Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 3021 件

7K3J
DownloadVisualize
BU of 7k3j by Molmil
Crystal structure of dLC8 in complex with Panoramix TQT+TQ peptide
分子名称: Dynein light chain 1, cytoplasmic, Protein panoramix, ...
著者Wang, J, Patel, D.J.
登録日2020-09-11
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex.
Genes Dev., 35, 2021
7K3K
DownloadVisualize
BU of 7k3k by Molmil
Crystal structure of dLC8 in complex with Panoramix TQT peptide
分子名称: Dynein light chain 1, cytoplasmic, Protein panoramix
著者Wang, J, Patel, D.J.
登録日2020-09-11
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.415 Å)
主引用文献Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex.
Genes Dev., 35, 2021
7K3L
DownloadVisualize
BU of 7k3l by Molmil
Crystal structure of dLC8 in complex with Panoramix TQ peptide
分子名称: 1,2-ETHANEDIOL, Dynein light chain 1, cytoplasmic, ...
著者Wang, J, Patel, D.J.
登録日2020-09-11
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex.
Genes Dev., 35, 2021
2JZM
DownloadVisualize
BU of 2jzm by Molmil
Chymotrypsin inhibitor C1 from Nicotiana alata
分子名称: Proteinase inhibitor
著者Schirra, H.J, Anderson, M.A, Craik, D.J.
登録日2008-01-09
公開日2008-11-25
最終更新日2019-10-09
実験手法SOLUTION NMR
主引用文献Structural refinement of insecticidal plant proteinase inhibitors from Nicotiana alata.
Protein Pept.Lett., 15, 2008
7JNN
DownloadVisualize
BU of 7jnn by Molmil
NMR Solution Structure of plant defensin SlD26
分子名称: SlD26 plant defensin
著者Harvey, P.J, Craik, D.J.
登録日2020-08-04
公開日2020-09-09
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Histidine-Rich Defensins from the Solanaceae and Brasicaceae Are Antifungal and Metal Binding Proteins.
J Fungi (Basel), 6, 2020
7JN6
DownloadVisualize
BU of 7jn6 by Molmil
NMR Solution Structure of plant defensin AtD90
分子名称: Defensin-like protein 204
著者Harvey, P.J, Craik, D.J.
登録日2020-08-03
公開日2020-09-09
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Histidine-Rich Defensins from the Solanaceae and Brasicaceae Are Antifungal and Metal Binding Proteins.
J Fungi (Basel), 6, 2020
7KZF
DownloadVisualize
BU of 7kzf by Molmil
High resolution cryo EM analysis of HPV16 identifies minor structural protein L2 and describes capsid flexibility
分子名称: Major capsid protein L1
著者Hartmann, S.R, Goetschius, D.J, Hafenstein, S.
登録日2020-12-10
公開日2021-02-24
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献High resolution cryo EM analysis of HPV16 identifies minor structural protein L2 and describes capsid flexibility.
Sci Rep, 11, 2021
7L9P
DownloadVisualize
BU of 7l9p by Molmil
Structure of human SHLD2-SHLD3-REV7-TRIP13(E253Q) complex
分子名称: Mitotic spindle assembly checkpoint protein MAD2B, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Pachytene checkpoint protein 2 homolog, ...
著者Xie, W, Patel, D.J.
登録日2021-01-04
公開日2021-03-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Molecular mechanisms of assembly and TRIP13-mediated remodeling of the human Shieldin complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
7K22
DownloadVisualize
BU of 7k22 by Molmil
Murine polyomavirus pentavalent capsomer with 8A7H5 Fab, subparticle reconstruction
分子名称: 8A7H5 Fab heavy chain, 8A7H5 Fab light chain, Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7K7X
DownloadVisualize
BU of 7k7x by Molmil
Solution structure of the cyclotide pase A
分子名称: Cyclotide pase A
著者Chan, L.Y, Pinto, M.E.F, Craik, D.J.
登録日2020-09-24
公開日2021-08-04
実験手法SOLUTION NMR
主引用文献Cyclotides from Brazilian Palicourea sessilis and Their Effects on Human Lymphocytes.
J.Nat.Prod., 84, 2021
7K25
DownloadVisualize
BU of 7k25 by Molmil
Murine polyomavirus hexavalent capsomer, subparticle reconstruction
分子名称: Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7JW6
DownloadVisualize
BU of 7jw6 by Molmil
Crystal structure of Drosophila Nibbler EXO domain
分子名称: Exonuclease mut-7 homolog
著者Xie, W, Sowemimo, I, Hayashi, R, Wang, J, Brennecke, J, Ameres, S.L, Patel, D.J.
登録日2020-08-24
公開日2021-01-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure-function analysis of microRNA 3'-end trimming by Nibbler.
Proc.Natl.Acad.Sci.USA, 117, 2020
7KBH
DownloadVisualize
BU of 7kbh by Molmil
Structure of Human HDAC2 in complex with a 2-substituted benzamide inhibitor (compound 16)
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Histone deacetylase 2, ...
著者Klein, D.J, Liu, J.
登録日2020-10-02
公開日2020-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Discovery of Highly Selective and Potent HDAC3 Inhibitors Based on a 2-Substituted Benzamide Zinc Binding Group.
Acs Med.Chem.Lett., 11, 2020
7K23
DownloadVisualize
BU of 7k23 by Molmil
Murine polyomavirus hexavalent capsomer with 8A7H5 Fab, subparticle reconstruction
分子名称: 8A7H5 Fab heavy chain, 8A7H5 Fab light chain, Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7JW2
DownloadVisualize
BU of 7jw2 by Molmil
Crystal structure of Aedes aegypti Nibbler EXO domain
分子名称: Exonuclease mut-7 homolog
著者Xie, W, Sowemimo, I, Hayashi, R, Wang, J, Brennecke, J, Ameres, S.L, Patel, D.J.
登録日2020-08-24
公開日2021-01-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure-function analysis of microRNA 3'-end trimming by Nibbler.
Proc.Natl.Acad.Sci.USA, 117, 2020
7JW3
DownloadVisualize
BU of 7jw3 by Molmil
Crystal structure of Aedes aegypti Nibbler NTD domain
分子名称: Exonuclease mut-7 homolog
著者Xie, W, Sowemimo, I, Hayashi, R, Wang, J, Brennecke, J, Ameres, S.L, Patel, D.J.
登録日2020-08-24
公開日2021-01-20
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structure-function analysis of microRNA 3'-end trimming by Nibbler.
Proc.Natl.Acad.Sci.USA, 117, 2020
7KBG
DownloadVisualize
BU of 7kbg by Molmil
Structure of Human HDAC2 in complex with a 2-substituted benzamide inhibitor (compound 20)
分子名称: 2,5-dichloro-1H-benzimidazole, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Liu, J.
登録日2020-10-02
公開日2020-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Discovery of Highly Selective and Potent HDAC3 Inhibitors Based on a 2-Substituted Benzamide Zinc Binding Group.
Acs Med.Chem.Lett., 11, 2020
7K24
DownloadVisualize
BU of 7k24 by Molmil
Murine polyomavirus pentavalent capsomer, subparticle reconstruction
分子名称: Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7LHL
DownloadVisualize
BU of 7lhl by Molmil
cryo-EM structure of Mycobacterium smegmatis Lhr helicase C-terminal domain
分子名称: ATP-dependent DNA helicase
著者Wang, J, Warren, G.M, Shuman, S, Patel, D.J.
登録日2021-01-25
公開日2021-04-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Oligomeric quaternary structure of Escherichia coli and Mycobacterium smegmatis Lhr helicases is nucleated by a novel C-terminal domain composed of five winged-helix modules.
Nucleic Acids Res., 49, 2021
2GWX
DownloadVisualize
BU of 2gwx by Molmil
MOLECULAR RECOGNITION OF FATTY ACIDS BY PEROXISOME PROLIFERATOR-ACTIVATED RECEPTORS
分子名称: PROTEIN (PPAR-DELTA)
著者Xu, H.E, Lambert, M.H, Montana, V.G, Park, D.J, Blanchard, S, Brown, P, Sternbach, D, Lehmann, J, Bruce, G.W, Willson, T.M, Kliewer, S.A, Milburn, M.V.
登録日1999-03-11
公開日2000-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular recognition of fatty acids by peroxisome proliferator-activated receptors.
Mol.Cell, 3, 1999
7LXG
DownloadVisualize
BU of 7lxg by Molmil
Homocitrullinated beta-lactamase OXA-48
分子名称: Beta-lactamase, CHLORIDE ION, SULFATE ION
著者Serrano-Negron, J.E, King, D.T, Vocadlo, D.J.
登録日2021-03-03
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Chemoproteomic identification of CO 2 -dependent lysine carboxylation in proteins.
Nat.Chem.Biol., 18, 2022
7JS8
DownloadVisualize
BU of 7js8 by Molmil
STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN ETHYL KETONE INHIBITOR CONTAINING A SPIRO-BICYCLIC GROUP (COMPOUND 22)
分子名称: (1S)-N-{(1S)-7,7-dihydroxy-1-[4-(2-methylquinolin-6-yl)-1H-imidazol-2-yl]nonyl}-6-methyl-6-azaspiro[2.5]octane-1-carboxamide, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Yu, W.
登録日2020-08-14
公開日2021-08-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.634 Å)
主引用文献Discovery of Ethyl Ketone-Based Highly Selective HDACs 1, 2, 3 Inhibitors for HIV Latency Reactivation with Minimum Cellular Potency Serum Shift and Reduced hERG Activity.
J.Med.Chem., 64, 2021
7JLS
DownloadVisualize
BU of 7jls by Molmil
RV3666c bound to tripeptide
分子名称: Peptide SER-VAL-ALA, Probable periplasmic dipeptide-binding lipoprotein DppA
著者Lee, R.E, Griffith, E.C, Miller, D.J.
登録日2020-07-30
公開日2021-06-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Biophysical analysis of the Mycobacteria tuberculosis peptide binding protein DppA reveals a stringent peptide binding pocket.
Tuberculosis (Edinb), 132, 2021
7LTG
DownloadVisualize
BU of 7ltg by Molmil
STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH APICIDIN
分子名称: (3S,6S,9S,15aR)-9-[(2S)-butan-2-yl]-3-(6,6-dihydroxyoctyl)-6-[(1-methoxy-1H-indol-3-yl)methyl]octahydro-2H-pyrido[1,2-a][1,4,7,10]tetraazacyclododecine-1,4,7,10(3H,12H)-tetrone, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Beshore, D.C.
登録日2021-02-19
公開日2021-05-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Redefining the Histone Deacetylase Inhibitor Pharmacophore: High Potency with No Zinc Cofactor Interaction.
Acs Med.Chem.Lett., 12, 2021
7LTK
DownloadVisualize
BU of 7ltk by Molmil
STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN INHIBITOR THAT LACKS A ZINC BINDING GROUP (COMPOUND 12)
分子名称: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Beshore, D.C.
登録日2021-02-19
公開日2021-05-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Redefining the Histone Deacetylase Inhibitor Pharmacophore: High Potency with No Zinc Cofactor Interaction.
Acs Med.Chem.Lett., 12, 2021

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon