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PDB: 22297 件

7Z11
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Structure of substrate bound DRG1 (AFG2)
分子名称: ATPase family gene 2 protein, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, peptide substrate
著者Prattes, M, Grishkovskaya, I, Bergler, H, Haselbach, D.
登録日2022-02-24
公開日2022-09-21
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1.
Nat.Struct.Mol.Biol., 29, 2022
3F9R
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Crystal Structure of Trypanosoma Brucei phosphomannosemutase, TB.10.700.370
分子名称: MAGNESIUM ION, Phosphomannomutase, SULFATE ION
著者Wernimont, A.K, Lam, A, Ali, A, Lin, Y.H, Guther, L, Shamshad, A, MacKenzie, F, Bandini, G, Kozieradzki, I, Cossar, D, Zhao, Y, Schapira, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Ferguson, M.A.J, Hui, R, Qiu, W, Structural Genomics Consortium (SGC)
登録日2008-11-14
公開日2009-03-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of Trypanosoma Brucei phosphomannosemutase, TB.10.700.370
To be Published
2J1T
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Structure of a Streptococcus pneumoniae fucose binding module in complex with the Lewis Y antigen
分子名称: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Boraston, A.B, Wang, D, Burke, R.D.
登録日2006-08-15
公開日2006-09-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor
J.Biol.Chem., 281, 2006
3SEW
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Zn-mediated Polymer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form I)
分子名称: CHLORIDE ION, GLYCEROL, Maltose-binding periplasmic protein, ...
著者Zhao, M, Soriaga, A.B, Laganowsky, A, Sawaya, M.R, Cascio, D, Yeates, T.O.
登録日2011-06-11
公開日2011-09-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3S9C
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Russell's viper venom serine proteinase, RVV-V in complex with the fragment (residues 1533-1546) of human factor V
分子名称: ACETATE ION, Coagulation factor V, Vipera russelli proteinase RVV-V gamma, ...
著者Nakayama, D, Ben Ammar, Y, Takeda, S.
登録日2011-06-01
公開日2011-09-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of coagulation factor V recognition for cleavage by RVV-V
Febs Lett., 585, 2011
7YWJ
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Crystal structure of an engineered TycA variant, TycA pPLA (L313P)
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, SULFATE ION, ...
著者Mittl, P, Camus, A, Truong, G, Markert, G, Hilvert, D.
登録日2022-02-14
公開日2022-09-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.749 Å)
主引用文献Reprogramming Nonribosomal Peptide Synthetases for Site-Specific Insertion of alpha-Hydroxy Acids.
J.Am.Chem.Soc., 144, 2022
2J1U
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Structure of a Streptococcus pneumoniae fucose binding module in complex with the blood group A-tetrasaccharide
分子名称: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Boraston, A.B, Wang, D, Burke, R.D.
登録日2006-08-15
公開日2006-09-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor
J.Biol.Chem., 281, 2006
5TTH
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Heterodimeric SpyCatcher/SpyTag-fused zebrafish TRAP1 in ATP/ADP-hybrid state
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, C-terminal SpyCatcher fusion of wildtype zebrafish TNF receptor-associated protein 1, ...
著者Elnatan, D, Betegon, M, Liu, Y, Agard, D.A, Northeast Structural Genomics Consortium (NESG)
登録日2016-11-03
公開日2017-08-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Symmetry broken and rebroken during the ATP hydrolysis cycle of the mitochondrial Hsp90 TRAP1.
Elife, 6, 2017
7Z7R
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Complex I from E. coli, LMNG-purified, Apo, Open-ready state
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
著者Kravchuk, V, Kampjut, D, Sazanov, L.
登録日2022-03-16
公開日2022-09-21
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
5U9F
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3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Demo, G, Svidritskiy, E, Madireddy, R, Diaz-Avalos, R, Grant, T, Grigorieff, N, Sousa, D, Korostelev, A.A.
登録日2016-12-16
公開日2017-03-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mechanism of ribosome rescue by ArfA and RF2.
Elife, 6, 2017
2J7J
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Invariance of the zinc finger module: a comparison of the free structure with those in nucleic-acid complexes
分子名称: SULFATE ION, TRANSCRIPTION FACTOR IIIA, ZINC ION
著者Lu, D, Klug, A.
登録日2006-10-10
公開日2007-10-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Invariance of the Zinc Finger Module: A Comparison of the Free Structure with Those in Nucleic-Acid Complexes.
Proteins, 67, 2007
5TVX
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Crystal structure of mitochondrial Hsp90 (TRAP1) with ATP in absence of Mg, fully hydrolyzed
分子名称: ADENOSINE-5'-DIPHOSPHATE, TNF receptor-associated protein 1
著者Elnatan, D, Betegon, M, Agard, D.A.
登録日2016-11-10
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Symmetry broken and rebroken during the ATP hydrolysis cycle of the mitochondrial Hsp90 TRAP1.
Elife, 6, 2017
2JJW
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Structure of human signal regulatory protein (sirp) gamma
分子名称: SIGNAL REGULATORY PROTEIN GAMMA
著者Hatherley, D, Graham, S.C, Turner, J, Harlos, K, Stuart, D.I, Barclay, A.N.
登録日2008-04-22
公開日2008-08-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Paired Receptor Specificity Explained by Structures of Signal Regulatory Proteins Alone and Complexed with Cd47.
Mol.Cell, 31, 2008
2JKM
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Focal Adhesion Kinase catalytic domain in complex with bis-anilino pyrimidine inhibitor
分子名称: 2-{[5-CHLORO-2-({(1E,4R)-2-METHOXY-4-[(3R)-3-(METHYLAMINO)PYRROLIDIN-1-YL]CYCLOHEXA-2,5-DIEN-1-YLIDENE}AMINO)PYRIMIDIN-4-YL]AMINO}-N-(1-METHYLETHYL)BENZENESULFONAMIDE, FOCAL ADHESION KINASE 1
著者Lietha, D, Eck, M.J.
登録日2008-08-28
公開日2008-09-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystal Structures of the Fak Kinase in Complex with Tae226 and Related Bis-Anilino Pyrimidine Inhibitors Reveal a Helical Dfg Conformation.
Plos One, 3, 2008
5TPP
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BU of 5tpp by Molmil
Crystal Structure of DH270.5 (unliganded) from the DH270 Broadly Neutralizing N332-glycan Dependent Lineage
分子名称: CITRIC ACID, DH270.5 Fab heavy chain, DH270.5 Fab light chain, ...
著者Fera, D, Harrison, S.C.
登録日2016-10-20
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Staged induction of HIV-1 glycan-dependent broadly neutralizing antibodies.
Sci Transl Med, 9, 2017
5TYS
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X-ray crystal structure of wild type HIV-1 protease in complex with GRL-142
分子名称: (3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl [(2S,3R)-4-[{[2-(cyclopropylamino)-1,3-benzothiazol-6-yl]sulfonyl}(2-methylpropyl)amino]-1-(3,5-difluorophenyl)-3-hydroxybutan-2-yl]carbamate, Protease
著者Yedidi, R.S, Hayashi, H, Aoki, M, Das, D, Ghosh, A.K, Mitsuya, H.
登録日2016-11-21
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.007 Å)
主引用文献A novel central nervous system-penetrating protease inhibitor overcomes human immunodeficiency virus 1 resistance with unprecedented aM to pM potency.
Elife, 6, 2017
8ARC
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Heterologous Complex of Aeromonas hydrophila Type III secretion substrate AscX with Photorhabdus luminescens subsp. laumondii LscY
分子名称: AscX, BROMIDE ION, Type III secretion protein SctY
著者Gilzer, D, Niemann, H.H.
登録日2022-08-16
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The type III secretion chaperone SctY may shield the hydrophobic export gate-binding C-terminus of its substrate SctX.
Acta Crystallogr D Struct Biol, 79, 2023
8ADF
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X-ray crystal structure of PPAR gamma ligand binding domain in complex with CZ39
分子名称: (2R)-3-(4-bromophenyl)-2-(3-hydroxyphenyl)-4-oxidanyl-2H-furan-5-one, Peroxisome proliferator-activated receptor gamma
著者Capelli, D, Montanari, R, Pochetti, G, Meneghetti, F, Villa, S.
登録日2022-07-08
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Biological Screening and Crystallographic Studies of Hydroxy gamma-Lactone Derivatives to Investigate PPAR gamma Phosphorylation Inhibition.
Biomolecules, 13, 2023
8AJ2
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structure of the ordered core of Knr4 (loop 189-217 deleted)
分子名称: Structured core of Knr4
著者Caisso, A, Donker, E.I.M, Maveyraud, L, Zerbib, D.
登録日2022-07-27
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Conserved Yeast Protein Knr4 Involved in Cell Wall Integrity Is a Multi-domain Intrinsically Disordered Protein.
J.Mol.Biol., 435, 2023
8ARB
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Heterologous Complex of shortened Aeromonas hydrophila Type III secretion substrate AscX with Yersinia enterocolitica chaperone YscY
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AscX, Chaperone protein YscY, ...
著者Gilzer, D, Flottmann, F, Niemann, H.H.
登録日2022-08-16
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献The type III secretion chaperone SctY may shield the hydrophobic export gate-binding C-terminus of its substrate SctX.
Acta Crystallogr D Struct Biol, 79, 2023
8ARA
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Heterologous Complex of Aeromonas hydrophila Type III secretion substrate AscX with Yersinia enterocolitica chaperone YscY
分子名称: ACETATE ION, AscX, CHLORIDE ION, ...
著者Gilzer, D, Kowal, J.L, Niemann, H.H.
登録日2022-08-16
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The type III secretion chaperone SctY may shield the hydrophobic export gate-binding C-terminus of its substrate SctX.
Acta Crystallogr D Struct Biol, 79, 2023
3WG2
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Crystal structure of Agrocybe cylindracea galectin mutant (N46A)
分子名称: Galactoside-binding lectin, TRIETHYLENE GLYCOL
著者Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R.
登録日2013-07-25
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity.
Febs Lett., 587, 2013
2JGT
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Low resolution structure of SPT
分子名称: SERINE PALMITOYLTRANSFERASE
著者Yard, B.A, Carter, L.G, Johnson, K.A, Overton, I.M, Mcmahon, S.A, Dorward, M, Liu, H, Puech, D, Oke, M, Barton, G.J, Naismith, J.H, Campopiano, D.J.
登録日2007-02-14
公開日2007-05-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The Structure of Serine Palmitoyltransferase; Gateway to Sphingolipid Biosynthesis.
J.Mol.Biol., 370, 2007
8B06
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TRYPTOPHAN SYNTHASE - Cryo-trapping by the spitrobot crystal plunger after 25 sec
分子名称: CESIUM ION, CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE, ...
著者Mehrabi, P, Sung, S, von Stetten, D, Prester, A, Hatton, C.E, Kleine-Dopke, S, Berkes, A, Gore, G, Leimkohl, J.P, Schikora, H, Kollewe, M, Rohde, H, Wilmanns, M, Tellkamp, F, Schulz, E.C.
登録日2022-09-07
公開日2023-05-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Millisecond cryo-trapping by the spitrobot crystal plunger simplifies time-resolved crystallography.
Nat Commun, 14, 2023
8B03
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TRYPTOPHAN SYNTHASE - Cryo-trapping by the spitrobot crystal plunger after 0 sec
分子名称: CESIUM ION, CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE, ...
著者Mehrabi, P, Sung, S, von Stetten, D, Prester, A, Hatton, C.E, Kleine-Dopke, S, Berkes, A, Gore, G, Leimkohl, J.P, Schikora, H, Kollewe, M, Rohde, H, Wilmanns, M, Tellkamp, F, Schulz, E.C.
登録日2022-09-07
公開日2023-05-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Millisecond cryo-trapping by the spitrobot crystal plunger simplifies time-resolved crystallography.
Nat Commun, 14, 2023

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