Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1951 results

2J45
DownloadVisualize
BU of 2j45 by Molmil
Water structure of T. Aquaticus Ffh NG Domain At 1.1A Resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Freymann, D.M, Ramirez, U.D.
Deposit date:2006-08-24
Release date:2006-11-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Analysis of Protein Hydration in Ultra-High Resolution Structures of the Srp Gtpase Ffh
Acta Crystallogr.,Sect.D, 62, 2006
2J46
DownloadVisualize
BU of 2j46 by Molmil
Water structure of T. Aquaticus Ffh NG Domain At 1.1A Resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Freymann, D.M, Ramirez, U.D.
Deposit date:2006-08-24
Release date:2006-11-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Analysis of Protein Hydration in Ultra-High Resolution Structures of the Srp Gtpase Ffh
Acta Crystallogr.,Sect.D, 62, 2006
2WMC
DownloadVisualize
BU of 2wmc by Molmil
Crystal structure of eukaryotic initiation factor 4E from Pisum sativum
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, EUKARYOTIC TRANSLATION INITIATION FACTOR 4E
Authors:Ashby, J.A, Stevenson, C.E.M, Maule, A.J, Lawson, D.M.
Deposit date:2009-06-30
Release date:2010-09-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-Based Mutational Analysis of Eif4E in Relation to Sbm1 Resistance to Pea Seed-Borne Mosaic Virus in Pea.
Plos One, 6, 2011
2HLD
DownloadVisualize
BU of 2hld by Molmil
Crystal structure of yeast mitochondrial F1-ATPase
Descriptor: ATP synthase alpha chain, mitochondrial, ATP synthase beta chain, ...
Authors:Kabaleeswaran, V, Puri, N, Walker, J.E, Leslie, A.G, Mueller, D.M.
Deposit date:2006-07-06
Release date:2006-11-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Novel features of the rotary catalytic mechanism revealed in the structure of yeast F(1) ATPase.
Embo J., 25, 2006
1GPF
DownloadVisualize
BU of 1gpf by Molmil
CHITINASE B FROM SERRATIA MARCESCENS IN COMPLEX WITH INHIBITOR PSAMMAPLIN
Descriptor: CHITINASE B, SULFATE ION
Authors:Komander, D, Van Aalten, D.M.
Deposit date:2001-11-03
Release date:2002-10-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Psammaplin A, a Chitinase Inhibitor Isolated from the Fijian Marine Sponge Aplysinella Rhax
Bioorg.Med.Chem., 10, 2002
3D9E
DownloadVisualize
BU of 3d9e by Molmil
Nitroalkane oxidase: active site mutant D402N crystallized with 1-nitrooctane
Descriptor: 1-nitrooctane, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Heroux, A, Bozinovski, D.M, Valley, M.P, Fitzpatrick, P.F, Orville, A.M.
Deposit date:2008-05-27
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of intermediates in the nitroalkane oxidase reaction.
Biochemistry, 48, 2009
3COX
DownloadVisualize
BU of 3cox by Molmil
CRYSTAL STRUCTURE OF CHOLESTEROL OXIDASE COMPLEXED WITH A STEROID SUBSTRATE. IMPLICATIONS FOR FAD DEPENDENT ALCOHOL OXIDASES
Descriptor: CHOLESTEROL OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Vrielink, A, Li, J, Brick, P, Blow, D.M.
Deposit date:1993-06-14
Release date:1993-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of cholesterol oxidase complexed with a steroid substrate: implications for flavin adenine dinucleotide dependent alcohol oxidases.
Biochemistry, 32, 1993
6GJ5
DownloadVisualize
BU of 6gj5 by Molmil
CRYSTAL STRUCTURE OF KRAS G12D (GPPCP) IN COMPLEX WITH 15
Descriptor: (3~{S})-3-[2-[(2~{R})-pyrrolidin-2-yl]-1~{H}-indol-3-yl]-2,3-dihydroisoindol-1-one, GTPase KRas, MAGNESIUM ION, ...
Authors:Kessler, D, Mcconnell, D.M, Mantoulidis, A.
Deposit date:2018-05-16
Release date:2019-07-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Drugging an undruggable pocket on KRAS.
Proc.Natl.Acad.Sci.USA, 116, 2019
6D71
DownloadVisualize
BU of 6d71 by Molmil
Crystal Structure of the Human Miro1 N-terminal GTPase bound to GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mitochondrial Rho GTPase 1
Authors:Smith, K.P, Focia, P.J, Rice, S.E, Freymann, D.M.
Deposit date:2018-04-23
Release date:2019-10-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7180779 Å)
Cite:Insight into human Miro1/2 domain organization based on the structure of its N-terminal GTPase.
