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PDB: 2999 results

1HY7
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A CARBOXYLIC ACID BASED INHIBITOR IN COMPLEX WITH MMP3
Descriptor: CALCIUM ION, R-2-{[4'-METHOXY-(1,1'-BIPHENYL)-4-YL]-SULFONYL}-AMINO-6-METHOXY-HEX-4-YNOIC ACID, STROMELYSIN-1, ...
Authors:Natchus, M.G, Bookland, R.G, Laufersweiler, M.J, Pikul, S, Almstead, N.G, De, B, Janusz, M.J, Hsieh, L.C, Gu, F, Pokross, M.E, Patel, V.S, Garver, S.M, Peng, S.X, Branch, T.M, King, S.L, Baker, T.R, Foltz, D.J, Mieling, G.E.
Deposit date:2001-01-18
Release date:2002-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Development of new carboxylic acid-based MMP inhibitors derived from functionalized propargylglycines.
J.Med.Chem., 44, 2001
1I2Z
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E. COLI ENOYL REDUCTASE IN COMPLEX WITH NAD AND BRL-12654
Descriptor: 4-(2-THIENYL)-1-(4-METHYLBENZYL)-1H-IMIDAZOLE, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Heerding, D.A, Miller, W.H, Payne, D.J, Janson, C.A, Qiu, X.
Deposit date:2001-02-12
Release date:2002-02-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:1,4-Disubstituted imidazoles are potential antibacterial agents functioning as inhibitors of enoyl acyl carrier protein reductase (FabI).
Bioorg.Med.Chem.Lett., 11, 2001
2F2J
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Solution structure of [W19K, P20N, V21K]-kalata B1
Descriptor: Kalata-B1
Authors:Clark, R.J, Daly, N.L, Craik, D.J.
Deposit date:2005-11-17
Release date:2006-01-31
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Structural plasticity of the cyclic cystine knot framework: implications for biological activity and drug design
Biochem.J., 394, 2006
1I3A
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BU of 1i3a by Molmil
RNASE HII FROM ARCHAEOGLOBUS FULGIDUS WITH COBALT HEXAMMINE CHLORIDE
Descriptor: COBALT HEXAMMINE(III), RIBONUCLEASE HII
Authors:Chapados, B.R, Chai, Q, Hosfield, D.J, Qiu, J, Shen, B, Tainer, J.A.
Deposit date:2001-02-13
Release date:2001-04-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural biochemistry of a type 2 RNase H: RNA primer recognition and removal during DNA replication.
J.Mol.Biol., 307, 2001
2F5G
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Crystal structure of IS200 transposase
Descriptor: Transposase, putative
Authors:Lee, H.H, Yoon, J.Y, Kim, H.S, Kang, J.Y, Kim, K.H, Kim, D.J, Suh, S.W.
Deposit date:2005-11-25
Release date:2005-12-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a Metal Ion-bound IS200 Transposase
J.Biol.Chem., 281, 2006
1J77
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Crystal Structure of Gram-negative Bacterial Heme Oxygenase Complexed with Heme
Descriptor: HemO, PROTOPORPHYRIN IX CONTAINING FE
Authors:Schuller, D.J, Zhu, W, Stojiljkovic, I, Wilks, A, Poulos, T.L.
Deposit date:2001-05-15
Release date:2001-05-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of heme oxygenase from the gram-negative pathogen Neisseria meningitidis and a comparison with mammalian heme oxygenase-1.
Biochemistry, 40, 2001
2F4F
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Crystal structure of IS200 transposase
Descriptor: MANGANESE (II) ION, Transposase, putative
Authors:Lee, H.H, Yoon, J.Y, Kim, H.S, Kang, J.Y, Kim, K.H, Kim, D.J, Suh, S.W.
Deposit date:2005-11-23
Release date:2005-12-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a Metal Ion-bound IS200 Transposase
J.Biol.Chem., 281, 2006
2EUK
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Crystal Structure of Human Glycolipid Transfer Protein complexed with 24:1 Galactosylceramide
Descriptor: (15E)-TETRACOS-15-ENOIC ACID, Glycolipid transfer protein, N-OCTANE, ...
Authors:Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
Deposit date:2005-10-28
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
1IFT
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RICIN A-CHAIN (RECOMBINANT)
Descriptor: RICIN
Authors:Weston, S.A, Tucker, A.D, Thatcher, D.R, Derbyshire, D.J, Pauptit, R.A.
Deposit date:1996-07-05
Release date:1998-01-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray structure of recombinant ricin A-chain at 1.8 A resolution.
J.Mol.Biol., 244, 1994
2EVT
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Crystal structure of D48V mutant of human Glycolipid Transfer Protein
Descriptor: Glycolipid transfer protein, HEXANE
Authors:Malinina, L, Malakhova, M.L, Teplov, A, Brown, R.E, Patel, D.J.
Deposit date:2005-10-31
Release date:2005-11-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2F8T
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Crystal structure of Aa-Ago with externally-bound siRNA
Descriptor: 26-MER, Argonaute protein
Authors:Yuan, Y.R, Chen, H.Y, Patel, D.J.
Deposit date:2005-12-03
Release date:2006-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A Potential Protein-RNA Recognition Event along the RISC-Loading Pathway from the Structure of A. aeolicus Argonaute with Externally Bound siRNA.
Structure, 14, 2006
1IFS
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BU of 1ifs by Molmil
RICIN A-CHAIN (RECOMBINANT) COMPLEX WITH ADENOSINE (ADENOSINE BECOMES ADENINE IN THE COMPLEX)
Descriptor: ADENINE, RICIN
Authors:Weston, S.A, Tucker, A.D, Thatcher, D.R, Derbyshire, D.J, Pauptit, R.A.
Deposit date:1996-07-05
Release date:1998-01-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of recombinant ricin A-chain at 1.8 A resolution.
J.Mol.Biol., 244, 1994
2GBX
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Crystal Structure of Biphenyl 2,3-Dioxygenase from Sphingomonas yanoikuyae B1 Bound to Biphenyl
Descriptor: BIPHENYL, Biphenyl 2,3-Dioxygenase Alpha Subunit, Biphenyl 2,3-Dioxygenase Beta Subunit, ...
Authors:Ferraro, D.J, Brown, E.N, Yu, C, Parales, R.E, Gibson, D.T, Ramaswamy, S.
Deposit date:2006-03-12
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1.
Bmc Struct.Biol., 7, 2007
2GBR
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Crystal Structure of the 35-36 MoaD Insertion Mutant of Ubiquitin
Descriptor: CADMIUM ION, Ubiquitin
Authors:Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D.
Deposit date:2006-03-10
Release date:2006-05-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis.
J.Mol.Biol., 359, 2006
2GD4
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Crystal Structure of the Antithrombin-S195A Factor Xa-Pentasaccharide Complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside, ...
Authors:Johnson, D.J, Li, W, Adams, T.E, Huntington, J.A.
Deposit date:2006-03-15
Release date:2006-05-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Antithrombin-S195A factor Xa-heparin structure reveals the allosteric mechanism of antithrombin activation.
Embo J., 25, 2006
1IL5
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BU of 1il5 by Molmil
STRUCTURE OF RICIN A CHAIN BOUND WITH INHIBITOR 2,5-DIAMINO-4,6-DIHYDROXYPYRIMIDINE (DDP)
Descriptor: 2,4-DIAMINO-4,6-DIHYDROXYPYRIMIDINE, RICIN A CHAIN
Authors:Miller, D.J, Ravikumar, K, Shen, H, Suh, J.-K, Kerwin, S.M, Robertus, J.D.
Deposit date:2001-05-07
Release date:2002-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-based design and characterization of novel platforms for ricin and shiga toxin inhibition.
J.Med.Chem., 45, 2002
1J70
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CRYSTAL STRUCTURE OF YEAST ATP SULFURYLASE
Descriptor: ATP SULPHURYLASE, PHOSPHATE ION, SODIUM ION
Authors:Lalor, D.J, Schnyder, T, Saridakis, V, Pilloff, D.E, Dong, A, Tang, H, Leyh, T.S, Pai, E.F.
Deposit date:2001-05-15
Release date:2003-06-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional analysis of a truncated form of Saccharomyces cerevisiae ATP sulfurylase: C-terminal domain essential for oligomer formation but not for activity.
Protein Eng., 16, 2003
2G30
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beta appendage of AP2 complexed with ARH peptide
Descriptor: 16-mer peptide from Low density lipoprotein receptor adapter protein 1, AP-2 complex subunit beta-1, peptide sequence AAF
Authors:Edeling, M.A, Collins, B.M, Traub, L.M, Owen, D.J.
Deposit date:2006-02-17
Release date:2006-03-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular Switches Involving the AP-2 beta2 Appendage Regulate Endocytic Cargo Selection and Clathrin Coat Assembly
Dev.Cell, 10, 2006
1IL9
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STRUCTURE OF RICIN A CHAIN BOUND WITH INHIBITOR 8-METHYL-9-OXOGUANINE
Descriptor: 5-AMINO-2-METHYL-6H-OXAZOLO[5,4-D]PYRIMIDIN-7-ONE, RICIN A CHAIN
Authors:Miller, D.J, Ravikumar, K, Shen, H, Suh, J.-K, Kerwin, S.M, Robertus, J.D.
Deposit date:2001-05-07
Release date:2002-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-based design and characterization of novel platforms for ricin and shiga toxin inhibition.
J.Med.Chem., 45, 2002
1IL3
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STRUCTURE OF RICIN A CHAIN BOUND WITH INHIBITOR 7-DEAZAGUANINE
Descriptor: 7-DEAZAGUANINE, RICIN A CHAIN
Authors:Miller, D.J, Ravikumar, K, Shen, H, Suh, J.-K, Kerwin, S.M, Robertus, J.D.
Deposit date:2001-05-07
Release date:2002-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-based design and characterization of novel platforms for ricin and shiga toxin inhibition.
J.Med.Chem., 45, 2002
2GBK
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Crystal Structure of the 9-10 MoaD Insertion Mutant of Ubiquitin
Descriptor: Ubiquitin
Authors:Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D.
Deposit date:2006-03-10
Release date:2006-05-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis.
J.Mol.Biol., 359, 2006
1IJY
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CRYSTAL STRUCTURE OF THE CYSTEINE-RICH DOMAIN OF MOUSE FRIZZLED 8 (MFZ8)
Descriptor: FRIZZLED HOMOLOG 8
Authors:Dann III, C.E, Hsieh, J.C, Rattner, A, Sharma, D, Nathans, J, Leahy, D.J.
Deposit date:2001-05-01
Release date:2001-07-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Insights into Wnt binding and signalling from the structures of two Frizzled cysteine-rich domains.
Nature, 412, 2001
2GK1
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X-ray crystal structure of NGT-bound HexA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, Beta-hexosaminidase subunit alpha, ...
Authors:Lemieux, M.J, Mark, B.L, Cherney, M.M, Withers, S.G, Mahuran, D.J, James, M.N.
Deposit date:2006-03-31
Release date:2006-05-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystallographic Structure of Human beta-Hexosaminidase A: Interpretation of Tay-Sachs Mutations and Loss of G(M2) Ganglioside Hydrolysis.
J.Mol.Biol., 359, 2006
1IJX
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CRYSTAL STRUCTURE OF THE CYSTEINE-RICH DOMAIN OF SECRETED FRIZZLED-RELATED PROTEIN 3 (SFRP-3;FZB)
Descriptor: SECRETED FRIZZLED-RELATED SEQUENCE PROTEIN 3, SULFATE ION
Authors:Dann III, C.E, Hsieh, J.C, Rattner, A, Sharma, D, Nathans, J, Leahy, D.J.
Deposit date:2001-04-30
Release date:2001-07-11
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into Wnt binding and signalling from the structures of two Frizzled cysteine-rich domains.
Nature, 412, 2001
1IL4
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STRUCTURE OF RICIN A CHAIN BOUND WITH INHIBITOR 9-DEAZAGUANINE
Descriptor: 9-DEAZAGUANINE, RICIN A CHAIN
Authors:Miller, D.J, Ravikumar, K, Shen, H, Suh, J.-K, Kerwin, S.M, Robertus, J.D.
Deposit date:2001-05-07
Release date:2002-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure-based design and characterization of novel platforms for ricin and shiga toxin inhibition.
J.Med.Chem., 45, 2002

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