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PDB: 2998 results

8C6D
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Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate.
Descriptor: (2S,3R,4E)-2-aminooctadec-4-ene-1,3-diol, Genome polyprotein, Genome polyprotein (Fragment)
Authors:Kingston, N.J, Snowden, J.S, Stonehouse, N.J, Rowlands, D.J, Hogle, J.M.
Deposit date:2023-01-11
Release date:2023-02-22
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate.
Biorxiv, 2023
1W9U
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BU of 1w9u by Molmil
Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against Aspergillus fumigatus chitinase
Descriptor: ARGADIN, CHITINASE, SULFATE ION
Authors:Rao, F.V, Houston, D.R, Boot, R.G, Aerts, J.M.F.G, Hodkinson, M, Adams, D.J, Shiomi, K, Omura, S, van Aalten, D.M.F.
Deposit date:2004-10-19
Release date:2004-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Specificity and Affinity of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human and Bacterial Chitinases
Chem.Biol., 12, 2005
1WN8
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NMR Structure of OaNTR
Descriptor: Kalata B3/B6
Authors:Dutton, J.L, Renda, R.F, Waine, C, Clark, R.J, Daly, N.L, Jennings, C.V, Anderson, M.A, Craik, D.J.
Deposit date:2004-07-28
Release date:2004-09-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Conserved structural and sequence elements implicated in the processing of gene-encoded circular proteins
J.Biol.Chem., 279, 2004
1WOP
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BU of 1wop by Molmil
Crystal Structure of T-protein of the Glycine Cleavage System
Descriptor: Aminomethyltransferase, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid
Authors:Lee, H.H, Kim, D.J, Ahn, H.J, Ha, J.Y, Suh, S.W.
Deposit date:2004-08-24
Release date:2004-09-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of T-protein of the Glycine Cleavage System: Cofactor binding, insights into H-protein recognition, and molecular basis for understanding nonketotic hyperglycinemia
J.Biol.Chem., 279, 2004
1WLG
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BU of 1wlg by Molmil
Crystal structure of FlgE31, a major fragment of the hook protein
Descriptor: Flagellar hook protein flgE
Authors:Samatey, F.A, Matsunami, H, Imada, K, Nagashima, S, Shaikh, T.R, Thomas, D.R, DeRosier, D.J, Kitao, A, Namba, K.
Deposit date:2004-06-25
Release date:2004-11-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the bacterial flagellar hook and implication for the molecular universal joint mechanism.
Nature, 431, 2004
5M7U
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Structure of human O-GlcNAc hydrolase with new iminocyclitol type inhibitor
Descriptor: 2-[(2~{R},3~{S},4~{R},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)-1-[3-[3-(trifluoromethyl)phenyl]propyl]pyrrolidin-2-yl]-~{N}-methyl-ethanamide, Protein O-GlcNAcase
Authors:Roth, C, Chan, S, Offen, W.A, Hemsworth, G.R, Willems, L.I, King, D, Varghese, V, Britton, R, Vocadlo, D.J, Davies, G.J.
Deposit date:2016-10-28
Release date:2017-03-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional insight into human O-GlcNAcase.
Nat. Chem. Biol., 13, 2017
5MBT
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CeuE (H227L, Y288F variant) a periplasmic protein from Campylobacter jejuni
Descriptor: Enterochelin uptake periplasmic binding protein
Authors:Wilde, E.J, Blagova, E.V, Hughes, A, Raines, D.J, Moroz, O.V, Turkenburg, J.P, Duhme-Klair, A.-K, Wilson, K.S.
Deposit date:2016-11-08
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
5MEK
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BU of 5mek by Molmil
Sulphotransferase-18 from Arabidopsis thaliana in complex with 3'-phosphoadenosine 5'-phosphate (PAP)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-3'-5'-DIPHOSPHATE, Cytosolic sulfotransferase 18, ...
Authors:Hirschmann, F, Krause, F, Baruch, P, Chizhov, I, Mueller, J.W, Manstein, D.J, Papenbrock, J, Fedorov, R.
Deposit date:2016-11-15
Release date:2017-07-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural and biochemical studies of sulphotransferase 18 from Arabidopsis thaliana explain its substrate specificity and reaction mechanism.
Sci Rep, 7, 2017
1W9P
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Specificity and affinity of natural product cyclopentapeptide inhibitors against Aspergillus fumigatus, human and bacterial chitinaseFra
Descriptor: CHITINASE, SULFATE ION
Authors:Rao, F.V, Houston, D.R, Boot, R.G, Aerts, J.M.F.G, Hodkinson, M, Adams, D.J, Shiomi, K, Omura, S, Van Aalten, D.M.F.
Deposit date:2004-10-15
Release date:2004-10-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Specificity and Affinity of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human and Bacterial Chitinases
Chem.Biol., 12, 2005
1WB0
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BU of 1wb0 by Molmil
specificity and affinity of natural product cyclopentapeptide inhibitor Argifin against human chitinase
Descriptor: ARGIFIN, CHITOTRIOSIDASE 1, GLYCEROL, ...
Authors:Rao, F.V, Houston, D.R, Boot, R.G, Aerts, J.M.F.G, Hodkinson, M, Adams, D.J, Shiomi, K, Omura, S, Van Aalten, D.M.F.
Deposit date:2004-10-29
Release date:2005-01-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Specificity and Affinity of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human and Bacterial Chitinases
Chem.Biol., 12, 2005
1VHH
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BU of 1vhh by Molmil
A POTENTIAL CATALYTIC SITE WITHIN THE AMINO-TERMINAL SIGNALLING DOMAIN OF SONIC HEDGEHOG
Descriptor: SONIC HEDGEHOG, SULFATE ION, ZINC ION
Authors:Hall, T.M.T, Porter, J.A, Beachy, P.A, Leahy, D.J.
Deposit date:1995-10-03
Release date:1996-01-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A potential catalytic site revealed by the 1.7-A crystal structure of the amino-terminal signalling domain of Sonic hedgehog.
Nature, 378, 1995
5LUF
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BU of 5luf by Molmil
Cryo-EM of bovine respirasome
Descriptor: COPPER (II) ION, Cytochrome b, Cytochrome b-c1 complex subunit 1, ...
Authors:Sousa, J.S, Mills, D.J, Vonck, J, Kuehlbrandt, W.
Deposit date:2016-09-08
Release date:2016-11-30
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:Functional asymmetry and electron flow in the bovine respirasome.
Elife, 5, 2016
1UOV
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BU of 1uov by Molmil
Calcium binding domain C2B
Descriptor: CALCIUM ION, GLYCEROL, SYNAPTOTAGMIN I
Authors:Cheng, Y, Sequeira, S.M, Sollner, T.H, Patel, D.J.
Deposit date:2003-09-24
Release date:2004-09-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystallographic Identification of Ca2+ and Sr2+ Coordination Sites in Synaptotagmin I C2B Domain
Protein Sci., 13, 2004
1WOS
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BU of 1wos by Molmil
Crystal Structure of T-protein of the Glycine Cleavage System
Descriptor: Aminomethyltransferase
Authors:Lee, H.H, Kim, D.J, Ahn, H.J, Ha, J.Y, Suh, S.W.
Deposit date:2004-08-24
Release date:2004-09-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal Structure of T-protein of the Glycine Cleavage System: Cofactor binding, insights into H-protein recognition, and molecular basis for understanding nonketotic hyperglycinemia
J.Biol.Chem., 279, 2004
5MY1
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BU of 5my1 by Molmil
E. coli expressome
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Kohler, R, Mooney, R.A, Mills, D.J, Kostrewa, D, Landick, R, Cramer, P.
Deposit date:2017-01-25
Release date:2017-04-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Architecture of a transcribing-translating expressome.
Science, 356, 2017
1UPN
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BU of 1upn by Molmil
COMPLEX OF ECHOVIRUS TYPE 12 WITH DOMAINS 3 AND 4 OF ITS RECEPTOR DECAY ACCELERATING FACTOR (CD55) BY CRYO ELECTRON MICROSCOPY AT 16 A
Descriptor: COMPLEMENT DECAY-ACCELERATING FACTOR, ECHOVIRUS 11 COAT PROTEIN VP1, ECHOVIRUS 11 COAT PROTEIN VP2, ...
Authors:Bhella, D, Goodfellow, I.G, Roversi, P, Pettigrew, D, Chaudry, Y, Evans, D.J, Lea, S.M.
Deposit date:2003-10-08
Release date:2004-01-07
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (16 Å)
Cite:The Structure of Echovirus Type 12 Bound to a Two-Domain Fragment of its Cellular Attachment Protein Decay-Accelerating Factor (Cd 55)
J.Biol.Chem., 279, 2004
1ULL
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BU of 1ull by Molmil
RNA APTAMER COMPLEXED WITH HIV-1 REV PEPTIDE, NMR, 7 STRUCTURES
Descriptor: REV PEPTIDE, RNA (5'-R (GP*GP*CP*UP*GP*GP*AP*CP*UP*CP*GP*UP*AP*CP*UP*UP*CP*GP* GP*UP*AP*CP*UP*GP*GP*AP*GP*AP*AP*AP*CP*AP*GP*CP*C)-3')
Authors:Ye, X, Gorin, A, Ellington, A.D, Patel, D.J.
Deposit date:1996-11-05
Release date:1997-08-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Deep penetration of an alpha-helix into a widened RNA major groove in the HIV-1 rev peptide-RNA aptamer complex.
Nat.Struct.Biol., 3, 1996
1UOW
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BU of 1uow by Molmil
Calcium binding domain C2B
Descriptor: ACETATE ION, CALCIUM ION, GLYCEROL, ...
Authors:Cheng, Y, Sequeira, S.M, Sollner, T.H, Patel, D.J.
Deposit date:2003-09-24
Release date:2004-09-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Crystallographic Identification of Ca2+ and Sr2+ Coordination Sites in Synaptotagmin I C2B Domain
Protein Sci., 13, 2004
5N9Y
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BU of 5n9y by Molmil
The full-length structure of ZntB
Descriptor: Zinc transport protein ZntB
Authors:Cornelius, G, Stetsenko, A, Scheres, S.H.W, Slotboom, D.J, Guskov, A.
Deposit date:2017-02-27
Release date:2017-11-15
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The structural basis of proton driven zinc transport by ZntB.
Nat Commun, 8, 2017
1WOO
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BU of 1woo by Molmil
Crystal structure of T-protein of the Glycine Cleavage System
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, Aminomethyltransferase
Authors:Lee, H.H, Kim, D.J, Ahn, H.J, Ha, J.Y, Suh, S.W.
Deposit date:2004-08-24
Release date:2004-09-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of T-protein of the Glycine Cleavage System: Cofactor binding, insights into H-protein recognition, and molecular basis for understanding nonketotic hyperglycinemia
J.Biol.Chem., 279, 2004
1UMP
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BU of 1ump by Molmil
GEOMETRY OF TRITERPENE CONVERSION TO PENTACARBOCYCLIC HOPENE
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-AZASQUALENE, SQUALENE--HOPENE CYCLASE
Authors:Reinert, D.J, Balliano, G, Schulz, G.E.
Deposit date:2003-08-27
Release date:2004-02-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Conversion of Squalene to the Pentacarbocyclic Hopene
Chem.Biol., 11, 2004
1UTC
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BU of 1utc by Molmil
Clathrin terminal domain complexed with TLPWDLWTT
Descriptor: AMPHIPHYSIN, CLATHRIN HEAVY CHAIN
Authors:Miele, A.E, Evans, P.R, Owen, D.J.
Deposit date:2003-12-08
Release date:2004-02-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Two distinct interaction motifs in amphiphysin bind two independent sites on the clathrin terminal domain beta-propeller.
Nat. Struct. Mol. Biol., 11, 2004
1TOB
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BU of 1tob by Molmil
SACCHARIDE-RNA RECOGNITION IN AN AMINOGLYCOSIDE ANTIBIOTIC-RNA APTAMER COMPLEX, NMR, 7 STRUCTURES
Descriptor: 1,3-DIAMINO-5,6-DIHYDROXYCYCLOHEXANE, 2,6-diammonio-2,3,6-trideoxy-alpha-D-glucopyranose, 3-ammonio-3-deoxy-alpha-D-glucopyranose, ...
Authors:Jiang, L, Suri, A.K, Fiala, R, Patel, D.J.
Deposit date:1996-12-12
Release date:1997-06-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Saccharide-RNA recognition in an aminoglycoside antibiotic-RNA aptamer complex.
Chem.Biol., 4, 1997
1TS9
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BU of 1ts9 by Molmil
Crystal Structure of the Archaeal Homolog of Human RNase P Protein Rpp29 from Archaeoglobus fulgidus
Descriptor: Ribonuclease P protein component 1
Authors:Sidote, D.J, Heideker, J, Hoffman, D.W.
Deposit date:2004-06-21
Release date:2004-10-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of archaeal ribonuclease P protein aRpp29 from Archaeoglobus fulgidus.
Biochemistry, 43, 2004
1VB8
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solution structure of vhr1, the first cyclotide from root tissue
Descriptor: Viola hederacea root peptide 1
Authors:Trabi, M, Craik, D.J.
Deposit date:2004-02-25
Release date:2004-12-21
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Tissue-specific expression of head-to-tail cyclized miniproteins in Violaceae and structure determination of the root cyclotide Viola hederacea root cyclotide1
Plant Cell, 16, 2004

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