Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 3016 件

1BQ4
DownloadVisualize
BU of 1bq4 by Molmil
SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE IN COMPLEX WITH BENZENE HEXACARBOXYLATE
分子名称: BENZENE HEXACARBOXYLIC ACID, PROTEIN (PHOSPHOGLYCERATE MUTASE 1), SULFATE ION
著者Rigden, D.J, Phillips, S.E.V, Fothergill-Gilmore, L.A.
登録日1998-08-20
公開日1998-08-26
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Polyanionic inhibitors of phosphoglycerate mutase: combined structural and biochemical analysis.
J.Mol.Biol., 289, 1999
5FLG
DownloadVisualize
BU of 5flg by Molmil
Crystal structure of the 6-carboxyhexanoate-CoA ligase (BioW)from Bacillus subtilis in complex with AMPPNP
分子名称: 6-CARBOXYHEXANOATE--COA LIGASE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Moynie, L, Wang, M, Campopiano, D.J, Naismith, J.H.
登録日2015-10-26
公開日2016-11-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Using the pimeloyl-CoA synthetase adenylation fold to synthesize fatty acid thioesters.
Nat. Chem. Biol., 13, 2017
5FM0
DownloadVisualize
BU of 5fm0 by Molmil
Crystal structure of the 6-carboxyhexanoate-CoA ligase (BioW)from Bacillus subtilis (PtCl4 derivative)
分子名称: 6-CARBOXYHEXANOATE--COA LIGASE, MAGNESIUM ION, PIMELOYL-AMP, ...
著者Moynie, L, Wang, M, Campopiano, D.J, Naismith, J.H.
登録日2015-10-29
公開日2016-11-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Using the pimeloyl-CoA synthetase adenylation fold to synthesize fatty acid thioesters.
Nat. Chem. Biol., 13, 2017
6YL6
DownloadVisualize
BU of 6yl6 by Molmil
Cdk2(F80C)
分子名称: Cyclin-dependent kinase 2
著者Craven, G, Morgan, R.M.L, Mann, D.J.
登録日2020-04-06
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Multiparameter Kinetic Analysis for Covalent Fragment Optimization by Using Quantitative Irreversible Tethering (qIT).
Chembiochem, 21, 2020
5FL1
DownloadVisualize
BU of 5fl1 by Molmil
Structure of a hydrolase with an inhibitor
分子名称: (3~{a}~{R},5~{R},6~{S},7~{R},7~{a}~{R})-5-(hydroxymethyl)-2-(prop-2-enylamino)-5,6,7,7~{a}-tetrahydro-3~{a}~{H}-pyrano[3,2-d][1,3]thiazole-6,7-diol, 1,2-ETHANEDIOL, CALCIUM ION, ...
著者Cekic, N, Heinonen, J.E, Stubbs, K.A, Roth, C, McEachern, E.J, Davies, G.J, Vocadlo, D.J.
登録日2015-10-20
公開日2016-08-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Analysis of transition state mimicry by tight binding aminothiazoline inhibitors provides insight into catalysis by humanO-GlcNAcase.
Chem Sci, 7, 2016
7EL5
DownloadVisualize
BU of 7el5 by Molmil
Crystal structure of Sizzled protein from Xenopus Laevis
分子名称: Secreted Xwnt8 inhibitor sizzled
著者Sharma, U, Harlos, K, Hulmes, D.J.S, Aghajari, N.
登録日2021-04-08
公開日2022-09-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Dynamics of the secreted frizzled related protein Sizzled and potential implications for binding to bone morphogenetic protein-1 (BMP-1).
Sci Rep, 12, 2022
7O9J
DownloadVisualize
BU of 7o9j by Molmil
Crystal structure of DyP-type peroxidase from Dictyostelium discoideum in complex with an activated form of oxygen
分子名称: 1,2-ETHANEDIOL, DyPA, OXYGEN MOLECULE, ...
著者Rai, A, Fedorov, R, Manstein, D.J.
登録日2021-04-16
公開日2021-07-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Biochemical Characterization of a Dye-Decolorizing Peroxidase from Dictyostelium discoideum .
