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PDB: 22322 results

6DHB
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BU of 6dhb by Molmil
Crystal structure of the human TIM-3 with bound Calcium
Descriptor: 1,2-ETHANEDIOL, BENZOIC ACID, CALCIUM ION, ...
Authors:Gandhi, A.K, Kim, W.M, Huang, Y.H, Bonsor, D, Sundberg, E, Sun, Z.-Y, Petsko, G.A, Kuchroo, V, Blumberg, R.S.
Deposit date:2018-05-19
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High resolution X-ray and NMR structural study of human T-cell immunoglobulin and mucin domain containing protein-3.
Sci Rep, 8, 2018
4OA3
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BU of 4oa3 by Molmil
Crystal structure of the BA42 protein from BIZIONIA ARGENTINENSIS
Descriptor: CALCIUM ION, PROTEIN BA42
Authors:Otero, L.H, Klinke, S, Aran, M, Pellizza, L, Goldbaum, F.A, Cicero, D.
Deposit date:2014-01-03
Release date:2014-08-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Solution and crystal structure of BA42, a protein from the Antarctic bacterium Bizionia argentinensis comprised of a stand-alone TPM domain.
Proteins, 82, 2014
6DKW
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BU of 6dkw by Molmil
Crystal structure of Trk-A in complex with the Pan-Trk Kinase Inhibitor, compound 3.
Descriptor: 5-(1-methyl-1H-imidazol-4-yl)-2-[(1-{[4-(trifluoromethoxy)phenyl]acetyl}piperidin-4-yl)oxy]benzamide, Tyrosine-protein kinase receptor
Authors:Greasley, S.E, Brown, D.
Deposit date:2018-05-31
Release date:2018-07-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Discovery of Potent, Selective, and Peripherally Restricted Pan-Trk Kinase Inhibitors for the Treatment of Pain.
J. Med. Chem., 61, 2018
4OR8
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BU of 4or8 by Molmil
Crystal structure of Marburg virus VP24
Descriptor: Membrane-associated protein VP24
Authors:Zhang, A.P.P, Bornholdt, Z, Abelson, D, Saphire, E.O.
Deposit date:2014-02-11
Release date:2014-03-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.654 Å)
Cite:Crystal Structure of Marburg Virus VP24.
J.Virol., 88, 2014
6E8L
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BU of 6e8l by Molmil
Crystal Structure of Alkyl hydroperoxidase D (AhpD) from Streptococcus pneumoniae (Strain D39/ NCTC 7466)
Descriptor: Alkyl hydroperoxide reductase AhpD
Authors:Meng, Y, Davies, J, North, R, Coombes, D, Horne, C, Hampton, M, Dobson, R.
Deposit date:2018-07-30
Release date:2019-08-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-function analyses of alkylhydroperoxidase D fromStreptococcus pneumoniaereveal an unusual three-cysteine active site architecture.
J.Biol.Chem., 295, 2020
4PPK
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BU of 4ppk by Molmil
Crystal structure of eCGP123 T69V variant at pH 7.5
Descriptor: Monomeric Azami Green
Authors:Don Paul, C, Traore, D.A.K, Devenish, R.J, Close, D, Bell, T, Bradbury, A, Wilce, M.C.J, Prescott, M.
Deposit date:2014-02-27
Release date:2015-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-Ray Crystal Structure and Properties of Phanta, a Weakly Fluorescent Photochromic GFP-Like Protein.
Plos One, 10, 2015
6EII
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BU of 6eii by Molmil
The crystal structure of CK2alpha in complex with compound 18
Descriptor: (3-chloranyl-4-phenyl-phenyl)methyl-(3-phenylpropyl)azanium, ACETATE ION, Casein kinase II subunit alpha, ...
Authors:Brear, P, De Fusco, C, Iegre, J, Yoshida, M, Mitchell, S, Rossmann, M, Carro, L, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2017-09-19
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.935 Å)
Cite:Second-generation CK2 alpha inhibitors targeting the alpha D pocket.
Chem Sci, 9, 2018
4PE4
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BU of 4pe4 by Molmil
Crystal Structure of Calcium-loaded S100B bound to SC1475
Descriptor: 2,3-dimethoxy-5-[(1S)-1-phenylpropyl]benzene-1,4-diol, CALCIUM ION, Protein S100-B
Authors:Cavalier, M.C, Pierce, A.D, Wilder, P.T, Neau, D, Toth, E.A, Weber, D.J.
Deposit date:2014-04-22
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.178 Å)
Cite:Covalent Small Molecule Inhibitors of Ca(2+)-Bound S100B.
Biochemistry, 53, 2014
6ENQ
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BU of 6enq by Molmil
Structure of human PPAR gamma LBD in complex with Lanifibranor (IVA337)
Descriptor: 4-[1-(1,3-benzothiazol-6-ylsulfonyl)-5-chloro-indol-2-yl]butanoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Boubia, B, Poupardin, O, Barth, M, Amaudrut, J, Broqua, P, Tallandier, M, Zeyer, D.
Deposit date:2017-10-06
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Design, Synthesis, and Evaluation of a Novel Series of Indole Sulfonamide Peroxisome Proliferator Activated Receptor (PPAR) alpha / gamma / delta Triple Activators: Discovery of Lanifibranor, a New Antifibrotic Clinical Candidate.
J. Med. Chem., 61, 2018
4PPJ
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BU of 4ppj by Molmil
Crystal structure of Phanta, a weakly fluorescent photochromic GFP-like protein. ON state
Descriptor: Monomeric Azami Green
Authors:Don Paul, C, Traore, D.A.K, Devenish, R.J, Close, D, Bell, T, Bradbury, A, Wilce, M.C.J, Prescott, M.
Deposit date:2014-02-27
Release date:2015-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-Ray Crystal Structure and Properties of Phanta, a Weakly Fluorescent Photochromic GFP-Like Protein.
Plos One, 10, 2015
4PPL
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BU of 4ppl by Molmil
Crystal structure of eCGP123 H193Q variant at pH 7.5
Descriptor: Monomeric Azami Green
Authors:Don Paul, C, Traore, D.A.K, Devenish, R.J, Close, D, Bell, T, Bradbury, A, Wilce, M.C.J, Prescott, M.
Deposit date:2014-02-27
Release date:2015-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-Ray Crystal Structure and Properties of Phanta, a Weakly Fluorescent Photochromic GFP-Like Protein.
Plos One, 10, 2015
6EKK
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BU of 6ekk by Molmil
Crystal structure of GEF domain of DENND 1A in complex with Rab GTPase Rab35-GDP bound state.
Descriptor: 1,2-ETHANEDIOL, DENN domain-containing protein 1A, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Srikannathasan, V, Szykowska, A, Tallant, C, Strain-Damerell, C, Kopec, J, Kupinska, K, Mukhopadhyay, S, Gavin, M, Wang, D, Chalk, R, Burgess-Brown, N.A, Arrowsmith, C.H, Edwards, A, Bountra, C, von Delft, F, Huber, K.
Deposit date:2017-09-26
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of DENND1A-RAB35 complex with GDP bound state.
To be published
6EG5
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BU of 6eg5 by Molmil
The structure of SB-1-202-tubulin complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-chloropyrido[2,3-d]pyrimidin-4-yl)-7-methoxy-3,4-dihydroquinoxalin-2(1H)-one, CALCIUM ION, ...
Authors:Banerjee, A.K, Wang, Y, Chen, H, Miller, D, Li, W.
Deposit date:2018-08-18
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The structure of SB-1-202/SB-2-204-tubulin complex
To Be Published
6F3B
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BU of 6f3b by Molmil
Crystal structure of human carbonic anhydrase I in complex with the 1-(2-hydroxy-5-sulfamoylphenyl)-3-[(4-methylphenyl)methyl]urea inhibitor
Descriptor: 1-[(4-methylphenyl)methyl]-3-(2-oxidanyl-5-sulfamoyl-phenyl)urea, ACETATE ION, Carbonic anhydrase 1, ...
Authors:Ferraroni, M, Supuran, C.T, Chiapponi, D, Bozdag, M.
Deposit date:2017-11-28
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Discovery of 4-Hydroxy-3-(3-(phenylureido)benzenesulfonamides as SLC-0111 Analogues for the Treatment of Hypoxic Tumors Overexpressing Carbonic Anhydrase IX.
J. Med. Chem., 61, 2018
6FAG
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BU of 6fag by Molmil
Crystal structure of human carbonic anhydrase I in complex with the 1-(2-hydroxy-5-sulfamoylphenyl)-3-(2-methoxyphenyl)urea inhibitor
Descriptor: 1-(2-methoxyphenyl)-3-(2-oxidanyl-5-sulfamoyl-phenyl)urea, Carbonic anhydrase 1, GLYCEROL, ...
Authors:Ferraroni, M, Supuran, C.T, Bozdag, M, Chiapponi, D.
Deposit date:2017-12-15
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Discovery of 4-Hydroxy-3-(3-(phenylureido)benzenesulfonamides as SLC-0111 Analogues for the Treatment of Hypoxic Tumors Overexpressing Carbonic Anhydrase IX.
J.Med.Chem., 61, 2018
6FGM
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BU of 6fgm by Molmil
The NMR solution structure of the peptide AC12 from Hypsiboas raniceps
Descriptor: ALA-CYS-PHE-LEU-THR-ARG-LEU-GLY-THR-TYR-VAL-CYS
Authors:Popov, C.S.F.C, Simas, B.S, Goodfellow, B.J, Bocca, A.L, Andrade, P.B, Pereira, D, Valentao, P, Pereira, P.J.B, Rodrigues, J.E, Veloso Jr, P.H.H, Rezende, T.M.B.
Deposit date:2018-01-11
Release date:2019-01-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Host-defense peptides AC12, DK16 and RC11 with immunomodulatory activity isolated from Hypsiboas raniceps skin secretion.
Peptides, 113, 2019
6FAF
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BU of 6faf by Molmil
Crystal structure of human carbonic anhydrase I in complex with the 3-(2,5-dimethylphenyl)-1-(2-hydroxy-5-sulfamoylphenyl)urea inhibitor
Descriptor: 1-(2,5-dimethylphenyl)-3-(2-oxidanyl-5-sulfamoyl-phenyl)urea, Carbonic anhydrase 1, GLYCEROL, ...
Authors:Ferraroni, M, Supuran, C.T, Bozdag, M, Chiapponi, D.
Deposit date:2017-12-15
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Discovery of 4-Hydroxy-3-(3-(phenylureido)benzenesulfonamides as SLC-0111 Analogues for the Treatment of Hypoxic Tumors Overexpressing Carbonic Anhydrase IX.
J. Med. Chem., 61, 2018
6FD3
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BU of 6fd3 by Molmil
Thiophosphorylated PAK3 kinase domain
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Sorrell, F.J, Wang, D, von Delft, F, Bountra, C, Edwards, A.M, Elkins, J.M.
Deposit date:2017-12-21
Release date:2018-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Solution structures and biophysical analysis of full-length group A PAKs reveal they are monomeric and auto-inhibited incis.
Biochem.J., 476, 2019
4PE7
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BU of 4pe7 by Molmil
Crystal Structure of Calcium-loaded S100B bound to SC1982
Descriptor: (1beta,6beta,7beta,8alpha,9beta,10alpha,13alpha,14R,16beta)-1,6,7,14-tetrahydroxy-7,20-epoxykauran-15-one, CALCIUM ION, Protein S100-B
Authors:Cavalier, M.C, Pierce, A.D, Wilder, P.T, Neau, D, Toth, E.A, Weber, D.J.
Deposit date:2014-04-22
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.652 Å)
Cite:Covalent Small Molecule Inhibitors of Ca(2+)-Bound S100B.
Biochemistry, 53, 2014
6FVO
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BU of 6fvo by Molmil
Mutant DNA polymerase sliding clamp from Mycobacterium tuberculosis with bound P7 peptide
Descriptor: Beta sliding clamp, CALCIUM ION, P7 peptide
Authors:Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D.
Deposit date:2018-03-04
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.689 Å)
Cite:Peptide Interactions on Bacterial Sliding Clamps.
Acs Infect Dis., 2019
6FS3
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BU of 6fs3 by Molmil
Phosphotriesterase PTE_A53_1
Descriptor: (2~{S})-2-methylpentanedioic acid, FORMIC ACID, Parathion hydrolase, ...
Authors:Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J.
Deposit date:2018-02-19
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of Bacterail Phosphotriesterase variant with high catalytic activity towards organophosphate nerve agents developed by use of structure-based design and molecular evolution
To Be Published
4RHP
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BU of 4rhp by Molmil
Crystal structure of human COQ9 in complex with a phospholipid, Northeast Structural Genomics Consortium Target HR5043
Descriptor: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, Ubiquinone biosynthesis protein COQ9, mitochondrial
Authors:Forouhar, F, Lew, S, Seetharaman, J, Wang, H, Lee, D, Kogan, S, Maglaqui, M, Xiao, R, Everett, J.K, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG), Mitochondrial Protein Partnership (MPP)
Deposit date:2014-10-02
Release date:2014-10-22
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Mitochondrial COQ9 is a lipid-binding protein that associates with COQ7 to enable coenzyme Q biosynthesis.
Proc.Natl.Acad.Sci.USA, 111, 2014
6FVM
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BU of 6fvm by Molmil
Mutant DNA polymerase sliding clamp from Escherichia coli with bound P7 peptide
Descriptor: Beta sliding clamp, CALCIUM ION, GLYCEROL, ...
Authors:Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D.
Deposit date:2018-03-04
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Peptide Interactions on Bacterial Sliding Clamps.
Acs Infect Dis., 2019
6FWS
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BU of 6fws by Molmil
Structure of DinG in complex with ssDNA and ADPBeF
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DinG, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Cheng, K, Wigley, D.
Deposit date:2018-03-07
Release date:2018-12-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA translocation mechanism of an XPD family helicase.
Elife, 7, 2018
4RE0
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BU of 4re0 by Molmil
Crystal structure of VmoLac in P622 space group
Descriptor: COBALT (II) ION, GLYCEROL, MYRISTIC ACID, ...
Authors:Hiblot, J, Bzdrenga, J, Champion, C, Gotthard, G, Gonzalez, D, Chabriere, E, Elias, M.
Deposit date:2014-09-20
Release date:2015-02-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of VmoLac, a tentative quorum quenching lactonase from the extremophilic crenarchaeon Vulcanisaeta moutnovskia.
Sci Rep, 5, 2015

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