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PDB: 84 件
6XNR
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BU of 6xnr by Molmil
Crystal structure of Rhagium Mordax antifreeze protein
分子名称: 1,2-ETHANEDIOL, Antifreeze protein
著者Ye, Q, Eves, R, Campbell, R.L, Davies, P.L.
登録日2020-07-04
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of an insect antifreeze protein reveals ordered waters on the ice-binding surface.
Biochem.J., 477, 2020
6XI3
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BU of 6xi3 by Molmil
Crystal structure of tetra-tandem repeat in extending region of large adhesion protein
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Ye, Q, Vance, T.D.R, Davies, P.L.
登録日2020-06-19
公開日2020-10-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Essential role of calcium in extending RTX adhesins to their target.
J Struct Biol X, 4, 2020
6X7X
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BU of 6x7x by Molmil
mannose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
著者Guo, S, Davies, P.L.
登録日2020-05-31
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6XAQ
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BU of 6xaq by Molmil
Alpha-methyl-glucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, methyl alpha-D-glucopyranoside
著者Guo, S, Davies, P.L.
登録日2020-06-04
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X95
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BU of 6x95 by Molmil
2-deoxy-glucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, 2-deoxy-alpha-D-arabino-hexopyranose, Antifreeze protein, ...
著者Guo, S, Davies, P.L.
登録日2020-06-02
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7Z
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BU of 6x7z by Molmil
Inositol-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1,2-ETHANEDIOL, Antifreeze protein, ...
著者Guo, S, Davies, P.L.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X9P
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BU of 6x9p by Molmil
2-deoxyribose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, 2-deoxy-beta-D-ribopyranose, Antifreeze protein, ...
著者Guo, S, Davies, P.L.
登録日2020-06-03
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7T
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BU of 6x7t by Molmil
Allose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, alpha-D-allofuranose, ...
著者Guo, S, Davies, P.L.
登録日2020-05-30
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X8A
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BU of 6x8a by Molmil
Sucrose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Guo, S, Davies, P.L.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X8D
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BU of 6x8d by Molmil
Arabinose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
著者Guo, S, Davies, P.L.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6XA5
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BU of 6xa5 by Molmil
Trehalose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Guo, S, Davies, P.L.
登録日2020-06-03
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X9M
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BU of 6x9m by Molmil
3-O-methyl-glucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, 3-O-methyl-beta-D-glucopyranose, Antifreeze protein, ...
著者Guo, S, Davies, P.L.
登録日2020-06-03
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7J
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BU of 6x7j by Molmil
fucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
著者Guo, S, Davies, P.L.
登録日2020-05-30
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7Y
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BU of 6x7y by Molmil
N-acetyl-glucosamine-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guo, S, Davies, P.L.
登録日2020-05-31
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X8Y
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BU of 6x8y by Molmil
Ribose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
著者Guo, S, Davies, P.L.
登録日2020-06-02
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6XAC
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BU of 6xac by Molmil
Galactose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, beta-D-galactopyranose
著者Guo, S, Davies, P.L.
登録日2020-06-04
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X6M
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BU of 6x6m by Molmil
Peptide-bound structure of Marinomonas primoryensis peptide-binding domain
分子名称: Antifreeze protein, CALCIUM ION, PENTAETHYLENE GLYCOL, ...
著者Guo, S, Davies, P.L.
登録日2020-05-28
公開日2021-09-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis for a bacterial adhesins peptide-binding module
To Be Published
6X5V
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BU of 6x5v by Molmil
Peptide-bound structure of Marinomonas primoryensis peptide-binding domain
分子名称: Antifreeze protein, CALCIUM ION, PENTAETHYLENE GLYCOL, ...
著者Guo, S, Davies, P.L.
登録日2020-05-27
公開日2021-09-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular basis for a bacterial adhesins peptide-binding module
To Be Published
6X5W
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BU of 6x5w by Molmil
Peptide-bound structure of Marinomonas primoryensis peptide-binding domain
分子名称: Antifreeze protein, CALCIUM ION, PENTAETHYLENE GLYCOL, ...
著者Guo, S, Davies, P.L.
登録日2020-05-27
公開日2021-09-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis for a bacterial adhesins peptide-binding module
To Be Published
6X6Q
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BU of 6x6q by Molmil
Peptide-bound structure of Marinomonas primoryensis peptide-binding domain
分子名称: ASP-SER-ASP, Antifreeze protein, CALCIUM ION, ...
著者Guo, S, Davies, P.L.
登録日2020-05-28
公開日2021-09-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Molecular basis for a bacterial adhesins peptide-binding module
To Be Published
4MSI
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BU of 4msi by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
分子名称: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
著者Deluca, C.I, Davies, P.L, Ye, Q, Jia, Z.
登録日1997-09-16
公開日1998-10-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The effects of steric mutations on the structure of type III antifreeze protein and its interaction with ice.
J.Mol.Biol., 275, 1998
4OKH
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BU of 4okh by Molmil
Crystal structure of calpain-3 penta-EF-hand domain
分子名称: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, CALCIUM ION, Calpain-3
著者Karunan Partha, S, Ravulapalli, R, Campbell, R.L, Allingham, J.S, Davies, P.L.
登録日2014-01-22
公開日2014-05-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of calpain-3 penta-EF-hand (PEF) domain - a homodimerized PEF family member with calcium bound at the fifth EF-hand.
Febs J., 281, 2014
4P99
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BU of 4p99 by Molmil
Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Guo, S, Vance, D.R.T, Campbell, R.L, Davies, P.L.
登録日2014-04-02
公開日2014-06-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice.
Biosci.Rep., 34, 2014
2NQI
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BU of 2nqi by Molmil
Calpain 1 proteolytic core inactivated by WR13(R,R), an epoxysuccinyl-type inhibitor.
分子名称: CALCIUM ION, Calpain-1 catalytic subunit, N~2~-[(2S)-2-{[(2R)-4-ETHOXY-2-HYDROXY-4-OXOBUTANOYL]AMINO}PENT-4-ENOYL]-L-ARGINYL-L-TRYPTOPHANAMIDE
著者Cuerrier, D, Davies, P.L, Campbell, R.L, Moldoveanu, T.
登録日2006-10-31
公開日2007-01-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Development of Calpain-specific Inactivators by Screening of Positional Scanning Epoxide Libraries
J.Biol.Chem., 282, 2007
2NQG
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BU of 2nqg by Molmil
Calpain 1 proteolytic core inactivated by WR18(S,S), an epoxysuccinyl-type inhibitor.
分子名称: 5-AZANYLIDYNE-N-[(2S)-4-ETHOXY-2-HYDROXY-4-OXOBUTANOYL]-L-NORVALYL-L-ARGINYL-L-TRYPTOPHANAMIDE, CALCIUM ION, Calpain-1 catalytic subunit
著者Cuerrier, D, Davies, P.L, Campbell, R.L, Moldoveanu, T.
登録日2006-10-31
公開日2007-01-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Development of Calpain-specific Inactivators by Screening of Positional Scanning Epoxide Libraries
J.Biol.Chem., 282, 2007

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件を2024-05-29に公開中

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