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PDB: 103 件

4MZ3
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Crystal structure of the voltage-gated sodium channel beta 4 subunit extracellular domain, C131W mutant
分子名称: Sodium channel subunit beta-4
著者Das, S, Van Petegem, F.
登録日2013-09-28
公開日2013-12-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.741 Å)
主引用文献Crystallographic insights into sodium-channel modulation by the beta 4 subunit.
Proc.Natl.Acad.Sci.USA, 110, 2013
6U96
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Actin phalloidin at BeFx state
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Das, S, Ge, P, Durer, Z.A.O, Grintsevich, E.E, Zhou, Z.H, Reisler, E.
登録日2019-09-06
公開日2020-05-13
最終更新日2020-05-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献D-loop Dynamics and Near-Atomic-Resolution Cryo-EM Structure of Phalloidin-Bound F-Actin.
Structure, 28, 2020
6U3E
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Best fitting antiparallel model for Volume 1 of truncated dimeric Cytohesin-3 (Grp1; amino acids 14-399)
分子名称: Cytohesin-3, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
著者Das, S, Lambright, D.G.
登録日2019-08-21
公開日2019-09-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (53 Å)
主引用文献Structural Organization and Dynamics of Homodimeric Cytohesin Family Arf GTPase Exchange Factors in Solution and on Membranes.
Structure, 27, 2019
6VSV
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Crystal structure of a disease mutant of the Voltage-gated Sodium Channel Beta 4 subunit extracellular domain
分子名称: Sodium channel subunit beta-4
著者Das, S, Van Petegem, F.
登録日2020-02-12
公開日2020-08-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Biophysical Investigation of Sodium Channel Interaction with beta-Subunit Variants Associated with Arrhythmias.
Bioelectricity, 2, 2020
6VRR
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Crystal structure of a disease mutant of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain
分子名称: GLYCEROL, Sodium channel subunit beta-2
著者Das, S, Van Petegem, F.
登録日2020-02-09
公開日2020-08-26
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Biophysical Investigation of Sodium Channel Interaction with beta-Subunit Variants Associated with Arrhythmias.
Bioelectricity, 2, 2020
6U3G
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Best fitting antiparallel model for Volume 2 of truncated dimeric Cytohesin-3 (Grp1; amino acids 14-399)
分子名称: Cytohesin-3, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
著者Das, S, Lambright, D.G.
登録日2019-08-21
公開日2019-09-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (53 Å)
主引用文献Structural Organization and Dynamics of Homodimeric Cytohesin Family Arf GTPase Exchange Factors in Solution and on Membranes.
Structure, 27, 2019
6BBP
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Model for compact volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A 6GS Arf6 Q67L fusion protein
分子名称: Cytohesin-3,ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, ...
著者Das, S, Malaby, A.W, Lambright, D.G.
登録日2017-10-19
公開日2018-01-10
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Structural Dynamics Control Allosteric Activation of Cytohesin Family Arf GTPase Exchange Factors.
Structure, 26, 2018
6BBQ
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Model for extended volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A Arf6 Q67L fusion protein
分子名称: Cytohesin-3,ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, ...
著者Das, S, Malaby, A.W, Lambright, D.G.
登録日2017-10-19
公開日2018-01-10
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Structural Dynamics Control Allosteric Activation of Cytohesin Family Arf GTPase Exchange Factors.
Structure, 26, 2018
8GMX
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Crystal structure of pilin-specific sortase SrtC2 from Lactobacillus rhamnosus GG
分子名称: Class C sortase
著者Das, S, Megta, A.K, Pratap, S, Krishnan, V.
登録日2022-08-22
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal structure of pilin-specific sortase SrtC2 from Lactobacillus rhamnosus GG
To Be Published
5FEB
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BU of 5feb by Molmil
Crystal structure of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain
分子名称: GLYCEROL, Sodium channel subunit beta-2
著者Das, S, Van Petegem, F.
登録日2015-12-16
公開日2016-03-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Binary architecture of the Nav1.2-beta 2 signaling complex.
Elife, 5, 2016
5FDY
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Crystal structure of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain, C72A/C75A mutant
分子名称: GLYCEROL, Sodium channel subunit beta-2
著者Das, S, Van Petegem, F.
登録日2015-12-16
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Binary architecture of the Nav1.2-beta 2 signaling complex.
Elife, 5, 2016
5HGC
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A Serpin structure
分子名称: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranose, SULFATE ION, ...
著者Das, S, Vashchenko, G.V, Van Petegem, F.
登録日2016-01-08
公開日2016-04-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献A Serpin structure
J.Biol.Chem., 2016
5GO6
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Structure of sortase E T196V mutant from Streptomyces avermitilis
分子名称: Putative secreted protein, SULFATE ION
著者Das, S, Pawale, V.S, Dadireddy, V, Roy, R.P, Ramakumar, S.
登録日2016-07-26
公開日2017-07-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of sortase E T196V mutant from Streptomyces avermitilis
To Be Published
5GO5
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Structure of sortase E from Streptomyces avermitilis
分子名称: GLYCINE, SULFATE ION, sortase
著者Das, S, Pawale, V.S, Dadireddy, V, Roy, R.P, Ramakumar, S.
登録日2016-07-26
公開日2017-03-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure and specificity of a new class of Ca2+-independent housekeeping sortase from Streptomyces avermitilis provide insights into its non-canonical substrate preference.
J. Biol. Chem., 292, 2017
4I2N
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BU of 4i2n by Molmil
Crystal structure of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Intracellular protease/amidase
著者Das, S, Sen, U.
登録日2012-11-22
公開日2013-11-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Temperature dependent structural flexibility and functional activation of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
To be Published
4MZ2
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BU of 4mz2 by Molmil
Crystal structure of the voltage-gated sodium channel beta 4 subunit extracellular domain
分子名称: Sodium channel subunit beta-4
著者Das, S, Van Petegem, F.
登録日2013-09-28
公開日2013-12-04
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.722 Å)
主引用文献Crystallographic insights into sodium-channel modulation by the beta 4 subunit.
Proc.Natl.Acad.Sci.USA, 110, 2013
2GES
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BU of 2ges by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-I (RT)
分子名称: Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GET
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BU of 2get by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-I (LT)
分子名称: GLYCEROL, Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEV
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BU of 2gev by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-II (LT)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Pantothenate kinase, ...
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEU
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BU of 2geu by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-II (RT)
分子名称: Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
1OOC
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BU of 1ooc by Molmil
Mutations in the T1.5 loop of pectate lyase A
分子名称: Pectate lyase A
著者Dehdashti, S.J, Doan, C.N, Chao, K, Vordtriede, P.B, Yoder, M.D.
登録日2003-03-03
公開日2004-03-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Effect of mutations in the T1.5 loop of pectate lyase A from Erwinia chrysanthemi EC16.
Acta Crystallogr.,Sect.D, 59, 2003
1PE9
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MUTATIONS IN THE T1.5 LOOP OF PECTATE LYASE A
分子名称: Pectate lyase A
著者Dehdashti, S.J, Doan, C.N, Chao, K.L, Yoder, M.D.
登録日2003-05-21
公開日2004-03-16
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Effect of mutations in the T1.5 loop of pectate lyase A from Erwinia chrysanthemi EC16.
Acta Crystallogr.,Sect.D, 59, 2003
5V3I
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Crystal structure of the VS ribozyme - wild-type C634
分子名称: VS Ribozyme RNA
著者DasGupta, S, Suslov, N.B, Piccirilli, J.A.
登録日2017-03-07
公開日2017-07-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.293 Å)
主引用文献Structural Basis for Substrate Helix Remodeling and Cleavage Loop Activation in the Varkud Satellite Ribozyme.
J. Am. Chem. Soc., 139, 2017
3H8B
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A combined crystallographic and molecular dynamics study of cathepsin-L retro-binding inhibitors(compound 9)
分子名称: Cathepsin L1, N~2~,N~6~-bis(biphenyl-4-ylacetyl)-L-lysyl-D-arginyl-N-(2-phenylethyl)-L-phenylalaninamide
著者Tulsidas, S.R, Chowdhury, S.F, Kumar, S, Joseph, L, Purisima, E.O, Sivaraman, J.
登録日2009-04-29
公開日2009-10-20
最終更新日2014-02-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A combined crystallographic and molecular dynamics study of cathepsin L retrobinding inhibitors
J.Med.Chem., 52, 2009
3H89
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A combined crystallographic and molecular dynamics study of cathepsin-L retro-binding inhibitors(compound 4)
分子名称: Cathepsin L1, N~2~,N~6~-bis(biphenyl-4-ylacetyl)-L-lysyl-D-arginyl-N-(2-phenylethyl)-L-tyrosinamide
著者Tulsidas, S.R, Chowdhury, S.F, Kumar, S, Joseph, L, Purisima, E.O, Sivaraman, J.
登録日2009-04-29
公開日2009-10-20
最終更新日2014-02-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A combined crystallographic and molecular dynamics study of cathepsin L retrobinding inhibitors
J.Med.Chem., 52, 2009

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