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PDB: 998 件

8K55
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Crystal structure of sulfur transferase from Frondihabitans sp. PAMC28461 crystallized in the P1 space group
分子名称: sulfur transferase
著者Nguyen, D.L, Do, H.
登録日2023-07-21
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional characterization of sulfurtransferase from Frondihabitans sp. PAMC28461.
Plos One, 19, 2024
1QOR
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BU of 1qor by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI QUINONE OXIDOREDUCTASE COMPLEXED WITH NADPH
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, QUINONE OXIDOREDUCTASE, SULFATE ION
著者Thorn, J.M, Barton, J.D, Dixon, N.E, Ollis, D.L, Edwards, K.J.
登録日1995-02-14
公開日1995-06-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Escherichia coli QOR quinone oxidoreductase complexed with NADPH.
J.Mol.Biol., 249, 1995
6U4S
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wild type cysteine dioxygenase
分子名称: Cysteine dioxygenase type 1, FE (III) ION
著者Meneely, K.M, Chilton, A.S, Forbes, D.L, Ellis, H.R, Lamb, A.L.
登録日2019-08-26
公開日2020-07-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The 3-His Metal Coordination Site Promotes the Coupling of Oxygen Activation to Cysteine Oxidation in Cysteine Dioxygenase.
Biochemistry, 59, 2020
6U9E
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Structure of PdpA-VgrG Complex, Lidless
分子名称: PdpA, VgrG
著者Yang, X, Clemens, D.L, Lee, B.-Y, Cui, Y, Zhou, Z.H, Horwitz, M.A.
登録日2019-09-08
公開日2019-10-23
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.21 Å)
主引用文献Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique alpha-Helical Lid and a Putative Cargo.
Structure, 27, 2019
4MLM
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BU of 4mlm by Molmil
Crystal Structure of PhnZ from uncultured bacterium HF130_AEPn_1
分子名称: FE (III) ION, GLYCEROL, L(+)-TARTARIC ACID, ...
著者van Staalduinen, L.M, McSorley, F.R, Zechel, D.L, Jia, Z, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2013-09-06
公開日2014-04-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of PhnZ in complex with substrate reveals a di-iron oxygenase mechanism for catabolism of organophosphonates.
Proc.Natl.Acad.Sci.USA, 111, 2014
8K57
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Crystal structure of sulfur transferase from Frondihabitans sp. PAMC28461 crystallized in the I21 space group
分子名称: sulfur transferase
著者Nguyen, D.L, Do, H.
登録日2023-07-21
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structural and functional characterization of sulfurtransferase from Frondihabitans sp. PAMC28461.
Plos One, 19, 2024
6PD2
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PntC-AEPT: fusion protein of phosphonate-specific cytidylyltransferase and 2-aminoethylphosphonate (AEP) transaminase from Treponema denticola in complex with cytidine monophosphate-AEP
分子名称: 1,2-ETHANEDIOL, 5'-O-[(S)-{[(R)-(2-aminoethyl)(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]cytidine, ACETATE ION, ...
著者Suits, M.D.L, Whiteside, J.
登録日2019-06-18
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The predominance of nucleotidyl activation in bacterial phosphonate biosynthesis.
Nat Commun, 10, 2019
1QYD
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Crystal structures of pinoresinol-lariciresinol and phenylcoumaran benzylic ether reductases, and their relationship to isoflavone reductases
分子名称: pinoresinol-lariciresinol reductase
著者Min, T, Kasahara, H, Bedgar, D.L, Youn, B, Lawrence, P.K, Gang, D.R, Halls, S.C, Park, H, Hilsenbeck, J.L, Davin, L.B, Kang, C.
登録日2003-09-10
公開日2003-11-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of pinoresinol-lariciresinol and phenylcoumaran benzylic ether reductases and their relationship to isoflavone reductases.
J.Biol.Chem., 278, 2003
6U4L
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cysteine dioxygenase variant - C93E
分子名称: ACETATE ION, Cysteine dioxygenase type 1, FE (III) ION
著者Meneely, K.M, Chilton, A.S, Forbes, D.L, Ellis, H.R, Lamb, A.L.
登録日2019-08-26
公開日2020-07-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.911 Å)
主引用文献The 3-His Metal Coordination Site Promotes the Coupling of Oxygen Activation to Cysteine Oxidation in Cysteine Dioxygenase.
Biochemistry, 59, 2020
6U9G
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Structure of Francisella PdpA-VgrG Complex, half-lidded
分子名称: PdpA, VgrG
著者Yang, X, Clemens, D.L, Lee, B.-Y, Cui, Y, Zhou, Z.H, Horwitz, M.A.
登録日2019-09-08
公開日2019-10-23
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.98 Å)
主引用文献Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique alpha-Helical Lid and a Putative Cargo.
Structure, 27, 2019
1QY7
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The structure of the PII protein from the cyanobacteria Synechococcus sp. PCC 7942
分子名称: NICKEL (II) ION, Nitrogen regulatory protein P-II, SULFATE ION
著者Xu, Y, Carr, P.D, Clancy, P, Garcia-Dominguez, M, Forchhammer, K, Florencio, F, Tandeau de Marsac, N, Vasudevan, S.G, Ollis, D.L.
登録日2003-09-09
公開日2003-09-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structures of the PII proteins from the cyanobacteria Synechococcus sp. PCC 7942 and Synechocystis sp. PCC 6803.
Acta Crystallogr.,Sect.D, 59, 2003
4MLN
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BU of 4mln by Molmil
Crystal of PhnZ bound to (R)-2-amino-1-hydroxyethylphosphonic acid
分子名称: FE (III) ION, Predicted HD phosphohydrolase PhnZ, [(1R)-2-amino-1-hydroxyethyl]phosphonic acid
著者van Staalduinen, L.M, McSorley, F.R, Zechel, D.L, Jia, Z, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2013-09-06
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of PhnZ in complex with substrate reveals a di-iron oxygenase mechanism for catabolism of organophosphonates.
Proc.Natl.Acad.Sci.USA, 111, 2014
6PD1
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PntC-AEPT: fusion protein of phosphonate-specific cytidylyltransferase and 2-aminoethylphosphonate (AEP) transaminase from Treponema denticola
分子名称: 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ...
著者Suits, M.D.L, Whiteside, J.
登録日2019-06-18
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献The predominance of nucleotidyl activation in bacterial phosphonate biosynthesis.
Nat Commun, 10, 2019
4N1A
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BU of 4n1a by Molmil
Thermomonospora curvata EccC (ATPases 2 and 3) in complex with a signal sequence peptide
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell divisionFtsK/SpoIIIE, MAGNESIUM ION, ...
著者Dovala, D.L, Bendebury, A, Cox, J.S, Stroud, R.M, Rosenberg, O.S.
登録日2013-10-03
公開日2015-02-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Substrates Control Multimerization and Activation of the Multi-Domain ATPase Motor of Type VII Secretion.
Cell(Cambridge,Mass.), 161, 2015
6U9F
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Structure of Francisella PdpA-VgrG Complex, Lidded
分子名称: PdpA, VgrG
著者Yang, X, Clemens, D.L, Lee, B.-Y, Cui, Y.X, Horwitz, M.A, Zhou, Z.H.
登録日2019-09-08
公開日2019-10-23
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.35 Å)
主引用文献Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique alpha-Helical Lid and a Putative Cargo.
Structure, 27, 2019
6PF6
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BU of 6pf6 by Molmil
Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and 2-(4-((2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl)benzamido)terephthalic acid
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-({4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)benzene-1,4-dicarboxylic acid, Thymidylate synthase,Thymidylate synthase
著者Czyzyk, D.L, Valhondo, M, Jorgensen, W.L, Anderson, K.S.
登録日2019-06-21
公開日2019-10-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structure activity relationship towards design of cryptosporidium specific thymidylate synthase inhibitors.
Eur.J.Med.Chem., 183, 2019
6P9Z
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Staphylococcus aureus Dihydrofolate reductase in complex with NADPH and Methotrexate
分子名称: Dihydrofolate reductase, GLYCEROL, METHOTREXATE, ...
著者Reeve, S.M, Wright, D.L.
登録日2019-06-10
公開日2019-10-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Toward Broad Spectrum Dihydrofolate Reductase Inhibitors Targeting Trimethoprim Resistant Enzymes Identified in Clinical Isolates of Methicillin ResistantStaphylococcus aureus.
Acs Infect Dis., 5, 2019
6U4V
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Non-crosslinked wild type cysteine dioxygenase
分子名称: Cysteine dioxygenase type 1, FE (III) ION
著者Meneely, K.M, Chilton, A.S, Forbes, D.L, Ellis, H.R, Lamb, A.L.
登録日2019-08-26
公開日2020-07-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The 3-His Metal Coordination Site Promotes the Coupling of Oxygen Activation to Cysteine Oxidation in Cysteine Dioxygenase.
Biochemistry, 59, 2020
1K4J
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Crystal Structure of the Acyl-homoserinelactone Synthase EsaI Complexed with Rhenate
分子名称: PERRHENATE, acyl-homoserinelactone synthase EsaI
著者Watson, W.T, Minogue, T.D, Val, D.L, Beck von Bodman, S, Churchill, M.E.A.
登録日2001-10-08
公開日2002-04-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis and specificity of acyl-homoserine lactone signal production in bacterial quorum sensing.
Mol.Cell, 9, 2002
6OQO
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BU of 6oqo by Molmil
CDK6 in complex with Cpd24 N-(5-(6-ethyl-2,6-diazaspiro[3.3]heptan-2-yl)pyridin-2-yl)-5-fluoro-4-(4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl)pyrimidin-2-amine
分子名称: Cyclin-dependent kinase 6, N-[5-(6-ethyl-2,6-diazaspiro[3.3]heptan-2-yl)pyridin-2-yl]-5-fluoro-4-[(4R)-4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl]pyrimidin-2-amine
著者Murray, J.M, Boenig, G.D.L.
登録日2019-04-26
公開日2020-07-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.977 Å)
主引用文献Design of a brain-penetrant CDK4/6 inhibitor for glioblastoma.
Bioorg.Med.Chem.Lett., 29, 2019
8OHN
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Human Coronavirus HKU1 spike glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Pronker, M.F, Hurdiss, D.L.
登録日2023-03-21
公開日2023-08-02
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023
8OPN
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Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (1-up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-8)-N-acetyl-alpha-neuraminic acid, ...
著者Pronker, M.F, Creutznacher, R, Hurdiss, D.L.
登録日2023-04-07
公開日2023-08-02
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023
8OPO
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Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (3-up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-8)-N-acetyl-alpha-neuraminic acid, ...
著者Pronker, M.F, Creutznacher, R, Hurdiss, D.L.
登録日2023-04-07
公開日2023-08-02
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023
8OPM
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Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (closed state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-8)-N-acetyl-alpha-neuraminic acid, ...
著者Pronker, M.F, Creutznacher, R, Hurdiss, D.L.
登録日2023-04-07
公開日2023-08-02
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023
1KZF
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Crystal Structure of the Acyl-homoserine Lactone Synthase, EsaI
分子名称: acyl-homoserinelactone synthase EsaI
著者Watson, W.T, Minogue, T.D, Val, D.L, Beck von Bodman, S, Churchill, M.E.A.
登録日2002-02-06
公開日2002-04-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis and specificity of acyl-homoserine lactone signal production in bacterial quorum sensing.
Mol.Cell, 9, 2002

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