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PDB: 1200 results

5W7R
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BU of 5w7r by Molmil
Crystal structure of OxaC in complex with SAH and oxaline
Descriptor: (3E,7aR,12aS)-3-[(1H-imidazol-4-yl)methylidene]-6,12-dimethoxy-7a-(2-methylbut-3-en-2-yl)-7a,12-dihydro-1H,5H-imidazo[1 ',2':1,2]pyrido[2,3-b]indole-2,5(3H)-dione, OxaC, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
Deposit date:2017-06-20
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
5WER
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BU of 5wer by Molmil
Crystal Structure of TAPBPR and H2-Dd complex
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, CITRIC ACID, ...
Authors:Jiang, J.S, Natarajan, K, Boyd, L.F, Margulies, D.H.
Deposit date:2017-07-10
Release date:2017-10-18
Last modified:2019-08-28
Method:X-RAY DIFFRACTION (3.412 Å)
Cite:Crystal structure of a TAPBPR-MHC I complex reveals the mechanism of peptide editing in antigen presentation.
Science, 358, 2017
6D5Q
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BU of 6d5q by Molmil
Hexagonal thermolysin cryocooled to 100 K with 30% xylose as cryoprotectant
Descriptor: CALCIUM ION, LYSINE, Thermolysin, ...
Authors:Juers, D.H.
Deposit date:2018-04-19
Release date:2018-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.00016141 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6D5R
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BU of 6d5r by Molmil
Hexagonal thermolysin cryocooled to 100 K with 50% xylose as cryoprotectant
Descriptor: CALCIUM ION, LYSINE, Thermolysin, ...
Authors:Juers, D.H.
Deposit date:2018-04-19
Release date:2018-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.00002122 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6D5N
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BU of 6d5n by Molmil
Hexagonal thermolysin (295) in the presence of 50% xylose
Descriptor: CALCIUM ION, LYSINE, Thermolysin, ...
Authors:Juers, D.H.
Deposit date:2018-04-19
Release date:2018-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.00003672 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6D5U
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BU of 6d5u by Molmil
Hexagonal thermolysin cryocooled to 100 K with 50% methanol as cryoprotectant
Descriptor: CALCIUM ION, LYSINE, METHANOL, ...
Authors:Juers, D.H.
Deposit date:2018-04-19
Release date:2018-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.00009537 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6D81
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BU of 6d81 by Molmil
Structure of the Bovine p85a BH domain
Descriptor: Phosphatidylinositol 3-kinase regulatory subunit alpha, SULFATE ION
Authors:Moore, S.A, Marshall, J.D, Anderson, D.H.
Deposit date:2018-04-25
Release date:2018-05-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.248 Å)
Cite:Patient-derived mutations within the N-terminal domains of p85 alpha impact PTEN or Rab5 binding and regulation.
Sci Rep, 8, 2018
6D5O
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BU of 6d5o by Molmil
Hexagonal thermolysin (295 K) in the presence of 50% DMF
Descriptor: CALCIUM ION, DIMETHYLFORMAMIDE, LYSINE, ...
Authors:Juers, D.H.
Deposit date:2018-04-19
Release date:2018-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.00005221 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6D6F
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BU of 6d6f by Molmil
Triclinic lysozyme cryocooled to 100 K with 47% xylose as cryoprotectant
Descriptor: Lysozyme C, NITRATE ION, alpha-D-xylopyranose
Authors:Juers, D.H.
Deposit date:2018-04-20
Release date:2018-09-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6D6E
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BU of 6d6e by Molmil
Triclinic lysozyme (295 K) in the presence of 47% xylose
Descriptor: Lysozyme C, NITRATE ION
Authors:Juers, D.H.
Deposit date:2018-04-20
Release date:2018-09-19
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
4OIE
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BU of 4oie by Molmil
West Nile Virus Non-structural Protein NS1
Descriptor: GLYCEROL, NON-STRUCTURAL PROTEIN NS1
Authors:Edeling, M.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-01-19
Release date:2014-03-05
Last modified:2014-04-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis of Flavivirus NS1 assembly and antibody recognition.
Proc.Natl.Acad.Sci.USA, 111, 2014
5UUC
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BU of 5uuc by Molmil
Tetragonal thermolysin cryocooled to 100 K with 50% mpd as cryoprotectant
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
Authors:Juers, D.H.
Deposit date:2017-02-16
Release date:2017-03-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.60000932 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
4N0A
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BU of 4n0a by Molmil
Crystal structure of Lsm2-3-Pat1C complex from Saccharomyces cerevisiae
Descriptor: DNA topoisomerase 2-associated protein PAT1, U6 snRNA-associated Sm-like protein LSm2, U6 snRNA-associated Sm-like protein LSm3
Authors:Wu, D.H.
Deposit date:2013-10-01
Release date:2013-12-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Lsm2 and Lsm3 bridge the interaction of the Lsm1-7 complex with Pat1 for decapping activation
Cell Res., 24, 2014
4A8M
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BU of 4a8m by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*AP*AP*TP*CP)-3', ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
5WPU
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BU of 5wpu by Molmil
Crystal structure HpiC1 Y101S
Descriptor: 12-epi-hapalindole C/U synthase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION
Authors:Newmister, S.A, Li, S, Garcia-Borras, M, Sanders, J.N, Yang, S, Lowell, A.N, Yu, F, Smith, J.L, Williams, R.M, Houk, K.N, Sherman, D.H.
Deposit date:2017-08-07
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Structural basis of the Cope rearrangement and cyclization in hapalindole biogenesis.
Nat. Chem. Biol., 14, 2018
5WIS
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BU of 5wis by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
Descriptor: (3R,4S,5S,7R,9E,11S,12R)-12-ethyl-11-hydroxy-3,5,7,11-tetramethyl-2,8-dioxooxacyclododec-9-en-4-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranoside, 16S Ribosomal RNA, 23S ribosomal RNA, ...
Authors:Almutairi, M.M, Svetlov, M.S, Hansen, D.A, Khabibullina, N.F, Klepacki, D, Kang, H.Y, Sherman, D.H, Vazquez-Laslop, N, Polikanov, Y.S, Mankin, A.S.
Deposit date:2017-07-20
Release date:2018-02-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Co-produced natural ketolides methymycin and pikromycin inhibit bacterial growth by preventing synthesis of a limited number of proteins.
Nucleic Acids Res., 45, 2017
7O6H
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BU of 7o6h by Molmil
Crystal structure of Paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with tri-mannuronic acid
Descriptor: Alginate lyase (PL7), alpha-D-mannopyranuronic acid, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid
Authors:Fredslund, F, Welner, D.H, Wilkens, C.
Deposit date:2021-04-11
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structure of Paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with tri-mannuronic acid
To Be Published
6C6Q
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BU of 6c6q by Molmil
Crystal Structure of the Murine Norovirus VP1 P Domain in complex with the CD300lf Receptor
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CMRF35-like molecule 1, ...
Authors:Nelson, C.A, Fremont, D.H.
Deposit date:2018-01-19
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for murine norovirus engagement of bile acids and the CD300lf receptor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4A8Q
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BU of 4a8q by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*DTP*TP*CP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
4A8Y
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BU of 4a8y by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*TP*TP*TP*TP*CP*GP*CP*GP*TP*AP*AP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
4OIG
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BU of 4oig by Molmil
Dengue Virus Non-structural Protein NS1
Descriptor: Non-structural protein 1, NS1, SULFATE ION
Authors:Edeling, M.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-01-19
Release date:2014-03-05
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural basis of Flavivirus NS1 assembly and antibody recognition.
Proc.Natl.Acad.Sci.USA, 111, 2014
5WPS
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BU of 5wps by Molmil
Crystal structure HpiC1 Y101F
Descriptor: 1,2-ETHANEDIOL, 12-epi-hapalindole C/U synthase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Newmister, S.A, Li, S, Garcia-Borras, M, Sanders, J.N, Yang, S, Lowell, A.N, Yu, F, Smith, J.L, Williams, R.M, Houk, K.N, Sherman, D.H.
Deposit date:2017-08-07
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.389 Å)
Cite:Structural basis of the Cope rearrangement and cyclization in hapalindole biogenesis.
Nat. Chem. Biol., 14, 2018
5UUA
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BU of 5uua by Molmil
Tetragonal thermolysin cryocooled to 100 K with 50% xylose as cryoprotectant
Descriptor: CALCIUM ION, CHLORIDE ION, Thermolysin, ...
Authors:Juers, D.H.
Deposit date:2017-02-16
Release date:2017-03-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.60000384 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
5UU8
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BU of 5uu8 by Molmil
Tetragonal thermolysin cryocooled to 100 K with 30% xylose as cryoprotectant
Descriptor: CALCIUM ION, Thermolysin, ZINC ION, ...
Authors:Juers, D.H.
Deposit date:2017-02-16
Release date:2017-03-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
5UUD
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BU of 5uud by Molmil
Tetragonal thermolysin cryocooled to 100 K with 50% dmf as cryoprotectant
Descriptor: CALCIUM ION, CHLORIDE ION, DIMETHYLFORMAMIDE, ...
Authors:Juers, D.H.
Deposit date:2017-02-16
Release date:2017-03-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.60000348 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018

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