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PDB: 22172 件

6XLV
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Crystal structure of leukemia-associated N196K mutant of U2AF65 bound to AdML splice site
分子名称: DNA/RNA (5'-R(P*UP*UP*(UD)P*UP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit
著者Maji, D, Jenkins, J.L, Kielkopf, C.L.
登録日2020-06-29
公開日2020-10-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Representative cancer-associated U2AF2 mutations alter RNA interactions and splicing.
J.Biol.Chem., 295, 2020
1E3U
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MAD structure of OXA10 class D beta-lactamase
分子名称: 1,2-ETHANEDIOL, BETA-LACTAMASE OXA-10, GOLD (I) CYANIDE ION, ...
著者Maveyraud, L, Golemi, D, Kotra, L.P, Tranier, S, Vakulenko, S, Mobashery, S, Samama, J.P.
登録日2000-06-23
公開日2001-01-12
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Insights Into Class D Beta-Lactamases are Revealed by the Crystal Structure of the Oxa10 Enzyme from Pseudomonas Aeruginosa
Structure, 8, 2000
8UK6
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Candida albicans glutaminyl tRNA synthetase (GLN4) in complex with N-pyrimidinyl-beta-thiophenylacrylamide
分子名称: (2E)-N-(pyrimidin-2-yl)-3-(thiophen-2-yl)prop-2-enamide, ZINC ION, glutamine--tRNA ligase
著者Sychantha, D, Wright, G.D.
登録日2023-10-12
公開日2024-03-06
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Allosteric inhibition of tRNA synthetase Gln4 by N-pyrimidinyl-beta-thiophenylacrylamides exerts highly selective antifungal activity.
Cell Chem Biol, 31, 2024
7NK0
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Structure of the BIR1 domain of cIAP2
分子名称: Baculoviral IAP repeat-containing protein 3, ZINC ION
著者Cossu, F, Milani, M, Mastrangelo, E, Mirdita, D.
登録日2021-02-17
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure-based identification of a new IAP-targeting compound that induces cancer cell death inducing NF-kappa B pathway.
Comput Struct Biotechnol J, 19, 2021
6Y9J
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Crystal Structure of subtype-switched Epithelial Adhesin 1 to 9 A domain (Epa1-CBL2Epa9) from Candida glabrata in complex with beta-lactose
分子名称: CALCIUM ION, CHLORIDE ION, Epa1p, ...
著者Hoffmann, D, Diderrich, R, Kock, M, Friederichs, S, Reithofer, V, Essen, L.-O, Moesch, H.-U.
登録日2020-03-09
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Functional reprogramming ofCandida glabrataepithelial adhesins: the role of conserved and variable structural motifs in ligand binding.
J.Biol.Chem., 295, 2020
6YCQ
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BU of 6ycq by Molmil
Crystal structure of the DNA binding domain of Arabidopsis thaliana Auxin Response Factor 1 (AtARF1) in complex with High Affinity DNA
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 21-7A, 21-7B, ...
著者Crespo, I, Weijers, D, Boer, D.R.
登録日2020-03-18
公開日2020-09-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis .
Proc.Natl.Acad.Sci.USA, 117, 2020
5IH2
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Structure, thermodynamics, and the role of conformational dynamics in the interactions between the N-terminal SH3 domain of CrkII and proline-rich motifs in cAbl
分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Adapter molecule crk, DI(HYDROXYETHYL)ETHER, ...
著者Bhatt, V.S, Zeng, D, Krieger, I, Sacchettini, J.C, Cho, J.-H.
登録日2016-02-28
公開日2016-06-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Binding Mechanism of the N-Terminal SH3 Domain of CrkII and Proline-Rich Motifs in cAbl.
Biophys.J., 110, 2016
5IH7
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Acetylcholinesterase of Torpedo californica in complex with the N-methyl-indoxylacetate hydrolysis products
分子名称: 1-methyl-1,2-dihydro-3H-indol-3-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pesaresi, A, Lamba, D.