J.Struct.Biol., 212, 2020
6GJ7
DownloadVisualize
BU of 6gj7 by Molmil
CRYSTAL STRUCTURE OF KRAS G12D (GPPCP) IN COMPLEX WITH 22
Descriptor: (3~{S})-5-oxidanyl-3-[2-[[[1-(phenylmethyl)indol-6-yl]methylamino]methyl]-1~{H}-indol-3-yl]-2,3-dihydroisoindol-1-one, GTPase KRas, MAGNESIUM ION, ...
Authors:Kessler, D, Mcconnell, D.M, Mantoulidis, A.
Deposit date:2018-05-16
Release date:2019-07-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Drugging an undruggable pocket on KRAS.
Proc.Natl.Acad.Sci.USA, 116, 2019
6GJ6
DownloadVisualize
BU of 6gj6 by Molmil
CRYSTAL STRUCTURE OF KRAS G12D (GPPCP) IN COMPLEX WITH 18
Descriptor: (3~{S})-3-[2-[(dimethylamino)methyl]-1~{H}-indol-3-yl]-5-oxidanyl-2,3-dihydroisoindol-1-one, GTPase KRas, MAGNESIUM ION, ...
Authors:Kessler, D, Mcconnell, D.M, Mantoulidis, A, Phan, J.
Deposit date:2018-05-16
Release date:2019-07-31
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.761 Å)
Cite:Drugging an undruggable pocket on KRAS.
Proc.Natl.Acad.Sci.USA, 116, 2019
6GJ8
DownloadVisualize
BU of 6gj8 by Molmil
CRYSTAL STRUCTURE OF KRAS G12D (GPPCP) IN COMPLEX WITH BI 2852
Descriptor: (3~{S})-3-[2-[[[1-[(1-methylimidazol-4-yl)methyl]indol-6-yl]methylamino]methyl]-1~{H}-indol-3-yl]-5-oxidanyl-2,3-dihydroisoindol-1-one, GTPase KRas, MAGNESIUM ION, ...
Authors:Kessler, D, Mcconnell, D.M, Mantoulidis, A.
Deposit date:2018-05-16
Release date:2019-07-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Drugging an undruggable pocket on KRAS.
Proc.Natl.Acad.Sci.USA, 116, 2019
3D9D
DownloadVisualize
BU of 3d9d by Molmil
Nitroalkane oxidase: mutant D402N crystallized with 1-nitrohexane
Descriptor: 1-nitrohexane, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Heroux, A, Bozinovski, D.M, Valley, M.P, Fitzpatrick, P.F, Orville, A.M.
Deposit date:2008-05-27
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of intermediates in the nitroalkane oxidase reaction.
Biochemistry, 48, 2009
3D9G
DownloadVisualize
BU of 3d9g by Molmil
Nitroalkane oxidase: wild type crystallized in a trapped state forming a cyanoadduct with FAD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Nitroalkane oxidase, ...
Authors:Heroux, A, Bozinovski, D.M, Valley, M.P, Fitzpatrick, P.F, Orville, A.M.
Deposit date:2008-05-27
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of intermediates in the nitroalkane oxidase reaction.
Biochemistry, 48, 2009
3D9F
DownloadVisualize
BU of 3d9f by Molmil
Nitroalkane oxidase: active site mutant S276A crystallized with 1-nitrohexane
Descriptor: 1-nitrohexane, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Heroux, A, Bozinovski, D.M, Valley, M.P, Fitzpatrick, P.F, Orville, A.M.
Deposit date:2008-05-27
Release date:2009-04-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of intermediates in the nitroalkane oxidase reaction.
Biochemistry, 48, 2009
1RYT
DownloadVisualize
BU of 1ryt by Molmil
RUBRERYTHRIN
Descriptor: FE (III) ION, RUBRERYTHRIN
Authors:Demare, F, Kurtz, D.M, Nordlund, P.
Deposit date:1996-04-26
Release date:1997-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of Desulfovibrio vulgaris rubrerythrin reveals a unique combination of rubredoxin-like FeS4 and ferritin-like diiron domains.
Nat.Struct.Biol., 3, 1996
4V0P
DownloadVisualize
BU of 4v0p by Molmil
Crystal structure of the MAGE homology domain of human MAGE-A3
Descriptor: MELANOMA-ASSOCIATED ANTIGEN 3
Authors:Newman, J.A, Aitkenhead, H, Cooper, C.D.O, Pinkas, D.M, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2014-09-17
Release date:2014-10-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structures of Two Melanoma-Associated Antigens Suggest Allosteric Regulation of Effector Binding.
