Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1951 results

1Z17
DownloadVisualize
BU of 1z17 by Molmil
Crystal structure analysis of periplasmic Leu/Ile/Val-binding protein with bound ligand isoleucine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, ISOLEUCINE, Leu/Ile/Val-binding protein
Authors:Trakhanov, S.D, Vyas, N.K, Kristensen, D.M, Ma, J, Quiocho, F.A.
Deposit date:2005-03-03
Release date:2005-10-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Ligand-free and -bound structures of the binding protein (LivJ) of the Escherichia coli ABC leucine/isoleucine/valine transport system: trajectory and dynamics of the interdomain rotation and ligand specificity.
Biochemistry, 44, 2005
1Z5L
DownloadVisualize
BU of 1z5l by Molmil
Structure of a highly potent short-chain galactosyl ceramide agonist bound to CD1D
Descriptor: (2S,3S,4R)-N-OCTANOYL-1-[(ALPHA-D-GALACTOPYRANOSYL)OXY]-2-AMINO-OCTADECANE-3,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zajonc, D.M, Cantu, C, Mattner, J, Zhou, D, Savage, P.B, Bendelac, A, Wilson, I.A, Teyton, L.
Deposit date:2005-03-18
Release date:2005-07-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and function of a potent agonist for the semi-invariant natural killer T cell receptor.
Nat.Immunol., 6, 2005
1ZA3
DownloadVisualize
BU of 1za3 by Molmil
The crystal structure of the YSd1 Fab bound to DR5
Descriptor: Fab-YSd1 heavy chain, Fab-YSd1 light chain, Tumor necrosis factor receptor superfamily member 10B
Authors:Fellouse, F.A, Li, B, Compaan, D.M, Peden, A.A, Hymowitz, S.G, Sidhu, S.S.
Deposit date:2005-04-05
Release date:2005-06-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Molecular recognition by a binary code.
J.Mol.Biol., 348, 2005
1IC0
DownloadVisualize
BU of 1ic0 by Molmil
RED COPPER PROTEIN NITROSOCYANIN FROM NITROSOMONAS EUROPAEA
Descriptor: COPPER (II) ION, Nitrosocyanin
Authors:Lieberman, R.L, Arciero, D.M, Hooper, A.B, Rosenzweig, A.C.
Deposit date:2001-03-29
Release date:2001-06-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a novel red copper protein from Nitrosomonas europaea.
Biochemistry, 40, 2001
1ZFN
DownloadVisualize
BU of 1zfn by Molmil
Structural Analysis of Escherichia coli ThiF
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenylyltransferase thiF, ZINC ION
Authors:Duda, D.M, Walden, H, Sfondouris, J, Schulman, B.A.
Deposit date:2005-04-20
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural Analysis of Escherichia Coli ThiF.
J.Mol.Biol., 349, 2005
1LDJ
DownloadVisualize
BU of 1ldj by Molmil
Structure of the Cul1-Rbx1-Skp1-F boxSkp2 SCF Ubiquitin Ligase Complex
Descriptor: Cullin homolog 1, ZINC ION, ring-box protein 1
Authors:Zheng, N, Schulman, B.A, Song, L, Miller, J.J, Jeffrey, P.D, Wang, P, Chu, C, Koepp, D.M, Elledge, S.J, Pagano, M, Conaway, R.C, Conaway, J.W, Harper, J.W, Pavletich, N.P.
Deposit date:2002-04-08
Release date:2002-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Cul1-Rbx1-Skp1-F boxSkp2 SCF ubiquitin ligase complex.
Nature, 416, 2002
4Q9Z
DownloadVisualize
BU of 4q9z by Molmil
Human Protein Kinase C Theta in Complex with Compound35 ((1R)-9-(AZETIDIN-3-YLAMINO)-1,8-DIMETHYL-3,5-DIHYDRO[1,2,4]TRIAZINO[3,4-C][1,4]BENZOXAZIN-2(1H)-ONE)
Descriptor: (1R)-9-(azetidin-3-ylamino)-1,8-dimethyl-3,5-dihydro[1,2,4]triazino[3,4-c][1,4]benzoxazin-2(1H)-one, HUMAN PROTEIN KINASE C THETA, SODIUM ION
Authors:Argiriadi, M.A, George, D.M.
Deposit date:2014-05-02
Release date:2014-07-02
Last modified:2015-01-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Discovery of Selective and Orally Bioavailable Protein Kinase C theta (PKC theta ) Inhibitors from a Fragment Hit.
J.Med.Chem., 58, 2015
1LII
DownloadVisualize
BU of 1lii by Molmil
STRUCTURE OF T. GONDII ADENOSINE KINASE BOUND TO ADENOSINE 2 AND AMP-PCP
Descriptor: ADENOSINE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Roos, D.S, Ullman, B, Brennan, R.G.
Deposit date:2002-04-17
Release date:2002-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
1LKM
DownloadVisualize
BU of 1lkm by Molmil
Crystal structure of Desulfovibrio vulgaris rubrerythrin all-iron(III) form
Descriptor: FE (III) ION, Rubrerythrin all-iron(III) form
Authors:Jin, S, Kurtz Jr, D.M, Liu, Z.J, Rose, J, Wang, B.C.
Deposit date:2002-04-25
Release date:2002-09-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:X-ray Crystal Structures of Reduced Rubrerythrin and its Azide Adduct: A Structure-Based Mechanism for a Non-Heme DiIron Peroxidase
J.Am.Chem.Soc., 124, 2002
1JKT
DownloadVisualize
BU of 1jkt by Molmil
TETRAGONAL CRYSTAL FORM OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE
Authors:Tereshko, V, Teplova, M, Brunzelle, J, Watterson, D.M, Egli, M.
Deposit date:2001-07-13
Release date:2002-04-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structures of the catalytic domain of human protein kinase associated with apoptosis and tumor suppression.
Nat.Struct.Biol., 8, 2001
5G3Q
DownloadVisualize
BU of 5g3q by Molmil
Crystal structure of a hypothetical domain in WNK1
Descriptor: WNK1
Authors:Pinkas, D.M, Bufton, J.C, Sanvitale, C.E, Bartual, S.G, Adamson, R.J, Krojer, T, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
Deposit date:2016-04-29
Release date:2017-05-31
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.613 Å)
Cite:Crystal Structure of a Hypothetical Domain in Wnk1
To be Published
1JOK
DownloadVisualize
BU of 1jok by Molmil
Averaged structure for Staphylococcal nuclease-H124L in ternary complex with Ca2+ and thymidine-3',5'-bisphosphate
Descriptor: THYMIDINE-3',5'-DIPHOSPHATE, staphylococcal nuclease
Authors:Wang, J, Truckses, D.M, Abildgaard, F, Dzakula, Z, Zolnai, Z, Markley, J.L.
Deposit date:2001-07-30
Release date:2001-08-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of staphylococcal nuclease from multidimensional, multinuclear NMR: nuclease-H124L and its ternary complex with Ca2+ and thymidine-3',5'-bisphosphate.
J.Biomol.NMR, 10, 1997
1JOQ
DownloadVisualize
BU of 1joq by Molmil
Ensemble structures for Staphylococcal nuclease-H124L in ternary complex with Ca2+ and thymidine-3',5'-bisphosphate
Descriptor: THYMIDINE-3',5'-DIPHOSPHATE, staphylococcal nuclease
Authors:Wang, J, Truckses, D.M, Abildgaard, F, Dzakula, Z, Zolnai, Z, Markley, J.L.
Deposit date:2001-07-30
Release date:2001-08-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of staphylococcal nuclease from multidimensional, multinuclear NMR: nuclease-H124L and its ternary complex with Ca2+ and thymidine-3',5'-bisphosphate.
J.Biomol.NMR, 10, 1997
1JYT
DownloadVisualize
BU of 1jyt by Molmil
Solution structure of olfactory marker protein from rat
Descriptor: Olfactory Marker Protein
Authors:Baldisseri, D.M, Margolis, J.W, Weber, D.J, Koo, J.H, Margolis, F.M.
Deposit date:2001-09-13
Release date:2001-10-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Olfactory marker protein (OMP) exhibits a beta-clam fold in solution: implications for target peptide interaction and olfactory signal transduction.
J.Mol.Biol., 319, 2002
1K2H
DownloadVisualize
BU of 1k2h by Molmil
Three-dimensional Solution Structure of apo-S100A1.
Descriptor: S-100 protein, alpha chain
Authors:Rustandi, R.R, Baldisseri, D.M, Inman, K.G, Nizner, P, Hamilton, S.M, Landar, A, Landar, A, Zimmer, D.B, Weber, D.J.
Deposit date:2001-09-27
Release date:2002-02-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the calcium-signaling protein apo-S100A1 as determined by NMR.
Biochemistry, 41, 2002
4PPR
DownloadVisualize
BU of 4ppr by Molmil
Crystal structure of Mycobacterium tuberculosis D,D-peptidase Rv3330 in complex with meropenem
Descriptor: (4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid, Penicillin-binding protein DacB1
Authors:Prigozhin, D.M, Huizar, J.P, Mavrici, D, Alber, T, TB Structural Genomics Consortium (TBSGC)
Deposit date:2014-02-27
Release date:2014-11-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Subfamily-specific adaptations in the structures of two penicillin-binding proteins from Mycobacterium tuberculosis.
Plos One, 9, 2014
1ZPG
DownloadVisualize
BU of 1zpg by Molmil
Arginase I covalently modified with propylamine at Q19C
Descriptor: Arginase 1, MANGANESE (II) ION
Authors:Colleluori, D.M, Reczkowski, R.S, Emig, F.A, Cama, E, Cox, J.D, Scolnick, L.R, Compher, K, Jude, K, Han, S, Viola, R.E, Christianson, D.W, Ash, D.E.
Deposit date:2005-05-16
Release date:2005-12-06
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the role of the hyper-reactive histidine residue of arginase.
Arch.Biochem.Biophys., 444, 2005
1YV1
DownloadVisualize
BU of 1yv1 by Molmil
Fully reduced state of nigerythrin (all ferrous)
Descriptor: FE (II) ION, Nigerythrin
Authors:Iyer, R.B, Silaghi-Dumitrescu, R, Kurtz, D.M, Lanzilotta, W.N.
Deposit date:2005-02-14
Release date:2005-06-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution crystal structures of Desulfovibrio vulgaris (Hildenborough) nigerythrin: facile, redox-dependent iron movement, domain interface variability, and peroxidase activity in the rubrerythrins.
J.Biol.Inorg.Chem., 10, 2005
1Z97
DownloadVisualize
BU of 1z97 by Molmil
Human Carbonic Anhydrase III: Structural and Kinetic Study of Catalysis and Proton Transfer.
Descriptor: Carbonic anhydrase III, ZINC ION
Authors:Duda, D.M, Tu, C, Fisher, S.Z, An, H, Yoshioka, C, Govindasamy, L, Laipis, P.J, Agbandje-McKenna, M, Silverman, D.N, McKenna, R.
Deposit date:2005-03-31
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human Carbonic Anhydrase III: Structural and Kinetic Study of Catalysis and Proton Transfer
Biochemistry, 44, 2005
1ZKM
DownloadVisualize
BU of 1zkm by Molmil
Structural Analysis of Escherichia Coli ThiF
Descriptor: Adenylyltransferase thiF, ZINC ION
Authors:Duda, D.M, Walden, H, Sfondouris, J, Schulman, B.A.
Deposit date:2005-05-03
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural Analysis of Escherichia Coli ThiF.
J.Mol.Biol., 349, 2005
1YUZ
DownloadVisualize
BU of 1yuz by Molmil
Partially Reduced State of Nigerythrin
Descriptor: FE (II) ION, FE (III) ION, Nigerythrin
Authors:Iyer, R.B, Silaghi-Dumitrescu, R, Kurtz, D.M, Lanzilotta, W.N.
Deposit date:2005-02-14
Release date:2005-06-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-resolution crystal structures of Desulfovibrio vulgaris (Hildenborough) nigerythrin: facile, redox-dependent iron movement, domain interface variability, and peroxidase activity in the rubrerythrins.
J.Biol.Inorg.Chem., 10, 2005
5IFN
DownloadVisualize
BU of 5ifn by Molmil
Human PSPC1 Homodimer
Descriptor: Paraspeckle component 1
Authors:Knott, G.J, Passon, D.M, Bond, C.S.
Deposit date:2016-02-26
Release date:2017-08-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Human PSPC1 Homodimer
To Be Published
5ING
DownloadVisualize
BU of 5ing by Molmil
A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender unit
Descriptor: Putative carboxyl transferase
Authors:Valentic, T.R, Ray, L, Miyazawa, T, Song, L, Withall, D.M, Milligan, J.C, Takahashi, S, Osada, H, Tsai, S.C, Challis, G.L.
Deposit date:2016-03-07
Release date:2016-12-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender units.
Nat Commun, 7, 2016
1ZLJ
DownloadVisualize
BU of 1zlj by Molmil
Crystal Structure of the Mycobacterium tuberculosis Hypoxic Response Regulator DosR C-terminal Domain
Descriptor: Dormancy Survival Regulator
Authors:Wisedchaisri, G, Wu, M, Rice, A.E, Roberts, D.M, Sherman, D.R, Hol, W.G.J.
Deposit date:2005-05-06
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Mycobacterium tuberculosis DosR and DosR-DNA complex involved in gene activation during adaptation to hypoxic latency.
J.Mol.Biol., 354, 2005
1Z93
DownloadVisualize
BU of 1z93 by Molmil
Human Carbonic Anhydrase III:Structural and Kinetic study of Catalysis and Proton Transfer.
Descriptor: Carbonic anhydrase III, ZINC ION
Authors:Duda, D.M, Tu, C, Fisher, S.Z, An, H, Yoshioka, C, Govindasamy, L, Laipis, P.J, Agbandje-McKenna, M, Silverman, D.N, McKenna, R.
Deposit date:2005-03-31
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human Carbonic Anhydrase III: Structural and Kinetic Study of Catalysis and Proton Transfer
Biochemistry, 44, 2005

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon