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PDB: 22297 results

2HAR
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BU of 2har by Molmil
Crystal structure of VDR LBD in complex with 2 alpha-(3-hydroxy-1-propoxy) calcitriol
Descriptor: 2ALPHA-(3-HYDROXYPROPOXY)-1ALPHA,25-DIHYDROXYVITAMIN D3, Vitamin D3 receptor
Authors:Hourai, S, Rochel, N, Moras, D.
Deposit date:2006-06-13
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing a Water Channel near the A-Ring of Receptor-Bound 1alpha,25-Dihydroxyvitamin D3 with Selected 2alpha-Substituted Analogues
J.Med.Chem., 49, 2006
2H25
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BU of 2h25 by Molmil
Solution Structure of Maltose Binding Protein complexed with beta-cyclodextrin
Descriptor: Maltose-binding periplasmic protein
Authors:Xu, Y, Lin, Z, Zheng, Y, Yang, D.
Deposit date:2006-05-18
Release date:2006-10-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A new strategy for structure determination of large proteins in solution without deuteration
Nat.Methods, 3, 2006
2HBX
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BU of 2hbx by Molmil
Crystal Structure of alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde-Decarboxylase (ACMSD)
Descriptor: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, COBALT (II) ION
Authors:Martynowski, D, Eyobo, Y, Li, T, Yang, K, Liu, A, Zhang, H.
Deposit date:2006-06-14
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of alpha-Amino-beta-carboxymuconate-epsilon-semialdehyde Decarboxylase: Insight into the Active Site and Catalytic Mechanism of a Novel Decarboxylation Reaction.
Biochemistry, 45, 2006
5UKA
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BU of 5uka by Molmil
Salmonella typhimurium AhpC E49Q mutant
Descriptor: Alkyl hydroperoxide reductase subunit C, CHLORIDE ION, POTASSIUM ION, ...
Authors:Perkins, A, Nelson, K, Parsonage, D, Poole, L, Karplus, P.A.
Deposit date:2017-01-20
Release date:2018-01-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Experimentally Dissecting the Origins of Peroxiredoxin Catalysis.
Antioxid.Redox Signal., 28, 2018
3FZU
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BU of 3fzu by Molmil
IgG1 Fab characterized by H/D exchange
Descriptor: immunoglobulin IgG1 Fab, heavy chain, light chain
Authors:Arndt, J, Houde, D, Domeier, W, Berkowitz, S, Engen, J.R.
Deposit date:2009-01-26
Release date:2009-03-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Characterization of IgG1 conformation and conformational dynamics by hydrogen/deuterium exchange mass spectrometry.
Anal Chem, 81, 2009
7Z7W
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BU of 7z7w by Molmil
REP-related Chom18 variant with double GC base pairing
Descriptor: Chom18-GC DNA, STRONTIUM ION
Authors:Svoboda, J, Schneider, B, Berdar, D, Kolenko, P.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Conformation-based refinement of 18-mer DNA structures.
Acta Crystallogr D Struct Biol, 79, 2023
2GIY
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BU of 2giy by Molmil
Crystal Structure of the C-terminal domain of the HSV-1 gE ectodomain
Descriptor: Glycoprotein E
Authors:Sprague, E.R, Wang, C, Baker, D, Bjorkman, P.J.
Deposit date:2006-03-29
Release date:2006-05-30
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal Structure of the HSV-1 Fc Receptor Bound to Fc Reveals a Mechanism for Antibody Bipolar Bridging.
Plos Biol., 4, 2006
7Z58
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BU of 7z58 by Molmil
Crystal structure of human Cathepsin L in complex with covalently bound Calpeptin
Descriptor: 1,2-ETHANEDIOL, Calpeptin, Cathepsin L, ...
Authors:Reinke, P.Y.A, Falke, S, Lieske, J, Ewert, W, Loboda, J, Rahmani Mashhour, A, Hauser, M, Karnicar, K, Usenik, A, Lindic, N, Lach, M, Boehler, H, Beck, T, Cox, R, Chapman, H.N, Hinrichs, W, Turk, D, Guenther, S, Meents, A.
Deposit date:2022-03-08
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Calpeptin is a potent cathepsin inhibitor and drug candidate for SARS-CoV-2 infections.
Commun Biol, 6, 2023
7Z3T
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BU of 7z3t by Molmil
Crystal structure of apo human Cathepsin L
Descriptor: 1,2-ETHANEDIOL, Cathepsin L, DI(HYDROXYETHYL)ETHER, ...
Authors:Reinke, P.Y.A, Falke, S, Lieske, J, Ewert, W, Loboda, J, Rahmani Mashhour, A, Hauser, M, Karnicar, K, Usenik, A, Lindic, N, Lach, M, Boehler, H, Beck, T, Cox, R, Chapman, H.N, Hinrichs, W, Turk, D, Guenther, S, Meents, A.
Deposit date:2022-03-02
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Calpeptin is a potent cathepsin inhibitor and drug candidate for SARS-CoV-2 infections.
Commun Biol, 6, 2023
7Z82
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BU of 7z82 by Molmil
REP-related Chom18 variant with double AG mismatch
Descriptor: Chom18-AG DNA, STRONTIUM ION
Authors:Svoboda, J, Kolenko, P, Berdar, D, Schneider, B.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Conformation-based refinement of 18-mer DNA structures.
Acta Crystallogr D Struct Biol, 79, 2023
7Z6D
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BU of 7z6d by Molmil
X-ray structure of the adduct obtained upon reaction of [Rh2(OCOCH3)(OCOCF3)3] with RNase A (1)
Descriptor: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), ACETATE ION, ...
Authors:Loreto, D, Merlino, A.
Deposit date:2022-03-11
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins
Dalton Trans, 51, 2022
2GXS
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BU of 2gxs by Molmil
HERA N-terminal domain in complex with AMP, crystal form 2
Descriptor: ADENOSINE MONOPHOSPHATE, CALCIUM ION, GLYCEROL, ...
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2006-05-09
Release date:2006-08-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain.
J.Mol.Biol., 351, 2006
2H5X
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BU of 2h5x by Molmil
RuvA from Mycobacterium tuberculosis
Descriptor: GLYCEROL, Holliday junction ATP-dependent DNA helicase ruvA
Authors:Prabu, J.R, Thamotharan, S, Khanduja, J.S, Alipio, E.Z, Kim, C.Y, Waldo, G.S, Terwilliger, T.C, Segelke, B, Lekin, T, Toppani, D, Hung, L.W, Yu, M, Bursey, E, Muniyappa, K, Chandra, N.R, Vijayan, M.
Deposit date:2006-05-28
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of Mycobacterium tuberculosis RuvA, a protein involved in recombination.
ACTA CRYSTALLOGR.,SECT.F, 62, 2006
5V0S
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BU of 5v0s by Molmil
Crystal structure of the ACT domain of prephenate dehydrogenase tyrA from Bacillus anthracis
Descriptor: CALCIUM ION, Prephenate dehydrogenase, SULFATE ION
Authors:Shabalin, I.G, Hou, J, Cymborowski, M.T, Otwinowski, Z, Kwon, K, Christendat, D, Gritsunov, A, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-02-28
Release date:2017-03-08
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural and biochemical analysis of Bacillus anthracis prephenate dehydrogenase reveals an unusual mode of inhibition by tyrosine via the ACT domain.
Febs J., 287, 2020
2GJS
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BU of 2gjs by Molmil
The crystal structure of human RRAD in complex with GDP
Descriptor: GTP-binding protein RAD, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Turnbull, A.P, Yang, X, Soundararajan, M, Schoch, G, Debreczeni, J, Elkins, J.M, Gileadi, C, Berridge, G, Pantic, N, Burgess, N, Smee, C.E.A, Bray, J, von Delft, F, Weigelt, J, Edwards, A, Arrowsmith, C, Sundstrom, M, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2006-03-31
Release date:2006-04-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of human RRAD in complex with GDP
To be Published
2GK9
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BU of 2gk9 by Molmil
Human Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma
Descriptor: phosphatidylinositol-4-phosphate 5-kinase, type II, gamma
Authors:Uppenberg, J, Hogbom, M, Ogg, D, Arrowsmith, C, Berglund, H, Collins, R, Ehn, M, Flodin, S, Flores, A, Graslund, S, Holmberg-Schiavone, L, Edwards, A, Hammarstrom, M, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Hallberg, B.M, Structural Genomics Consortium (SGC)
Deposit date:2006-03-31
Release date:2006-05-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Human Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma
To be Published
7Z7Z
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BU of 7z7z by Molmil
REP-related Chom18 variant with double TA base pair
Descriptor: Chom18-TA DNA, STRONTIUM ION
Authors:Svoboda, J, Schneider, B, Berdar, D, Kolenko, P.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Conformation-based refinement of 18-mer DNA structures.
Acta Crystallogr D Struct Biol, 79, 2023
4AEZ
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BU of 4aez by Molmil
Crystal Structure of Mitotic Checkpoint Complex
Descriptor: MITOTIC SPINDLE CHECKPOINT COMPONENT MAD2, MITOTIC SPINDLE CHECKPOINT COMPONENT MAD3, WD REPEAT-CONTAINING PROTEIN SLP1
Authors:Kulkarni, K.A, Chao, W.C.H, Zhang, Z, Barford, D.
Deposit date:2012-01-13
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Mitotic Checkpoint Complex
Nature, 484, 2012
7Z7U
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BU of 7z7u by Molmil
REP-related Chom18 variant with double CG base pair
Descriptor: Chom18-CG DNA, STRONTIUM ION
Authors:Svoboda, J, Kolenko, P, Berdar, D, Schneider, B.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Conformation-based refinement of 18-mer DNA structures.
Acta Crystallogr D Struct Biol, 79, 2023
3G9Q
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BU of 3g9q by Molmil
Crystal structure of the FhuD fold-family BSU3320, a periplasmic binding protein component of a Fep/Fec-like ferrichrome ABC transporter from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR577A
Descriptor: Ferrichrome-binding protein
Authors:Forouhar, F, Neely, H, Seetharaman, J, Janjua, H, Mao, L, Xiao, R, Ciccosanti, C, Foote, E.L, Lee, D, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-02-13
Release date:2009-03-03
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the FhuD fold-family BSU3320, a periplasmic binding protein component of a Fep/Fec-like ferrichrome ABC transporter from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR577A.
To be Published
7Z7L
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BU of 7z7l by Molmil
REP-related Chom18 variant with double AC mismatch
Descriptor: Chom18-AC DNA, STRONTIUM ION
Authors:Svoboda, J, Schneider, B, Berdar, D, Kolenko, P.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformation-based refinement of 18-mer DNA structures.
Acta Crystallogr D Struct Biol, 79, 2023
7Z7Y
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BU of 7z7y by Molmil
REP-related Chom18 variant with double GT mismatch
Descriptor: Chom18-GT DNA, STRONTIUM ION
Authors:Svoboda, J, Schneider, B, Berdar, D, Kolenko, P.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Conformation-based refinement of 18-mer DNA structures.
Acta Crystallogr D Struct Biol, 79, 2023
7Z7K
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BU of 7z7k by Molmil
REP-related Chom18 variant with double AT base pairing
Descriptor: Chom18-AT DNA, STRONTIUM ION
Authors:Svoboda, J, Schneider, B, Berdar, D, Kolenko, P.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Conformation-based refinement of 18-mer DNA structures.
Acta Crystallogr D Struct Biol, 79, 2023
7Z7M
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BU of 7z7m by Molmil
REP-related Chom18 variant with double CC mismatch
Descriptor: Chom18-CC DNA, STRONTIUM ION
Authors:Svoboda, J, Schneider, B, Berdar, D, Kolenko, P.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Conformation-based refinement of 18-mer DNA structures.
Acta Crystallogr D Struct Biol, 79, 2023
4AAU
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BU of 4aau by Molmil
ATP-triggered molecular mechanics of the chaperonin GroEL
Descriptor: 60 KDA CHAPERONIN, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Clare, D.K, Vasishtan, D, Stagg, S, Quispe, J, Farr, G.W, Topf, M, Horwich, A.L, Saibil, H.R.
Deposit date:2011-12-05
Release date:2012-12-12
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:ATP-Triggered Conformational Changes Delineate Substrate-Binding and -Folding Mechanics of the Groel Chaperonin.
Cell(Cambridge,Mass.), 149, 2012

223790

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