Plos One, 11, 2016
4YPI
DownloadVisualize
BU of 4ypi by Molmil
Structure of Ebola virus nucleoprotein N-terminal fragment bound to a peptide derived from Ebola VP35
Descriptor: Nucleoprotein, Polymerase cofactor VP35
Authors:Leung, D.W, Borek, D.M, Binning, J.M, Otwinowski, Z, Amarasinghe, G.K, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-03-13
Release date:2015-04-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.71 Å)
Cite:An Intrinsically Disordered Peptide from Ebola Virus VP35 Controls Viral RNA Synthesis by Modulating Nucleoprotein-RNA Interactions.
Cell Rep, 11, 2015
2C04
DownloadVisualize
BU of 2c04 by Molmil
GMPPCP complex of SRP GTPase Ffh NG Domain at ultra-high resolution
Descriptor: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, SIGNAL RECOGNITION PARTICLE PROTEIN
Authors:Ramirez, U.D, Preininger, A.M, Freymann, D.M.
Deposit date:2005-08-25
Release date:2007-02-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Nucleotide-Binding Flexibility in Ultrahigh-Resolution Structures of the Srp Gtpase Ffh
Acta Crystallogr.,Sect.D, 64, 2008
5MY3
DownloadVisualize
BU of 5my3 by Molmil
Crystal structure of the RhoGAP domain of Rgd1p at 2.19 Angstroms resolution
Descriptor: RHO GTPase-activating protein RGD1
Authors:Martinez, D.M, d'Estaintot, B.L, Granier, T, Hugues, M, Odaert, B, Gallois, B, Doignon, F.
Deposit date:2017-01-25
Release date:2018-01-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural evidence of a phosphoinositide-binding site in the Rgd1-RhoGAP domain.
Biochem. J., 474, 2017
2BJ2
DownloadVisualize
BU of 2bj2 by Molmil
RNA LOOP-LOOP COMPLEX: THE COLE1 INVERTED LOOP SEQUENCE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: RNA (5'-R(*GP*CP*AP*CP*CP*GP*AP*AP*CP*CP*AP*UP*CP*CP*GP*GP*UP*GP*C)-3'), RNA (5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*AP*UP*GP*GP*UP*UP*CP*GP*UP*UP*GP*CP*C)-3')
Authors:Lee, A.J, Crothers, D.M.
Deposit date:1998-07-02
Release date:1999-02-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of an RNA loop-loop complex: the ColE1 inverted loop sequence.
Structure, 6, 1998
2C03
DownloadVisualize
BU of 2c03 by Molmil
GDP COMPLEX OF SRP GTPASE FFH NG DOMAIN
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Ramirez, U.D, Preininger, A.M, Freymann, D.M.
Deposit date:2005-08-25
Release date:2007-02-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Nucleotide-Binding Flexibility in Ultrahigh-Resolution Structures of the Srp Gtpase Ffh
Acta Crystallogr.,Sect.D, 64, 2008
5NKS
DownloadVisualize
BU of 5nks by Molmil
Human Dihydropyrimidinase-related Protein 4 (DPYSL4, CRMP3, ULIP-4)
Descriptor: Dihydropyrimidinase-related protein 4
Authors:Mathea, S, Elkins, J.M, Strain-Damerell, C, Salah, E, Borkowska, O, Chalk, R, Burgess-Brown, N, Pinkas, D.M, von Delft, F, Krojer, T, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S.
Deposit date:2017-03-31
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Human Dihydropyrimidinase-related Protein 4 (DPYSL4, CRMP3, ULIP-4)
To Be Published
2C52
DownloadVisualize
BU of 2c52 by Molmil
Structural diversity in CBP p160 complexes
Descriptor: CREB-BINDING PROTEIN, NUCLEAR RECEPTOR COACTIVATOR 1
Authors:Waters, L.C, Yue, B, Veverka, V, Renshaw, P.S, Bramham, J, Matsuda, S, Frenkiel, T, Kelly, G, Muskett, F.W, Carr, M.D, Heery, D.M.
Deposit date:2005-10-25
Release date:2006-03-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural diversity in p160/CREB-binding protein coactivator complexes.
J. Biol. Chem., 281, 2006
2CB8
DownloadVisualize
BU of 2cb8 by Molmil
High resolution crystal structure of liganded human L-ACBP
Descriptor: 2-METHOXYETHANOL, ACYL-COA-BINDING PROTEIN, SULFATE ION, ...
Authors:Taskinen, J.P, van Aalten, D.M, Knudsen, J, Wierenga, R.K.
Deposit date:2006-01-03
Release date:2006-10-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High Resolution Crystal Structures of Unliganded and Liganded Human Liver Acbp Reveal a New Mode of Binding for the Acyl-Coa Ligand.
Proteins: Struct., Funct., Bioinf., 66, 2007

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon