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PDB: 2998 件

9BGP
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BU of 9bgp by Molmil
X-ray structure of the aminotransferase from Vibrio vulnificus responsible for the biosynthesis of 2,3-diacetamido-4-amino-2,3,4-trideoxy-arabinose in the presence of its internal aldimine
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, aminotransferase
著者Fait, D.J, Thoden, J.B, Holden, H.M.
登録日2024-04-19
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Biochemical Investigation of an Aminotransferase Required for the Production of 2,3,4-triacetamido-2,3,4-trideoxy-L-arabinose
To Be Published
9BGR
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BU of 9bgr by Molmil
X-ray structure of the aminotransferase from Vibrio vulnificus responsible for the biosynthesis of 2,3-diacetamido-4-amino-2,3,4-trideoxy-arabinose in the presence of its external aldimine with 2,3-diacetamido-4-amino-2,3,4-trideoxy-l-arabinose
分子名称: (2R,3R,4R,5R)-3,4-diacetamido-5-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methoxy)oxan-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name), 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Fait, D.J, Thoden, J.B, Holden, H.M.
登録日2024-04-19
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Biochemical Investigation of an Aminotransferase Required for the Production of 2,3,4-triacetamido-2,3,4-trideoxy-L-arabinose
To Be Published
8V1J
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BU of 8v1j by Molmil
Structure of an allelic variant of Puccinia graminis f. sp. tritici (Pgt) effector AvrSr27 (AvrSr27-1)
分子名称: AvrSr27, ZINC ION
著者Outram, M.A, Williams, S.J, Ericsson, D.J.
登録日2023-11-20
公開日2024-06-12
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.41596365 Å)
主引用文献AvrSr27 is a zinc-bound effector with a modular structure important for immune recognition.
New Phytol., 243, 2024
8URU
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BU of 8uru by Molmil
Spo11 core complex with hairpin DNA
分子名称: Antiviral protein SKI8, Hairpin DNA, MAGNESIUM ION, ...
著者Yu, Y, Patel, D.J.
登録日2023-10-26
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of the yeast Spo11 core complex bound to DNA
To Be Published
7JGX
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BU of 7jgx by Molmil
Solution NMR structure of neuroVAL, a derived peptide from wasp
分子名称: neuroVAL derived peptide ILE-PHE-TRP-LEU-PHE-ARG-GLY-LYS-ALA-ASP-VAL-ALA-LEU-NH2
著者Muller, J.A.I, Craik, D.J, Koehbach, J.
登録日2020-07-20
公開日2020-12-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Antimicrobial and Anticancer Properties of Synthetic Peptides Derived from the Wasp Parachartergus fraternus.
Chembiochem, 22, 2021
7JLS
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BU of 7jls by Molmil
RV3666c bound to tripeptide
分子名称: Peptide SER-VAL-ALA, Probable periplasmic dipeptide-binding lipoprotein DppA
著者Lee, R.E, Griffith, E.C, Miller, D.J.
登録日2020-07-30
公開日2021-06-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Biophysical analysis of the Mycobacteria tuberculosis peptide binding protein DppA reveals a stringent peptide binding pocket.
Tuberculosis (Edinb), 132, 2021
7JGY
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BU of 7jgy by Molmil
Solution NMR structure of protonectin, a peptide from wasp
分子名称: Protonectin peptide ILE-LEU-GLY-THR-ILE-LEU-GLY-LEU-LEU-LYS-GLY-LEU-NH2
著者Muller, J.A.I, Craik, D.J, Koehbach, J.
登録日2020-07-20
公開日2020-12-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Antimicrobial and Anticancer Properties of Synthetic Peptides Derived from the Wasp Parachartergus fraternus.
Chembiochem, 22, 2021
7JHF
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BU of 7jhf by Molmil
Solution NMR structure of protonectin-F, a derived peptide from wasp
分子名称: Protonectin-F derived peptide ILE-PHE-GLY-THR-ILE-LEU-GLY-PHE-LEU-LYS-GLY-LEU-NH2
著者Muller, J.A.I, Craik, D.J, Koehbach, J.
登録日2020-07-20
公開日2020-12-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Antimicrobial and Anticancer Properties of Synthetic Peptides Derived from the Wasp Parachartergus fraternus.
Chembiochem, 22, 2021
7JQG
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BU of 7jqg by Molmil
Crystal structure of human PPARgamma ligand binding domain Y473E mutant in complex with GW1929
分子名称: (2~{S})-3-[4-[2-[methyl(pyridin-2-yl)amino]ethoxy]phenyl]-2-[[2-(phenylcarbonyl)phenyl]amino]propanoic acid, Peroxisome proliferator-activated receptor gamma
著者Shang, J, Kojetin, D.J.
登録日2020-08-10
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural mechanism underlying ligand binding and activation of PPAR gamma.
Structure, 29, 2021
7K3J
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BU of 7k3j by Molmil
Crystal structure of dLC8 in complex with Panoramix TQT+TQ peptide
分子名称: Dynein light chain 1, cytoplasmic, Protein panoramix, ...
著者Wang, J, Patel, D.J.
登録日2020-09-11
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex.
Genes Dev., 35, 2021
7K3K
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BU of 7k3k by Molmil
Crystal structure of dLC8 in complex with Panoramix TQT peptide
分子名称: Dynein light chain 1, cytoplasmic, Protein panoramix
著者Wang, J, Patel, D.J.
登録日2020-09-11
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.415 Å)
主引用文献Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex.
Genes Dev., 35, 2021
7K3L
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BU of 7k3l by Molmil
Crystal structure of dLC8 in complex with Panoramix TQ peptide
分子名称: 1,2-ETHANEDIOL, Dynein light chain 1, cytoplasmic, ...
著者Wang, J, Patel, D.J.
登録日2020-09-11
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex.
Genes Dev., 35, 2021
7K22
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BU of 7k22 by Molmil
Murine polyomavirus pentavalent capsomer with 8A7H5 Fab, subparticle reconstruction
分子名称: 8A7H5 Fab heavy chain, 8A7H5 Fab light chain, Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7K23
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BU of 7k23 by Molmil
Murine polyomavirus hexavalent capsomer with 8A7H5 Fab, subparticle reconstruction
分子名称: 8A7H5 Fab heavy chain, 8A7H5 Fab light chain, Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7JW2
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BU of 7jw2 by Molmil
Crystal structure of Aedes aegypti Nibbler EXO domain
分子名称: Exonuclease mut-7 homolog
著者Xie, W, Sowemimo, I, Hayashi, R, Wang, J, Brennecke, J, Ameres, S.L, Patel, D.J.
登録日2020-08-24
公開日2021-01-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure-function analysis of microRNA 3'-end trimming by Nibbler.
Proc.Natl.Acad.Sci.USA, 117, 2020
7K7X
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BU of 7k7x by Molmil
Solution structure of the cyclotide pase A
分子名称: Cyclotide pase A
著者Chan, L.Y, Pinto, M.E.F, Craik, D.J.
登録日2020-09-24
公開日2021-08-04
実験手法SOLUTION NMR
主引用文献Cyclotides from Brazilian Palicourea sessilis and Their Effects on Human Lymphocytes.
J.Nat.Prod., 84, 2021
7K25
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BU of 7k25 by Molmil
Murine polyomavirus hexavalent capsomer, subparticle reconstruction
分子名称: Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7KBH
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BU of 7kbh by Molmil
Structure of Human HDAC2 in complex with a 2-substituted benzamide inhibitor (compound 16)
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Histone deacetylase 2, ...
著者Klein, D.J, Liu, J.
登録日2020-10-02
公開日2020-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Discovery of Highly Selective and Potent HDAC3 Inhibitors Based on a 2-Substituted Benzamide Zinc Binding Group.
Acs Med.Chem.Lett., 11, 2020
7JW6
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BU of 7jw6 by Molmil
Crystal structure of Drosophila Nibbler EXO domain
分子名称: Exonuclease mut-7 homolog
著者Xie, W, Sowemimo, I, Hayashi, R, Wang, J, Brennecke, J, Ameres, S.L, Patel, D.J.
登録日2020-08-24
公開日2021-01-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure-function analysis of microRNA 3'-end trimming by Nibbler.
Proc.Natl.Acad.Sci.USA, 117, 2020
7JNN
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BU of 7jnn by Molmil
NMR Solution Structure of plant defensin SlD26
分子名称: SlD26 plant defensin
著者Harvey, P.J, Craik, D.J.
登録日2020-08-04
公開日2020-09-09
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Histidine-Rich Defensins from the Solanaceae and Brasicaceae Are Antifungal and Metal Binding Proteins.
J Fungi (Basel), 6, 2020
7JN6
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BU of 7jn6 by Molmil
NMR Solution Structure of plant defensin AtD90
分子名称: Defensin-like protein 204
著者Harvey, P.J, Craik, D.J.
登録日2020-08-03
公開日2020-09-09
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Histidine-Rich Defensins from the Solanaceae and Brasicaceae Are Antifungal and Metal Binding Proteins.
J Fungi (Basel), 6, 2020
7JW3
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BU of 7jw3 by Molmil
Crystal structure of Aedes aegypti Nibbler NTD domain
分子名称: Exonuclease mut-7 homolog
著者Xie, W, Sowemimo, I, Hayashi, R, Wang, J, Brennecke, J, Ameres, S.L, Patel, D.J.
登録日2020-08-24
公開日2021-01-20
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structure-function analysis of microRNA 3'-end trimming by Nibbler.
Proc.Natl.Acad.Sci.USA, 117, 2020
7KBG
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BU of 7kbg by Molmil
Structure of Human HDAC2 in complex with a 2-substituted benzamide inhibitor (compound 20)
分子名称: 2,5-dichloro-1H-benzimidazole, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Liu, J.
登録日2020-10-02
公開日2020-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Discovery of Highly Selective and Potent HDAC3 Inhibitors Based on a 2-Substituted Benzamide Zinc Binding Group.
Acs Med.Chem.Lett., 11, 2020
7K24
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BU of 7k24 by Molmil
Murine polyomavirus pentavalent capsomer, subparticle reconstruction
分子名称: Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7JS8
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BU of 7js8 by Molmil
STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN ETHYL KETONE INHIBITOR CONTAINING A SPIRO-BICYCLIC GROUP (COMPOUND 22)
分子名称: (1S)-N-{(1S)-7,7-dihydroxy-1-[4-(2-methylquinolin-6-yl)-1H-imidazol-2-yl]nonyl}-6-methyl-6-azaspiro[2.5]octane-1-carboxamide, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Yu, W.
登録日2020-08-14
公開日2021-08-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.634 Å)
主引用文献Discovery of Ethyl Ketone-Based Highly Selective HDACs 1, 2, 3 Inhibitors for HIV Latency Reactivation with Minimum Cellular Potency Serum Shift and Reduced hERG Activity.
J.Med.Chem., 64, 2021

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件を2024-07-24に公開中

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