Int J Mol Sci, 22, 2021
7O9L
DownloadVisualize
BU of 7o9l by Molmil
Dictyostelium discoideum dye decolorizing peroxidase DyPA in complex with cyanide.
分子名称: 1,2-ETHANEDIOL, CYANIDE ION, DyPA, ...
著者Rai, A, Fedorov, R, Manstein, D.J.
登録日2021-04-16
公開日2021-07-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and Biochemical Characterization of a Dye-Decolorizing Peroxidase from Dictyostelium discoideum .
Int J Mol Sci, 22, 2021
7ODZ
DownloadVisualize
BU of 7odz by Molmil
Dictyostelium discoideum dye decolorizing peroxidase DyPA in complex with an activated form of oxygen and veratryl alcohol
分子名称: 1,2-ETHANEDIOL, DyPA, OXYGEN MOLECULE, ...
著者Rai, A, Fedorov, R, Manstein, D.J.
登録日2021-04-30
公開日2021-07-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and Biochemical Characterization of a Dye-Decolorizing Peroxidase from Dictyostelium discoideum .
Int J Mol Sci, 22, 2021
4AE2
DownloadVisualize
BU of 4ae2 by Molmil
Crystal structure of Human fibrillar procollagen type III C- propeptide trimer
分子名称: CALCIUM ION, COLLAGEN ALPHA-1(III) CHAIN, NITRATE ION
著者Bourhis, J.M, Mariano, N, Zhao, Y, Harlos, K, Jones, E.Y, Moali, C, Aghajari, N, Hulmes, D.J.
登録日2012-01-05
公開日2012-09-12
最終更新日2019-04-03
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural Basis of Fibrillar Collagen Trimerization and Related Genetic Disorders.
Nat.Struct.Mol.Biol., 19, 2012
6Y5J
DownloadVisualize
BU of 6y5j by Molmil
Dilated form 2 of X-31 Influenza Haemagglutinin at pH 5 (State III)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, X-31 Influenza Haemagglutinin HA1, ...
著者Benton, D.J, Rosenthal, P.B.
登録日2020-02-25
公開日2020-06-10
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献Structural transitions in influenza haemagglutinin at membrane fusion pH.
Nature, 583, 2020
6YAE
DownloadVisualize
BU of 6yae by Molmil
AP2 core in physiological buffer
分子名称: AP-2 complex subunit alpha, AP-2 complex subunit beta, AP-2 complex subunit mu, ...
著者Kane Dickson, V, Kovtun, O, Kelly, B.T, Owen, D.J, Briggs, J.A.G.
登録日2020-03-12
公開日2020-07-29
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Architecture of the AP2/clathrin coat on the membranes of clathrin-coated vesicles.
Sci Adv, 6, 2020
6YLK
DownloadVisualize
BU of 6ylk by Molmil
Cdk2(F80C) with Covalent Adduct TK22 at F80C
分子名称: Cyclin-dependent kinase 2, methyl 4-ethyl-1-propanoyl-2,3-dihydroquinoxaline-6-carboxylate
著者Craven, G, Morgan, R.M.L, Mann, D.J.
登録日2020-04-07
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Multiparameter Kinetic Analysis for Covalent Fragment Optimization by Using Quantitative Irreversible Tethering (qIT).
Chembiochem, 21, 2020
7NR2
DownloadVisualize
BU of 7nr2 by Molmil
The structure of the SBP TarP_Sse in complex with coumarate
分子名称: 4'-HYDROXYCINNAMIC ACID, SULFATE ION, TRAP dicarboxylate transporter, ...
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-02
公開日2021-10-06
最終更新日2022-01-26
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NRR
DownloadVisualize
BU of 7nrr by Molmil
The structure of the SBP TarP_Csal in complex with caffeate
分子名称: CAFFEIC ACID, MAGNESIUM ION, TRAP dicarboxylate transporter-DctP subunit
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-04
公開日2021-10-06
最終更新日2022-01-26
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NQG
DownloadVisualize
BU of 7nqg by Molmil
The structure of the SBP TarP_Rhp in complex with 4-hydroxyphenylacetate
分子名称: 1,2-ETHANEDIOL, 4-HYDROXYPHENYLACETATE, PHOSPHATE ION, ...
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-01
公開日2021-10-06
最終更新日2022-01-26
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NRA
DownloadVisualize
BU of 7nra by Molmil
The structure of the SBP TarP_Sse in complex with cinnamate
分子名称: HYDROCINNAMIC ACID, TRAP dicarboxylate transporter, DctP subunit
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-03
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NSW
DownloadVisualize
BU of 7nsw by Molmil
The structure of the SBP TarP_Csal in complex with coumarate
分子名称: 1,2-ETHANEDIOL, 4'-HYDROXYCINNAMIC ACID, MAGNESIUM ION, ...
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-08
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NTD
DownloadVisualize
BU of 7ntd by Molmil
The structure of the SBP TarP_Csal in complex with ferulate
分子名称: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, MAGNESIUM ION, SULFATE ION, ...
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-09
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7FBP
DownloadVisualize
BU of 7fbp by Molmil
FXIIa-cMCoFx1 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Coagulation factor XIIa light chain, cMCoFx1
著者Sengoku, T, Liu, W, de Veer, S.J, Huang, Y.H, Okada, C, Zdenek, C.N, Fry, B.G, Swedberg, J.E, Passioura, T, Craik, D.J, Suga, H, Ogata, K.
登録日2021-07-12
公開日2021-11-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献An Ultrapotent and Selective Cyclic Peptide Inhibitor of Human beta-Factor XIIa in a Cyclotide Scaffold.
J.Am.Chem.Soc., 143, 2021
7NTE
DownloadVisualize
BU of 7nte by Molmil
The structure of an open conformation of the SBP TarP_Csal
分子名称: MAGNESIUM ION, TRAP dicarboxylate transporter-DctP subunit
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-09
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NXF
DownloadVisualize
BU of 7nxf by Molmil
Structure of the fungal plasma membrane proton pump Pma1 in its auto-inhibited state - monomer unit
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
著者Heit, S, Geurts, M.M.G, Murphy, B.J, Corey, R, Mills, D.J, Kuehlbrandt, W, Bublitz, M.
登録日2021-03-18
公開日2021-11-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the hexameric fungal plasma membrane proton pump in its autoinhibited state.
Sci Adv, 7, 2021
7NY1
DownloadVisualize
BU of 7ny1 by Molmil
Structure of the fungal plasma membrane proton pump Pma1 in its auto-inhibited state - hexameric assembly
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
著者Heit, S, Geurts, M.M.G, Murphy, B.J, Corey, R, Mills, D.J, Kuehlbrandt, W, Bublitz, M.
登録日2021-03-19
公開日2021-11-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structure of the hexameric fungal plasma membrane proton pump in its autoinhibited state.
Sci Adv, 7, 2021
7OBM
DownloadVisualize
BU of 7obm by Molmil
Crystal structure of the human Prolyl Endopeptidase-Like protein short form (residues 90-727)
分子名称: Prolyl endopeptidase-like
著者Rosier, K, McDevitt, M.T, Brendan, J.F, Marcaida, M.J, Bingman, C.A, Pagliarini, D.J, Creemers, J.W.M, Smith, R.W, Mitochondrial Protein Partnership (MPP)
登録日2021-04-22
公開日2021-11-10
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Prolyl endopeptidase-like is a (thio)esterase involved in mitochondrial respiratory chain function.
Iscience, 24, 2021
7OEU
DownloadVisualize
BU of 7oeu by Molmil
Model of open pentamer of the Haliangium ochraceum encapsulin from symmetry expansion of icosahedral single particle reconstruction
分子名称: Haliangium ochraceum encapsulated ferritin, Linocin_M18 bacteriocin protein
著者Marles-Wright, J, Basle, A, Clarke, D.J, Ross, J.
登録日2021-05-04
公開日2022-02-09
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Pore dynamics and asymmetric cargo loading in an encapsulin nanocompartment.
Sci Adv, 8, 2022

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon