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PDB: 22626 件

6UPZ
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RNA polymerase II elongation complex with 5-guanidinohydantoin lesion in state 3
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Oh, J, Wang, D.
登録日2019-10-18
公開日2020-06-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献RNA polymerase II stalls on oxidative DNA damage via a torsion-latch mechanism involving lone pair-pi and CH-pi interactions.
Proc.Natl.Acad.Sci.USA, 117, 2020
1G0N
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STRUCTURE OF TRIHYDROXYNAPHTHALENE REDUCTASE IN COMPLEX WITH NADPH AND 4,5,6,7-TETRACHLORO-PHTHALIDE
分子名称: 4,5,6,7-TETRACHLORO-PHTHALIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRIHYDROXYNAPHTHALENE REDUCTASE
著者Liao, D, Basarab, G.S, Gatenby, A.A, Valent, B, Jordan, D.B.
登録日2000-10-06
公開日2001-06-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of trihydroxynaphthalene reductase-fungicide complexes: implications for structure-based design and catalysis.
Structure, 9, 2001
1OZ9
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Crystal structure of AQ_1354, a hypothetical protein from Aquifex aeolicus
分子名称: Hypothetical protein AQ_1354
著者Oganesyan, V, Busso, D, Brandsen, J, Chen, S, Jancarik, J, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2003-04-08
公開日2003-09-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.894 Å)
主引用文献Structure of the hypothetical protein AQ_1354 from Aquifex aeolicus.
Acta Crystallogr.,Sect.D, 59, 2003
6EHY
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scFv AbVance: increasing our knowledge of antibody structural space to enable faster and better decision making in drug discovery
分子名称: scFv antibody fragment
著者Hargreaves, D.
登録日2017-09-15
公開日2017-11-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献scFv AbVance: increasing our knowledge of antibody structural space to enable faster and better decision making in drug discovery
To Be Published
3ML3
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BU of 3ml3 by Molmil
Crystal structure of the IcsA autochaperone region
分子名称: Outer membrane protein icsA autotransporter
著者Diezmann, D, Kuhnel, K.
登録日2010-04-16
公開日2011-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Autochaperone Region from the Shigella flexneri Autotransporter IcsA
J.Bacteriol., 193, 2011
1PX6
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A folding mutant of human class pi glutathione transferase, created by mutating aspartate 153 of the wild-type protein to asparagine
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE, Glutathione S-transferase P
著者Kong, G.K.-W, Polekhina, G, McKinstry, W.J, Parker, M.W, Dragani, B, Aceto, A, Paludi, D, Principe, D.R, Mannervik, B, Stenberg, G.
登録日2003-07-02
公開日2003-07-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The multi-functional role of a highly conserved aspartic acid residue in glutathione transferase P1-1
To be Published
1G0V
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THE STRUCTURE OF PROTEINASE A COMPLEXED WITH A IA3 MUTANT, MVV
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEASE A INHIBITOR 3, PROTEINASE A, ...
著者Phylip, L.H, Lees, W, Brownsey, B.G, Bur, D, Dunn, B.M, Winther, J, Gustchina, A, Li, M, Copeland, T, Wlodawer, A, Kay, J.
登録日2000-10-09
公開日2001-04-21
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The potency and specificity of the interaction between the IA3 inhibitor and its target aspartic proteinase from Saccharomyces cerevisiae.
J.Biol.Chem., 276, 2001
1PXS
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BU of 1pxs by Molmil
Structure of Met56Ala mutant of Bacteriorhodopsin
分子名称: Bacteriorhodopsin, RETINAL
著者Faham, S, Yang, D, Bare, E, Yohannan, S, Whitelegge, J.P, Bowie, J.U.
登録日2003-07-06
公開日2003-12-16
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Side-chain Contributions to Membrane Protein Structure and Stability.
J.Mol.Biol., 335, 2004
6QUJ
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BU of 6quj by Molmil
GHK tagged GFP variant
分子名称: COPPER (II) ION, GLYCEROL, Green fluorescent protein, ...
著者Huyton, T, Gorlich, D.
登録日2019-02-27
公開日2020-05-27
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography.
Acta Crystallogr D Struct Biol, 76, 2020
1POJ
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Isoaspartyl Dipeptidase with bound inhibitor
分子名称: 2-{[[(1S)-1-AMINO-2-CARBOXYETHYL](DIHYDROXY)PHOSPHORANYL]METHYL}-4-METHYLPENTANOIC ACID, Isoaspartyl dipeptidase, ZINC ION
著者Jozic, D, Kaiser, J.T, Huber, R, Bode, W, Maskos, K.
登録日2003-06-15
公開日2004-06-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献X-ray structure of isoaspartyl dipeptidase from E.coli: a dinuclear zinc peptidase evolved from amidohydrolases.
J.Mol.Biol., 332, 2003
1G1H
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BU of 1g1h by Molmil
CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B COMPLEXED WITH A BIS-PHOSPHORYLATED PEPTIDE (ETD(PTR)(PTR)RKGGKGLL) FROM THE INSULIN RECEPTOR KINASE
分子名称: BI-PHOSPHORYLATED PEPTIDE FROM THE INSULIN RECEPTOR KINASE, PROTEIN TYROSINE PHOSPHATASE 1B
著者Salmeen, A, Andersen, J.N, Myers, M.P, Tonks, N.K, Barford, D.
登録日2000-10-11
公開日2001-01-17
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis for the dephosphorylation of the activation segment of the insulin receptor by protein tyrosine phosphatase 1B.
Mol.Cell, 6, 2000
6V7B
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BU of 6v7b by Molmil
Cryo-EM reconstruction of Pyrobaculum filamentous virus 2 (PFV2)
分子名称: A-DNA, Structural protein VP1, Structural protein VP2
著者Wang, F, Baquero, D.P, Su, Z, Prangishvili, D, Krupovic, M, Egelman, E.H.
登録日2019-12-08
公開日2020-04-01
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.
Virus Evol, 6, 2020
1G2N
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BU of 1g2n by Molmil
CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF THE ULTRASPIRACLE PROTEIN USP, THE ORTHOLOG OF RXRS IN INSECTS
分子名称: L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, ULTRASPIRACLE PROTEIN
著者Billas, I.M.L, Moulinier, L, Rochel, N, Moras, D, Structural Proteomics in Europe (SPINE)
登録日2000-10-20
公開日2001-04-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of the ligand-binding domain of the ultraspiracle protein USP, the ortholog of retinoid X receptors in insects.
J.Biol.Chem., 276, 2001
3MRF
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BU of 3mrf by Molmil
Crystal Structure of MHC class I HLA-A2 molecule complexed with EBV bmlf1-280-288 nonapeptide T4P variant
分子名称: 9-meric peptide from mRNA export factor EB2, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Trudel, E, Gras, S, Chouquet, A, Debeaupuis, E, Echasserieau, K, Saulquin, X, Bonneville, M, Housset, D.
登録日2010-04-29
公開日2011-05-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of MHC class I HLA-A2 molecule complexed with EBV bmlf1-280-288 nonapeptide T4P variant
To be Published
1Q1L
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Crystal Structure of Chorismate Synthase
分子名称: Chorismate synthase
著者Viola, C.M, Saridakis, V, Christendat, D, Midwest Center for Structural Genomics (MCSG)
登録日2003-07-21
公開日2003-09-30
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of chorismate synthase from Aquifex aeolicus reveals a novel beta alpha beta sandwich topology
PROTEINS: STRUCT.,FUNCT.,GENET., 54, 2004
1Q2W
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BU of 1q2w by Molmil
X-Ray Crystal Structure of the SARS Coronavirus Main Protease
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3C-like protease
著者Bonanno, J.B, Fowler, R, Gupta, S, Hendle, J, Lorimer, D, Romero, R, Sauder, J.M, Wei, C.L, Liu, E.T, Burley, S.K, Harris, T.
登録日2003-07-26
公開日2003-07-29
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Company Says It Mapped Part of SARS Virus
New York Times, 30 July, 2003
1Q3K
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BU of 1q3k by Molmil
Crystal structure of creatinine amidohydrolase (creatininase)
分子名称: GLYCEROL, ZINC ION, creatininase
著者Beuth, B, Niefind, K, Schomburg, D.
登録日2003-07-30
公開日2003-08-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of creatininase from Pseudomonas putida: A novel fold and a case of convergent evolution
J.Mol.Biol., 332, 2003
3MRM
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BU of 3mrm by Molmil
Crystal Structure of MHC class I HLA-A2 molecule complexed with HCV NS3-1406-1415 decapeptide
分子名称: 10-meric peptide from Genome polyprotein, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Gras, S, Echasserieau, K, Saulquin, X, Bonneville, M, Housset, D.
登録日2010-04-29
公開日2011-05-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of MHC class I HLA-A2 molecule complexed with HCV NS3-1406-1415 decapeptide
To be Published
6QYZ
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The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead
分子名称: the prohead RNA (71-MER) in bacteriophage phi29
著者Xu, J, Wang, D, Gui, M, Xiang, Y.
登録日2019-03-10
公開日2019-06-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6QZ7
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Structure of MBP-Mcl-1 in complex with compound 8b
分子名称: (2~{R})-2-[[6-ethyl-5-(1~{H}-indol-4-yl)thieno[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid, Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1, SODIUM ION, ...
著者Dokurno, P, Szlavik, Z, Ondi, L, Csekei, M, Paczal, A, Szabo, Z.B, Radics, G, Murray, J, Davidson, J, Chen, I, Davis, B, Hubbard, R.E, Pedder, C, Surgenor, A.E, Smith, J, Robertson, A, LeToumelin-Braizat, G, Cauquil, N, Zarka, M, Demarles, D, Perron-Sierra, F, Geneste, O, Kotschy, A.
登録日2019-03-11
公開日2019-08-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-Guided Discovery of a Selective Mcl-1 Inhibitor with Cellular Activity.
J.Med.Chem., 62, 2019
6ERE
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BU of 6ere by Molmil
Crystal structure of a computationally designed colicin endonuclease and immunity pair colEdes3/Imdes3
分子名称: Immunity, PHOSPHATE ION, colicin
著者Netzer, R, Listov, D, Dym, O, Albeck, S, Knop, O, Fleishman, S.J.
登録日2017-10-18
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Ultrahigh specificity in a network of computationally designed protein-interaction pairs.
Nat Commun, 9, 2018
6QZB
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Structure of Mcl-1 in complex with compound 8d
分子名称: (2~{R})-2-[[6-ethyl-5-(2-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid, Induced myeloid leukemia cell differentiation protein Mcl-1
著者Dokurno, P, Szlavik, Z, Ondi, L, Csekei, M, Paczal, A, Szabo, Z.B, Radics, G, Murray, J, Davidson, J, Chen, I, Davis, B, Hubbard, R.E, Pedder, C, Surgenor, A.E, Smith, J, Robertson, A, LeToumelin-Braizat, G, Cauquil, N, Zarka, M, Demarles, D, Perron-Sierra, F, Geneste, O, Kotschy, A.
登録日2019-03-11
公開日2019-08-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-Guided Discovery of a Selective Mcl-1 Inhibitor with Cellular Activity.
J.Med.Chem., 62, 2019
1Q5J
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Crystal structure of bacteriorhodopsin mutant P91A crystallized from bicelles
分子名称: Bacteriorhodopsin, RETINAL
著者Yohannan, S, Faham, S, Yang, D, Whitelegge, J.P, Bowie, J.U.
登録日2003-08-07
公開日2004-01-06
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The evolution of transmembrane helix kinks and the structural diversity of G protein-coupled receptors.
Proc.Natl.Acad.Sci.USA, 101, 2004
6ERP
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BU of 6erp by Molmil
Structure of the human mitochondrial transcription initiation complex at the LSP promoter
分子名称: DNA-directed RNA polymerase, mitochondrial, Dimethyladenosine transferase 2, ...
著者Hillen, H.S, Morozov, Y.I, Sarfallah, A, Temiakov, D, Cramer, P.
登録日2017-10-18
公開日2017-11-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (4.502 Å)
主引用文献Structural Basis of Mitochondrial Transcription Initiation.
Cell, 171, 2017
6E6E
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DGY-06-116, a novel and selective covalent inhibitor of SRC kinase
分子名称: N-(2-chloro-6-methylphenyl)-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-4-{[2-(propanoylamino)phenyl]amino}pyrimidine-5-carboxamide, Proto-oncogene tyrosine-protein kinase Src
著者Gurbani, D, Bera, A, Westover, K.
登録日2018-07-24
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure and Characterization of a Covalent Inhibitor of Src Kinase.
Front Mol Biosci, 7, 2020

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