Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1151 results

1LHP
DownloadVisualize
BU of 1lhp by Molmil
Crystal Structure of Pyridoxal Kinase from Sheep Brain
Descriptor: Pyridoxal kinase
Authors:Liang, D.C, Jiang, T, Li, M.H.
Deposit date:2002-04-17
Release date:2003-02-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of brain pyridoxal kinase, a novel member of the ribokinase superfamily
J.BIOL.CHEM., 277, 2002
8DBX
DownloadVisualize
BU of 8dbx by Molmil
CryoEM structure of partially oxidized MoFe-protein on ultrathin carbon
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Warmack, R.A, Rees, D.C.
Deposit date:2022-06-14
Release date:2023-03-08
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (1.92 Å)
Cite:Structural consequences of turnover-induced homocitrate loss in nitrogenase.
Nat Commun, 14, 2023
1LHR
DownloadVisualize
BU of 1lhr by Molmil
Crystal Structure of Pyridoxal Kinase complexed with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, POTASSIUM ION, Pyridoxal kinase, ...
Authors:Liang, D.C, Jiang, T, Li, M.H.
Deposit date:2002-04-17
Release date:2003-02-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of brain pyridoxal kinase, a novel member of the ribokinase superfamily
J.BIOL.CHEM., 277, 2002
1KF6
DownloadVisualize
BU of 1kf6 by Molmil
E. coli Quinol-Fumarate Reductase with Bound Inhibitor HQNO
Descriptor: 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE, ACETATE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Iverson, T.M, Luna-Chavez, C, Croal, L.R, Cecchini, G, Rees, D.C.
Deposit date:2001-11-19
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystallographic studies of the Escherichia coli quinol-fumarate reductase with inhibitors bound to the quinol-binding site.
J.Biol.Chem., 277, 2002
1LIA
DownloadVisualize
BU of 1lia by Molmil
CRYSTAL STRUCTURE OF R-PHYCOERYTHRIN FROM POLYSIPHONIA AT 2.8 A RESOLUTION
Descriptor: PHYCOCYANOBILIN, PHYCOUROBILIN, R-PHYCOERYTHRIN
Authors:Liang, D.C, Jiang, T, Chang, W.R.
Deposit date:1996-01-29
Release date:1997-07-29
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of R-phycoerythrin from Polysiphonia urceolata at 2.8 A resolution.
J.Mol.Biol., 262, 1996
1M2A
DownloadVisualize
BU of 1m2a by Molmil
Crystal structure at 1.5 Angstroms resolution of the wild type thioredoxin-like [2Fe-2S] ferredoxin from Aquifex aeolicus
Descriptor: FE2/S2 (INORGANIC) CLUSTER, SULFATE ION, ZINC ION, ...
Authors:Yeh, A.P, Ambroggio, X.I, Andrade, S.L.A, Einsle, O, Chatelet, C, Meyer, J, Rees, D.C.
Deposit date:2002-06-22
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution crystal structures of the wild type and Cys-55-->Ser and Cys-59-->Ser variants of the thioredoxin-like [2Fe-2S] ferredoxin from Aquifex aeolicus
J.Biol.Chem., 277, 2002
6IBG
DownloadVisualize
BU of 6ibg by Molmil
Bacteriophage G20c portal protein crystal structure for construct with intact N-terminus
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Portal protein
Authors:Bayfield, O.W, Klimuk, E, Winkler, D.C, Hesketh, E.L, Chechik, M, Cheng, N, Dykeman, E.C, Minakhin, L, Ranson, N.A, Severinov, K, Steven, A.C, Antson, A.A.
Deposit date:2018-11-30
Release date:2019-01-23
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
7MBZ
DownloadVisualize
BU of 7mbz by Molmil
Outward facing conformation of the MetNI methionine ABC transporter in complex with lipo-MetQ
Descriptor: ABC transporter, ATP-binding protein, permease protein, ...
Authors:Sharaf, N.G, Rees, D.C.
Deposit date:2021-04-01
Release date:2021-09-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Characterization of the ABC methionine transporter from Neisseria meningitidis reveals that lipidated MetQ is required for interaction.
Elife, 10, 2021
7MC0
DownloadVisualize
BU of 7mc0 by Molmil
Inward facing conformation of the MetNI methionine ABC transporter
Descriptor: ABC transporter, ATP-binding protein, permease protein
Authors:Sharaf, N.G, Rees, D.C.
Deposit date:2021-04-01
Release date:2021-09-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Characterization of the ABC methionine transporter from Neisseria meningitidis reveals that lipidated MetQ is required for interaction.
Elife, 10, 2021
1HZX
DownloadVisualize
BU of 1hzx by Molmil
CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEPTANE-1,2,3-TRIOL, MERCURY (II) ION, ...
Authors:Teller, D.C, Okada, T, Behnke, C.A, Palczewski, K, Stenkamp, R.E.
Deposit date:2001-01-26
Release date:2001-07-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Advances in determination of a high-resolution three-dimensional structure of rhodopsin, a model of G-protein-coupled receptors (GPCRs).
Biochemistry, 40, 2001
1I0S
DownloadVisualize
BU of 1i0s by Molmil
ARCHAEOGLOBUS FULGIDUS FERRIC REDUCTASE COMPLEX WITH NADP+
Descriptor: CONSERVED HYPOTHETICAL PROTEIN, FLAVIN MONONUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Chiu, H.-J, Johnson, E, Schroder, I, Rees, D.C.
Deposit date:2001-01-29
Release date:2001-05-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of a novel ferric reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus and its complex with NADP+.
Structure, 9, 2001
1I0R
DownloadVisualize
BU of 1i0r by Molmil
CRYSTAL STRUCTURE OF FERRIC REDUCTASE FROM ARCHAEOGLOBUS FULGIDUS
Descriptor: CONSERVED HYPOTHETICAL PROTEIN, FLAVIN MONONUCLEOTIDE
Authors:Chiu, H.-J, Johnson, E, Schroder, I, Rees, D.C.
Deposit date:2001-01-29
Release date:2001-05-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of a novel ferric reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus and its complex with NADP+.
Structure, 9, 2001
7MSO
DownloadVisualize
BU of 7mso by Molmil
Crystal Structure of Polo Box Domain in Complex with Cyclic Peptide Inhibitor
Descriptor: Cyclic Peptide Inhibitor ZO1-GLN-SER-TPO-45W-MLL, Serine/threonine-protein kinase PLK1
Authors:Lim, D.C, Yaffe, M.B.
Deposit date:2021-05-11
Release date:2022-03-02
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Novel Macrocyclic Peptidomimetics Targeting the Polo-Box Domain of Polo-Like Kinase 1.
J.Med.Chem., 65, 2022
1IXA
DownloadVisualize
BU of 1ixa by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF THE FIRST EGF-LIKE MODULE OF HUMAN FACTOR IX: COMPARISON WITH EGF AND TGF-A
Descriptor: EGF-LIKE MODULE OF HUMAN FACTOR IX
Authors:Baron, M, Norman, D.G, Harvey, T.S, Hanford, P.A, Mayhew, M, Tse, A.G.D, Brownlee, G.G, Campbell, I.D.C.
Deposit date:1991-11-14
Release date:1993-10-31
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:The three-dimensional structure of the first EGF-like module of human factor IX: comparison with EGF and TGF-alpha.
Protein Sci., 1, 1992
1J8H
DownloadVisualize
BU of 1j8h by Molmil
Crystal Structure of a Complex of a Human alpha/beta-T cell Receptor, Influenza HA Antigen Peptide, and MHC Class II Molecule, HLA-DR4
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ HA1 PEPTIDE CHAIN, ...
Authors:Hennecke, J, Wiley, D.C.
Deposit date:2001-05-21
Release date:2002-03-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a complex of the human alpha/beta T cell receptor (TCR) HA1.7, influenza hemagglutinin peptide, and major histocompatibility complex class II molecule, HLA-DR4 (DRA*0101 and DRB1*0401): insight into TCR cross-restriction and alloreactivity.
J.Exp.Med., 195, 2002
6IYW
DownloadVisualize
BU of 6iyw by Molmil
Crystal sturucture of L,D-transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with Imipenem adduct
Descriptor: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, GLYCEROL, L,D-transpeptidase 2
Authors:Li, D.F, Zhao, F, Wang, D.C.
Deposit date:2018-12-17
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The 1-beta-methyl group confers a lower affinity of l,d-transpeptidase LdtMt2 for ertapenem than for imipenem.
Biochem. Biophys. Res. Commun., 510, 2019
7NEV
DownloadVisualize
BU of 7nev by Molmil
Structure of the hemiacetal complex between the SARS-CoV-2 Main Protease and Leupeptin
Descriptor: 3C-like proteinase, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Guenther, S, Reinke, P.Y.A, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H.M, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashhour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Xavier, P.L, Ullah, N, Andaleeb, H, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Zaitsev-Doyle, J.J, Rogers, C, Gieseler, H, Melo, D, Monteiro, D.C.F, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schluenzen, F, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Sun, X, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2021-02-05
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
7RRM
DownloadVisualize
BU of 7rrm by Molmil
Structure of the human TMED1 (p24gamma1) Golgi dynamics Domain
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Transmembrane emp24 domain-containing protein 1
Authors:Mota, D.C.A.M, Cardoso, I.A, Mori, R.M, Mendes, L.F.S, Nonato, M.C, Filho, A.J.C.
Deposit date:2021-08-10
Release date:2021-10-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural and thermodynamic analyses of human TMED1 (p24 gamma 1) Golgi dynamics.
Biochimie, 192, 2022
1IM9
DownloadVisualize
BU of 1im9 by Molmil
Crystal structure of the human natural killer cell inhibitory receptor KIR2DL1 bound to its MHC ligand HLA-Cw4
Descriptor: Beta-2 microglobulin, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, CW-4 CW*0401 ALPHA CHAIN, ...
Authors:Fan, Q.R, Long, E.O, Wiley, D.C.
Deposit date:2001-05-10
Release date:2001-05-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the human natural killer cell inhibitory receptor KIR2DL1-HLA-Cw4 complex.
Nat.Immunol., 2, 2001
6JFL
DownloadVisualize
BU of 6jfl by Molmil
Nucleotide-free Mitofusin2 (MFN2)
Descriptor: CALCIUM ION, GLYCEROL, Mitofusin-2,cDNA FLJ57997, ...
Authors:Li, Y.J, Cao, Y.L, Feng, J.X, Qi, Y.B, Meng, S.X, Yang, J.F, Zhong, Y.T, Kang, S.S, Chen, X.X, Lan, L, Luo, L, Yu, B, Chen, S.D, Chan, D.C, Hu, J.J, Gao, S.
Deposit date:2019-02-10
Release date:2019-11-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.806 Å)
Cite:Structural insights of human mitofusin-2 into mitochondrial fusion and CMT2A onset.
Nat Commun, 10, 2019
6JFM
DownloadVisualize
BU of 6jfm by Molmil
Mitofusin2 (MFN2)_T111D
Descriptor: ACETATE ION, CALCIUM ION, Mitofusin-2,Mitofusin-2
Authors:Li, Y.J, Cao, Y.L, Feng, J.X, Qi, Y.B, Meng, S.X, Yang, J.F, Zhong, Y.T, Kang, S.S, Chen, X.X, Lan, L, Luo, L, Yu, B, Chen, S.D, Chan, D.C, Hu, J.J, Gao, S.
Deposit date:2019-02-10
Release date:2019-11-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural insights of human mitofusin-2 into mitochondrial fusion and CMT2A onset.
Nat Commun, 10, 2019
5HDK
DownloadVisualize
BU of 5hdk by Molmil
Crystal structure of heat shock factor 2-DBD
Descriptor: CHLORIDE ION, Heat shock factor protein 2, POTASSIUM ION, ...
Authors:Feng, H, Liu, W, Wang, D.C.
Deposit date:2016-01-05
Release date:2017-01-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:HSF1-DBD crystal structure
To Be Published
6JMP
DownloadVisualize
BU of 6jmp by Molmil
Crystal Structure of a Non-hemolytic Pneumolysin from Streptococcus pneumoniae strain ST306
Descriptor: GLYCEROL, Thiol-activated cytolysin
Authors:Badgujar, D.C, Bhaumik, P.
Deposit date:2019-03-13
Release date:2020-09-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into loss of function of a pore forming toxin and its role in pneumococcal adaptation to an intracellular lifestyle.
Plos Pathog., 16, 2020
5HDN
DownloadVisualize
BU of 5hdn by Molmil
Crystal structure of heat shock factor1-DBD complex with ds-DNA and TtT
Descriptor: CITRIC ACID, DNA (5'-D(*GP*GP*TP*TP*CP*TP*AP*GP*AP*AP*CP*C)-3'), Heat shock factor protein 1, ...
Authors:Feng, H, Liu, W, Wang, D.C.
Deposit date:2016-01-05
Release date:2017-01-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:HSF1-DBD crystal structure
To Be Published
5HSM
DownloadVisualize
BU of 5hsm by Molmil
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS MARR FAMILY PROTEIN RV2887
Descriptor: SULFATE ION, Uncharacterized HTH-type transcriptional regulator Rv2887
Authors:Gao, Y.R, Li, D.F, Wang, D.C, Bi, L.J.
Deposit date:2016-01-26
Release date:2017-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of the regulatory mechanism of MarR protein Rv2887 in M. tuberculosis
Sci Rep, 7, 2017

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon