protein kinase kinase 1, Calmodulin-1
Authors:Osawa, M, Tokumitsu, H, Swindells, M.B, Kurihara, H, Orita, M, Shibanuma, T, Furuya, T, Ikura, M.
Deposit date:1998-11-20
Release date:1999-09-10
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:A novel target recognition revealed by calmodulin in complex with Ca2+-calmodulin-dependent kinase kinase.
Nat.Struct.Biol., 6, 1999
7QRE
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BU of 7qre by Molmil
Structure of the hetero-tetramer complex between precursor membrane protein fragment (pr) and envelope protein (E) from tick-borne encephalitis virus
Descriptor: ACETATE ION, Envelope protein E, Genome polyprotein, ...
Authors:Vaney, M.C, Dellarole, M, Rey, F.A.
Deposit date:2022-01-11
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Evolution and activation mechanism of the flavivirus class II membrane-fusion machinery.
Nat Commun, 13, 2022
6OFO
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BU of 6ofo by Molmil
Crystal structure of split green fluorescent protein (GFP); s10 circular permutant (194-195)
Descriptor: Green fluorescent protein (GFP); s10 circular permutant (194-195)
Authors:Lin, C.-Y, Romei, M.G, Deller, M.C, Doukov, T.I, Boxer, S.G.
Deposit date:2019-03-31
Release date:2019-07-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
8RNY
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BU of 8rny by Molmil
Hen Egg White Lysozyme soaked with with [H2Ind][trans-RuCl4(DMSO)(HInd)]
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-02-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
8E1X
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FGFR2 kinase domain in complex with a Pyrazolo[1,5-a]pyrimidine analog (Compound 29)
Descriptor: (5M)-N-methyl-5-{(6M,8S)-5-{[(3S)-oxolan-3-yl]amino}-6-[1-(propan-2-yl)-1H-pyrazol-3-yl]pyrazolo[1,5-a]pyrimidin-3-yl}pyridine-3-carboxamide, Fibroblast growth factor receptor 2
Authors:Lei, H.-T, Epling, L.B, Deller, M.C.
Deposit date:2022-08-11
Release date:2022-11-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Discovery of Potent and Selective Inhibitors of Wild-Type and Gatekeeper Mutant Fibroblast Growth Factor Receptor (FGFR) 2/3.
J.Med.Chem., 65, 2022
8RNW
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BU of 8rnw by Molmil
Hen Egg White Lysozyme soaked with trans-Ru(DMSO)4Cl2
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-01-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024

 

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