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PDB: 1151 results

2CNT
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BU of 2cnt by Molmil
RimI - Ribosomal S18 N-alpha-protein acetyltransferase in complex with CoenzymeA.
Descriptor: COENZYME A, GLYCEROL, MODIFICATION OF 30S RIBOSOMAL SUBUNIT PROTEIN S18, ...
Authors:Vetting, M.W, Bareich, D.C, Yu, M, Blanchard, J.S.
Deposit date:2006-05-23
Release date:2007-06-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Rimi from Salmonella Typhimurium Lt2, the Gnat Responsible for N{Alpha}- Acetylation of Ribosomal Protein S18.
Protein Sci., 17, 2008
6VQT
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BU of 6vqt by Molmil
Structure of a bacterial Atm1-family ABC exporter with MgADPVO4 bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATM1-type heavy metal exporter, MAGNESIUM ION, ...
Authors:Fan, C, Rees, D.C.
Deposit date:2020-02-05
Release date:2020-07-29
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:A structural framework for unidirectional transport by a bacterial ABC exporter.
Proc.Natl.Acad.Sci.USA, 117, 2020
4CPA
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BU of 4cpa by Molmil
REFINED CRYSTAL STRUCTURE OF THE POTATO INHIBITOR COMPLEX OF CARBOXYPEPTIDASE A AT 2.5 ANGSTROMS RESOLUTION
Descriptor: CARBOXYPEPTIDASE A, GLYCINE, METALLOCARBOXYPEPTIDASE INHIBITOR, ...
Authors:Lipscomb, W.N, Rees, D.C.
Deposit date:1982-03-24
Release date:1982-07-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Refined crystal structure of the potato inhibitor complex of carboxypeptidase A at 2.5 A resolution.
J.Mol.Biol., 160, 1982
4AOK
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BU of 4aok by Molmil
Conformational dynamics of aspartate alpha-decarboxylase active site revealed by protein-ligand complexes: 1-methyl-L-aspartate complex
Descriptor: ASPARTATE 1-DECARBOXYLASE ALPHA CHAIN, ASPARTATE 1-DECARBOXYLASE BETA CHAIN
Authors:Yorke, B.A, Monteiro, D.C.F, Pearson, A.R, Webb, M.E.
Deposit date:2012-03-28
Release date:2012-10-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational Dynamics of Aspartate Alpha Decarboxylase Active Site Revealed by Protein-Ligand Complexes
To be Published
5UA0
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BU of 5ua0 by Molmil
Dimeric crystal structure of HTPA reductase from arabidopsis thaliana
Descriptor: 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic, SULFATE ION
Authors:Keown, J.K, Pearce, F.G, Goldstone, D.C.
Deposit date:2016-12-18
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Plant DHDPR forms a dimer with unique secondary structure features that preclude higher-order assembly.
Biochem. J., 475, 2018
2BOF
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BU of 2bof by Molmil
Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with cellotetrose
Descriptor: ENDOGLUCANASE E-2, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Larsson, A.M, Bergfors, T, Dultz, E, Irwin, D.C, Roos, A, Driguez, H, Wilson, D.B, Jones, T.A.
Deposit date:2005-04-10
Release date:2005-10-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal Structure of Thermobifida Fusca Endoglucanase Cel6A in Complex with Substrate and Inhibitor: The Role of Tyrosine Y73 in Substrate Ring Distortion.
Biochemistry, 44, 2005
6W2G
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BU of 6w2g by Molmil
Crystal Structure of Y188G Variant of the Internal UBA Domain of HHR23A in Monoclinic Unit Cell
Descriptor: 1,2-ETHANEDIOL, UV excision repair protein RAD23 homolog A
Authors:Bowler, B.E, Zeng, B, Becht, D.C, Rothfuss, M, Sprang, S.R, Mou, T.-C.
Deposit date:2020-03-05
Release date:2021-03-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-Accuracy Prediction of Stabilizing Surface Mutations to the Three-Helix Bundle, UBA(1), with EmCAST.
J.Am.Chem.Soc., 145, 2023
6W2H
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BU of 6w2h by Molmil
Crystal Structure of the Internal UBA Domain of HHR23A
Descriptor: SULFATE ION, UV excision repair protein RAD23 homolog A
Authors:Bowler, B.E, Zeng, B, Becht, D.C, Rothfuss, M, Sprang, S.R, Mou, T.-C.
Deposit date:2020-03-05
Release date:2021-03-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Residual Structure in the Denatured State of the Fast-Folding UBA(1) Domain from the Human DNA Excision Repair Protein HHR23A.
Biochemistry, 61, 2022
6W2I
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BU of 6w2i by Molmil
Crystal Structure of Y188G Variant of the Internal UBA Domain of HHR23A
Descriptor: GLYCEROL, UV excision repair protein RAD23 homolog A
Authors:Bowler, B.E, Zeng, B, Becht, D.C, Rothfuss, M, Sprang, S.R, Mou, T.-C.
Deposit date:2020-03-05
Release date:2021-03-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:High-Accuracy Prediction of Stabilizing Surface Mutations to the Three-Helix Bundle, UBA(1), with EmCAST.
J.Am.Chem.Soc., 145, 2023
5U5I
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BU of 5u5i by Molmil
The dimeric crystal structure of the selenomethionine derivative of HTPA Reductase from Sellaginella moellendorffii
Descriptor: CALCIUM ION, HTPA Reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Keown, J.R, Goldstone, D.C, Pearce, F.G.
Deposit date:2016-12-06
Release date:2017-12-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Plant DHDPR forms a dimer with unique secondary structure features that preclude higher-order assembly.
Biochem. J., 475, 2018
2BF1
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BU of 2bf1 by Molmil
Structure of an unliganded and fully-glycosylated SIV gp120 envelope glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chen, B, Vogan, E.M, Gong, H, Skehel, J.J, Wiley, D.C, Harrison, S.C.
Deposit date:2004-12-02
Release date:2005-02-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structure of an Unliganded Simian Immunodeficiency Virus Gp120 Core
Nature, 433, 2005
2C3A
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BU of 2c3a by Molmil
Structure of unliganded HSV gD reveals a mechanism for receptor- mediated activation of virus entry
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCOPROTEIN D, ...
Authors:Krummenacher, C, Supekar, V.M, Whitbeck, J.C, Lazear, E, Connolly, S.A, Eisenberg, R.J, Cohen, G.H, Wiley, D.C, Carfi, A.
Deposit date:2005-10-05
Release date:2005-12-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of Unliganded Hsv Gd Reveals a Mechanism for Receptor-Mediated Activation of Virus Entry.
Embo J., 24, 2005
5VPW
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BU of 5vpw by Molmil
Nitrogenase Cp1 at pH 5
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (II) ION, FE(8)-S(7) CLUSTER, ...
Authors:Morrison, C.N, Spatzal, T, Rees, D.C.
Deposit date:2017-05-05
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Reversible Protonated Resting State of the Nitrogenase Active Site.
J. Am. Chem. Soc., 139, 2017
4BH5
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BU of 4bh5 by Molmil
LytM domain of EnvC, an activator of cell wall amidases in Escherichia coli
Descriptor: CHLORIDE ION, GLYCEROL, IODIDE ION, ...
Authors:Morlot, C, Peters, N.T, Yang, D.C, Uehara, T, Vernet, T, Bernhardt, T.G.
Deposit date:2013-03-29
Release date:2013-07-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structure-Function Analysis of the Lytm Domain of Envc, an Activator of Cell Wall Remodeling at the Escherichia Coli Division Site.
Mol.Microbiol., 89, 2013
4D2W
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BU of 4d2w by Molmil
Structure of MELK in complex with inhibitors
Descriptor: 4-bromo-N-(2,3,4,5-tetrahydro-1H-3-benzazepin-7-yl)benzamide, MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE
Authors:Johnson, C.N, Berdini, V, Beke, L, Bonnet, P, Brehmer, D, Coyle, J.E, Day, P.J, Frederickson, M, Freyne, E.J.E, Gilissen, R.A.H.J, Hamlett, C.C.F, Howard, S, Meerpoel, L, McMenamin, R, Patel, S, Rees, D.C, Sharff, A, Sommen, F, Wu, T, Linders, J.T.M.
Deposit date:2014-05-13
Release date:2014-10-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Fragment-Based Discovery of Type I Inhibitors of Maternal Embryonic Leucine Zipper Kinase
Acs Med.Chem.Lett., 6, 2015
6WA8
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BU of 6wa8 by Molmil
Crystal structure of the E. coli transcription termination factor Rho
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Transcription termination factor Rho
Authors:Fan, C, Rees, D.C.
Deposit date:2020-03-24
Release date:2020-09-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of the Escherichia coli transcription termination factor Rho.
Acta Crystallogr.,Sect.F, 76, 2020
5UWA
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BU of 5uwa by Molmil
Structure of E. coli phospholipid binding protein MlaC
Descriptor: (2S)-3-(2-aminoethoxy)propane-1,2-diyl dihexadecanoate, Probable phospholipid-binding protein MlaC
Authors:Bhabha, G, Ekiert, D.C.
Deposit date:2017-02-20
Release date:2017-04-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Architectures of Lipid Transport Systems for the Bacterial Outer Membrane.
Cell, 169, 2017
5V4H
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BU of 5v4h by Molmil
Ruthenium(II)(cymene)(chlorido)2-lysozyme adduct formed when ruthenium(II)(cymene)(bromido)2 underwent ligand exchange, resulting in one binding site
Descriptor: Lysozyme C, PARA-CYMENE RUTHENIUM CHLORIDE, SODIUM ION
Authors:Sullivan, M.P, Hartinger, C.G, Goldstone, D.C.
Deposit date:2017-03-09
Release date:2017-04-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:The metalation of hen egg white lysozyme impacts protein stability as shown by ion mobility mass spectrometry, differential scanning calorimetry, and X-ray crystallography.
Chem. Commun. (Camb.), 53, 2017
4AON
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BU of 4aon by Molmil
Conformational dynamics of aspartate alpha-decarboxylase active site revealed by protein-ligand complexes: 1-methyl-L-aspartate complex
Descriptor: ASPARTATE-ALPHA-DECARBOXYLASE ALPHA CHAIN, ASPARTATE-ALPHA-DECARBOXYLASE BETA CHAIN, GLUTAMIC ACID
Authors:Yorke, B.A, Monteiro, D.C.F, Pearson, A.R, Webb, M.E.
Deposit date:2012-03-29
Release date:2012-10-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational Dynamics of Aspartate Alpha Decarboxylase Active Site Revealed by Protein-Ligand Complexes
To be Published
5V89
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BU of 5v89 by Molmil
Structure of DCN4 PONY domain bound to CUL1 WHB
Descriptor: Cullin-1, DCN1-like protein 4
Authors:Guy, R.K, Schulman, B.A, Scott, D.C, Hammill, J.T.
Deposit date:2017-03-21
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Blocking an N-terminal acetylation-dependent protein interaction inhibits an E3 ligase.
Nat. Chem. Biol., 13, 2017
5UVN
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BU of 5uvn by Molmil
Structure of E. coli MCE protein PqiB, periplasmic domain
Descriptor: Paraquat-inducible protein B
Authors:Bhabha, G, Ekiert, D.C.
Deposit date:2017-02-20
Release date:2017-04-12
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Architectures of Lipid Transport Systems for the Bacterial Outer Membrane.
Cell, 169, 2017
2BOE
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BU of 2boe by Molmil
Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca
Descriptor: ENDOGLUCANASE E-2
Authors:Larsson, A.M, Bergfors, T, Dultz, E, Irwin, D.C, Roos, A, Driguez, H, Wilson, D.B, Jones, T.A.
Deposit date:2005-04-10
Release date:2005-10-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal Structure of Thermobifida Fusca Endoglucanase Cel6A in Complex with Substrate and Inhibitor: The Role of Tyrosine Y73 in Substrate Ring Distortion.
Biochemistry, 44, 2005
4CMW
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BU of 4cmw by Molmil
Crystal structure of Rv3378c
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Layre, E, Lee, H.J, Young, D.C, Martinot, A.J, Buter, J, Minnaard, A.J, Annand, J.W, Fortune, S.M, Snider, B.B, Matsunaga, I, Rubin, E.J, Alber, T, Moody, D.B.
Deposit date:2014-01-18
Release date:2014-02-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.209 Å)
Cite:Molecular Profiling of Mycobacterium Tuberculosis Identifies Tuberculosinyl Nucleoside Products of the Virulence-Associated Enzyme Rv3378C.
Proc.Natl.Acad.Sci.USA, 111, 2014
5V4G
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BU of 5v4g by Molmil
Ruthenium(II)(cymene)(chlorido)2-lysozyme adduct with two binding sites
Descriptor: Lysozyme C, PARA-CYMENE RUTHENIUM CHLORIDE, SODIUM ION
Authors:Sullivan, M.P, Hartinger, C.G, Goldstone, D.C.
Deposit date:2017-03-09
Release date:2017-04-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The metalation of hen egg white lysozyme impacts protein stability as shown by ion mobility mass spectrometry, differential scanning calorimetry, and X-ray crystallography.
Chem. Commun. (Camb.), 53, 2017
407D
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BU of 407d by Molmil
STRUCTURAL BASIS FOR RECOGNITION OF A-T AND T-A BASE PAIRS IN THE MINOR GROOVE OF B-DNA
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*CP*CP*AP*GP*TP*AP*CP*TP*GP*G)-3'), ~{N}-[5-[[5-[[5-[[3-[3-(dimethylamino)propylamino]-3-oxidanylidene-propyl]carbamoyl]-1-methyl-pyrrol-3-yl]carbamoyl]-1-methyl-pyrrol-3-yl]carbamoyl]-1-methyl-4-oxidanyl-pyrrol-3-yl]-1-methyl-imidazole-2-carboxamide
Authors:Rees, D.C.
Deposit date:1998-06-24
Release date:1998-10-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A structural basis for recognition of A.T and T.A base pairs in the minor groove of B-DNA.
Science, 282, 1998

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