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PDB: 1609 件

2W92
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Structure of a Streptococcus pneumoniae family 85 glycoside hydrolase, Endo-D, in complex with NAG-thiazoline.
分子名称: 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, ENDO-BETA-N-ACETYLGLUCOSAMINIDASE D, PENTAETHYLENE GLYCOL
著者Abbott, D.W, Macauley, M.S, Vocadlo, D.J, Boraston, A.B.
登録日2009-01-21
公開日2009-01-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Streptococcus Pneumoniae Endohexosaminidase D, Structural and Mechanistic Insight Into Substrate-Assisted Catalysis in Family 85 Glycoside Hydrolases.
J.Biol.Chem., 284, 2009
3S1A
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BU of 3s1a by Molmil
Crystal structure of the phosphorylation-site double mutant S431E/T432E of the KaiC circadian clock protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
著者Pattanayek, R, Williams, D.W, Rossi, G, Weigand, S, Mori, T, Johnson, C.H, Stewart, P.L, Egli, M.
登録日2011-05-14
公開日2011-09-21
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Combined SAXS/EM Based Models of the S. elongatus Post-Translational Circadian Oscillator and its Interactions with the Output His-Kinase SasA.
Plos One, 6, 2011
7JUN
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BU of 7jun by Molmil
Joint neutron/X-ray structure of SARS-CoV-2 3CL Mpro at room temperature
分子名称: 3C-like proteinase
著者Kovalevsky, A, Kneller, D.W, Coates, L.
登録日2020-08-20
公開日2020-09-02
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (2.3 Å), X-RAY DIFFRACTION
主引用文献Unusual zwitterionic catalytic site of SARS-CoV-2 main protease revealed by neutron crystallography.
J.Biol.Chem., 295, 2020
1SSW
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BU of 1ssw by Molmil
Crystal structure of phage T4 lysozyme mutant Y24A/Y25A/T26A/I27A/C54T/C97A
分子名称: BETA-MERCAPTOETHANOL, Lysozyme
著者He, M.M, Baase, W.A, Xiao, H, Heinz, D.W, Matthews, B.W.
登録日2004-03-24
公開日2004-10-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Alanine-scanning mutagenesis of the beta-sheet region of phage T4 lysozyme suggests that tertiary context has a dominant effect on beta-sheet formation
Protein Sci., 13, 2004
1SSY
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BU of 1ssy by Molmil
Crystal structure of phage T4 lysozyme mutant G28A/I29A/G30A/C54T/C97A
分子名称: Lysozyme
著者He, M.M, Baase, W.A, Xiao, H, Heinz, D.W, Matthews, B.W.
登録日2004-03-24
公開日2004-10-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Alanine-scanning mutagenesis of the beta-sheet region of phage T4 lysozyme suggests that tertiary context has a dominant effect on beta-sheet formation
Protein Sci., 13, 2004
1TDT
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BU of 1tdt by Molmil
THREE-DIMENSIONAL STRUCTURE OF TETRAHYDRODIPICOLINATE-N-SUCCINYLTRANSFERASE
分子名称: TETRAHYDRODIPICOLINATE-N-SUCCINYLTRANSFERASE
著者Beaman, T.W, Binder, D.W, Blanchard, J.S, Roderick, S.L.
登録日1996-11-19
公開日1997-06-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Three-dimensional structure of tetrahydrodipicolinate N-succinyltransferase.
Biochemistry, 36, 1997
7FF1
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BU of 7ff1 by Molmil
Structure of C34E136G/N36
分子名称: gp41 C34E136G, gp41 N36
著者Yu, D.W, Qin, B.
登録日2021-07-22
公開日2022-11-23
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.689 Å)
主引用文献Structure of C34E136G/N36
To Be Published
1ZWJ
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BU of 1zwj by Molmil
X-ray structure of galt-like protein from arabidopsis thaliana AT5G18200
分子名称: ZINC ION, putative galactose-1-phosphate uridyl transferase
著者Wesenberg, G.E, Smith, D.W, Phillips Jr, G.N, McCoy, J.G, Johnson, K.A, Bitto, E, Bingman, C.A, Allard, S.T.M, Center for Eukaryotic Structural Genomics (CESG)
登録日2005-06-03
公開日2005-06-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Mechanism of an ADP-Glucose Phosphorylase from Arabidopsis thaliana
Biochemistry, 45, 2006
7JTH
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Cryo-EM structure of unliganded octameric prenyltransferase domain of Phomopsis amygdali fusicoccadiene synthase
分子名称: Fusicoccadiene synthase
著者Faylo, J.L, van Eeuwen, T, Murakami, K, Christianson, D.W.
登録日2020-08-17
公開日2021-04-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural insight on assembly-line catalysis in terpene biosynthesis.
Nat Commun, 12, 2021
7JOM
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BU of 7jom by Molmil
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with TO-317
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Hdac6 protein, ...
著者Watson, P.R, Christianson, D.W.
登録日2020-08-06
公開日2021-06-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Unique Molecular Interaction with the Histone Deacetylase 6 Catalytic Tunnel: Crystallographic and Biological Characterization of a Model Chemotype.
J.Med.Chem., 64, 2021
7JJN
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Eubacterium rectale Amy13B (EUR_01860)
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
著者Koropatkin, N.M, Cockburn, D.W, Cerqueira, F.M.
登録日2020-07-27
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The structures of the GH13_36 amylases from Eubacterium rectale and Ruminococcus bromii reveal subsite architectures that favor maltose production
Amylase, 4, 2020
7JQE
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BU of 7jqe by Molmil
Structure of an extracellular fragment of EsaA from Streptococcus gallolyticus
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, ESAT-6/WXG100 secretion system protein
著者Klein, T.A, Grebenc, D.W, Kim, Y, Whitney, J.C.
登録日2020-08-10
公開日2020-11-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the Extracellular Region of the Bacterial Type VIIb Secretion System Subunit EsaA.
Structure, 29, 2021
7KJG
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F96M epi-isozizaene synthase: complex with 3 Mg2+ and BTAC
分子名称: GLYCEROL, MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium, ...
著者Ronnebaum, T.A, Gardner, S.M, Christianson, D.W.
登録日2020-10-26
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献An Aromatic Cluster in the Active Site of epi -Isozizaene Synthase Is an Electrostatic Toggle for Divergent Terpene Cyclization Pathways.
Biochemistry, 59, 2020
7KJD
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F96M epi-isozizaene synthase: complex with 3 Mg2+ and risedronate
分子名称: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID, MAGNESIUM ION, SULFATE ION, ...
著者Ronnebaum, T.A, Gardner, S.M, Christianson, D.W.
登録日2020-10-26
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献An Aromatic Cluster in the Active Site of epi -Isozizaene Synthase Is an Electrostatic Toggle for Divergent Terpene Cyclization Pathways.
Biochemistry, 59, 2020
7JHY
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BU of 7jhy by Molmil
Type IV-B CRISPR Complex
分子名称: Csf2 (Cas7), Csf4 (Cas11), RNA (31-MER)
著者Bravo, J.P.K, Taylor, D.W.
登録日2020-07-21
公開日2021-03-31
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of a type IV CRISPR-Cas ribonucleoprotein complex.
Iscience, 24, 2021
7KJF
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BU of 7kjf by Molmil
Wild-type epi-isozizaene synthase: complex with 3 Mg2+ and neridronate
分子名称: (6-azanyl-1-oxidanyl-1-phosphono-hexyl)phosphonic acid, GLYCEROL, MAGNESIUM ION, ...
著者Ronnebaum, T.A, Gardner, S.M, Christianson, D.W.
登録日2020-10-26
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献An Aromatic Cluster in the Active Site of epi -Isozizaene Synthase Is an Electrostatic Toggle for Divergent Terpene Cyclization Pathways.
Biochemistry, 59, 2020
7KUS
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BU of 7kus by Molmil
Crystal Structure of Danio rerio Histone Deacetylase 10 H137A Mutant in Complex with N8-Acetylspermidine (Tetrahedral Intermediate)
分子名称: 1,2-ETHANEDIOL, 1-({4-[(3-aminopropyl)amino]butyl}amino)ethane-1,1-diol, DI(HYDROXYETHYL)ETHER, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2020-11-25
公開日2021-02-03
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray Crystallographic Snapshots of Substrate Binding in the Active Site of Histone Deacetylase 10.
Biochemistry, 60, 2021
7KJ9
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BU of 7kj9 by Molmil
Wild-type epi-isozizaene synthase: complex with 3 Mg2+ and risedronate
分子名称: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID, MAGNESIUM ION, SULFATE ION, ...
著者Ronnebaum, T.A, Gardner, S.M, Christianson, D.W.
登録日2020-10-26
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献An Aromatic Cluster in the Active Site of epi -Isozizaene Synthase Is an Electrostatic Toggle for Divergent Terpene Cyclization Pathways.
Biochemistry, 59, 2020
7JVV
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Crystal structure of human histone deacetylase 8 (HDAC8) E66D/Y306F double mutation complexed with a tetrapeptide substrate
分子名称: 1,2-ETHANEDIOL, ACE-ARG-HIS-ALY-ALY-MCM, GLYCEROL, ...
著者Osko, J.D, Christianson, D.W, Decroos, C, Porter, N.J, Lee, M.
登録日2020-08-24
公開日2020-12-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural analysis of histone deacetylase 8 mutants associated with Cornelia de Lange Syndrome spectrum disorders.
J.Struct.Biol., 213, 2020
7JVU
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BU of 7jvu by Molmil
Crystal structure of human histone deacetylase 8 (HDAC8) I45T mutation complexed with SAHA
分子名称: 1,2-ETHANEDIOL, Histone deacetylase 8, OCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE, ...
著者Osko, J.D, Christianson, D.W, Decroos, C, Porter, N.J, Lee, M.
登録日2020-08-24
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5004766 Å)
主引用文献Structural analysis of histone deacetylase 8 mutants associated with Cornelia de Lange Syndrome spectrum disorders.
J.Struct.Biol., 213, 2020
7JVW
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Crystal structure of human histone deacetylase 8 (HDAC8) G320R mutation complexed with M344
分子名称: 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide, Histone deacetylase 8, POTASSIUM ION, ...
著者Osko, J.D, Christianson, D.W, Decroos, C, Porter, N.J, Lee, M.
登録日2020-08-24
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.40301776 Å)
主引用文献Structural analysis of histone deacetylase 8 mutants associated with Cornelia de Lange Syndrome spectrum disorders.
J.Struct.Biol., 213, 2020
7KUQ
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BU of 7kuq by Molmil
Crystal Structure of Danio rerio Histone Deacetylase 10 Y307F Mutant in Complex with N8-Acetylspermidine
分子名称: N-{4-[(3-aminopropyl)amino]butyl}acetamide, PHOSPHATE ION, POTASSIUM ION, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2020-11-25
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray Crystallographic Snapshots of Substrate Binding in the Active Site of Histone Deacetylase 10.
Biochemistry, 60, 2021
7KUR
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BU of 7kur by Molmil
Crystal Structure of Danio rerio Histone Deacetylase 10 Y307F Mutant in Complex with N-Acetylputrescine
分子名称: DI(HYDROXYETHYL)ETHER, N-(4-aminobutyl)acetamide, PHOSPHATE ION, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2020-11-25
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray Crystallographic Snapshots of Substrate Binding in the Active Site of Histone Deacetylase 10.
Biochemistry, 60, 2021
7KJE
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BU of 7kje by Molmil
F96S epi-isozizaene synthase: complex with 3 Mg2+ and neridronate
分子名称: (6-azanyl-1-oxidanyl-1-phosphono-hexyl)phosphonic acid, MAGNESIUM ION, SULFATE ION, ...
著者Ronnebaum, T.A, Gardner, S, Christianson, D.W.
登録日2020-10-26
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献An Aromatic Cluster in the Active Site of epi -Isozizaene Synthase Is an Electrostatic Toggle for Divergent Terpene Cyclization Pathways.
Biochemistry, 59, 2020
7KUT
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Crystal Structure of Danio rerio Histone Deacetylase 10 H137A Mutant in Complex with N-Acetylputrescine (Tetrahedral Intermediate)
分子名称: 1,2-ETHANEDIOL, 1-[(4-aminobutyl)amino]ethane-1,1-diol, DI(HYDROXYETHYL)ETHER, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2020-11-25
公開日2021-02-03
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献X-ray Crystallographic Snapshots of Substrate Binding in the Active Site of Histone Deacetylase 10.
Biochemistry, 60, 2021

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