登録日2016-02-29
公開日2017-04-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Acetylcholinesterase of Torpedo californica in complex with the N-methyl-indoxylacetate hydrolysis products
To Be Published
5IEY
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Crystal structure of a CDK inhibitor bound to CDK2
分子名称: 4-[(4-{[(2R,3R)-3-hydroxybutan-2-yl]amino}pyrimidin-2-yl)amino]benzene-1-sulfonamide, Cyclin-dependent kinase 2
著者Ayaz, P, Andres, D, Kwiatkowski, D.A, Kolbe, C, Lienau, P, Siemeister, G, Luecking, U, Stegmann, C.M.
登録日2016-02-25
公開日2016-04-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Conformational Adaption May Explain the Slow Dissociation Kinetics of Roniciclib (BAY 1000394), a Type I CDK Inhibitor with Kinetic Selectivity for CDK2 and CDK9.
Acs Chem.Biol., 11, 2016
8TXA
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Apo Structure of (N1G37) tRNA Methyltransferase from Mycobacterium marinum
分子名称: tRNA (guanine-N(1)-)-methyltransferase
著者Balsamo, A, Bruno, C, Edele, C, Fabian, T, Jannotta, R, Lee, R, Schryver, D, Warsaw, J, Warsaw, L, Stojanoff, V, Battaile, K, Perez, A, Bolen, R.
登録日2023-08-23
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.591 Å)
主引用文献Apo Structure of (N1G37) tRNA Methyltransferase from Mycobacterium marinum
To Be Published
5IFI
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BU of 5ifi by Molmil
CRYSTAL STRUCTURE OF ACETYL-COA SYNTHETASE IN COMPLEX WITH ADENOSINE-5'-PROPYLPHOSPHATE FROM CRYPTOCOCCUS NEOFORMANS H99
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-MONOPHOSPHATE-PROPYL ESTER, Acetyl-coenzyme A synthetase, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID), SSGCID, Fox III, D, Edwards, T.E, Lorimer, D.D, Mutz, M.W.
登録日2016-02-26
公開日2016-03-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of Acetyl-CoA Synthetase in complex with Adenosine-5'-propylphosphate from Cryptococcus neoformans H99
To Be Published
6YKI
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Crystal structure of YTHDC1 with compound DHU_DC1_092
分子名称: SULFATE ION, YTHDC1, ~{N}-ethyl-2-[(2~{S},5~{R})-5-methyl-2-phenyl-morpholin-4-yl]ethanamine
著者Bedi, R.K, Huang, D, Wiedmer, L, Caflisch, A.
登録日2020-04-06
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure-based design of ligands of the m6A-RNA reader YTHDC1
Eur J Med Chem Rep, 5, 2022
1T2X
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BU of 1t2x by Molmil
Glactose oxidase C383S mutant identified by directed evolution
分子名称: ACETATE ION, COPPER (II) ION, Galactose Oxidase, ...
著者Wilkinson, D, Akumanyi, N, Hurtado-Guerrero, R, Dawkes, H, Knowles, P.F, Phillips, S.E.V, McPherson, M.J.
登録日2004-04-23
公開日2004-05-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and kinetic studies of a series of mutants of galactose oxidase identified by directed evolution.
Protein Eng.Des.Sel., 17, 2004
6YLT
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BU of 6ylt by Molmil
Translation initiation factor 4E in complex with 3-MeBn7GpppG mRNA 5' cap analog
分子名称: Eukaryotic translation initiation factor 4E, [[(2~{R},3~{S},4~{R},5~{R})-5-[2-azanyl-7-[(3-methylphenyl)methyl]-6-oxidanylidene-1~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate
著者Kubacka, D, Wojcik, R, Baranowski, M.R, Kowalska, J, Jemielity, J.
登録日2020-04-07
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Novel N7-Arylmethyl Substituted Dinucleotide mRNA 5' cap Analogs: Synthesis and Evaluation as Modulators of Translation.
Pharmaceutics, 13, 2021
5II8
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BU of 5ii8 by Molmil
Orthorhombic crystal structure of red abalone lysin at 0.99 A resolution
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Egg-lysin, SULFATE ION
著者Sadat Al-Hosseini, H, Raj, I, Nishimura, K, De Sanctis, D, Jovine, L.
登録日2016-03-01
公開日2017-06-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Structural Basis of Egg Coat-Sperm Recognition at Fertilization.
Cell, 169, 2017
5IIZ
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Xanthomonas campestris Peroxiredoxin Q - Structure F0
分子名称: Bacterioferritin comigratory protein, SODIUM ION
著者Perkins, A, Parsonage, D, Nelson, K.J, Poole, L.B, Karplus, A.
登録日2016-03-01
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Peroxiredoxin Catalysis at Atomic Resolution.
Structure, 24, 2016
5IMC
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BU of 5imc by Molmil
Xanthomonas campestris Peroxiredoxin Q - Structure F3
分子名称: Bacterioferritin comigratory protein, FORMIC ACID, SODIUM ION
著者Perkins, A, Parsonage, D, Nelson, K.J, Poole, L.B, Karplus, A.
登録日2016-03-06
公開日2016-09-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Peroxiredoxin Catalysis at Atomic Resolution.
Structure, 24, 2016
8UTA
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BU of 8uta by Molmil
yjdF riboswitch from R. gauvreauii in complex with proflavine bound to Fab BL3-6 S97N
分子名称: Fab BL3-6 S97N heavy chain, Fab BL3-6 S97N light chain, MAGNESIUM ION, ...
著者Krochmal, D, Lewicka, A, Piccirilli, J.A.
登録日2023-10-30
公開日2024-04-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural basis for promiscuity in ligand recognition by yjdF riboswitch.
Cell Discov, 10, 2024
6Y2F
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Crystal structure (monoclinic form) of the complex resulting from the reaction between SARS-CoV-2 (2019-nCoV) main protease and tert-butyl (1-((S)-1-(((S)-4-(benzylamino)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)butan-2-yl)amino)-3-cyclopropyl-1-oxopropan-2-yl)-2-oxo-1,2-dihydropyridin-3-yl)carbamate (alpha-ketoamide 13b)
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
著者Zhang, L, Lin, D, Sun, X, Hilgenfeld, R.
登録日2020-02-15
公開日2020-03-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved alpha-ketoamide inhibitors.
Science, 368, 2020
5IO0
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BU of 5io0 by Molmil
Xanthomonas campestris Peroxiredoxin Q - Structure F9
分子名称: Bacterioferritin comigratory protein, SODIUM ION
著者Perkins, A, Parsonage, D, Nelson, K.J, Poole, L.B, Karplus, A.
登録日2016-03-08
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Peroxiredoxin Catalysis at Atomic Resolution.
Structure, 24, 2016
8UKU
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RNA polymerase II elongation complex with Fapy-dG lesion with CMP added
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Hou, P, Oh, J, Wang, D.
登録日2023-10-15
公開日2024-04-24
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Molecular Mechanism of RNA Polymerase II Transcriptional Mutagenesis by the Epimerizable DNA Lesion, Fapy·dG.
J.Am.Chem.Soc., 146, 2024
5IOW
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Xanthomonas campestris Peroxiredoxin Q - Structure FFcumene (Hyperoxidized by cumene hydroperoxide)
分子名称: Bacterioferritin comigratory protein, SODIUM ION
著者Perkins, A, Parsonage, D, Nelson, K.J, Poole, L.B, Karplus, A.
登録日2016-03-09
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Peroxiredoxin Catalysis at Atomic Resolution.
Structure, 24, 2016
8U4K
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Structure of the HER2/HER4/BTC Heterodimer Extracellular Domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Betacellulin, ...
著者Trenker, R, Diwanji, D, Bingham, T, Verba, K.A, Jura, N.
登録日2023-09-10
公開日2024-03-13
実験手法ELECTRON MICROSCOPY (4.27 Å)
主引用文献Structure of the HER2/HER4/BTC Heterodimer Extracellular Domain
To Be Published
8U4I
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Structure of the HER4/NRG1b Homodimer Extracellular Domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Isoform 6 of Pro-neuregulin-1, ...
著者Trenker, R, Diwanji, D, Bingham, T, Verba, K.A, Jura, N.
登録日2023-09-10
公開日2024-03-13
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structure of the HER2/HER4/NRG1b Heterodimer Extracellular Domain
To Be Published
5IQL
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Crystal structure of YEATS2 YEATS bound to H3K27cr peptide
分子名称: Histone H3.1, YEATS domain-containing protein 2
著者Li, H, Zhao, D, Guan, H.
登録日2016-03-11
公開日2016-07-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献YEATS2 is a selective histone crotonylation reader.
Cell Res., 26, 2016

222415

件を2024-07-10に公開中

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