Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 56424 results

5GAD
DownloadVisualize
BU of 5gad by Molmil
RNC-SRP-SR complex early state
Descriptor: 1A9L SS, 23S rRNA, 50S ribosomal protein L10, ...
Authors:Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N.
Deposit date:2015-11-24
Release date:2016-01-27
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
Nat Commun, 7, 2016
2MD0
DownloadVisualize
BU of 2md0 by Molmil
Solution structure of ShK-like immunomodulatory peptide from Ancylostoma caninum (hookworm)
Descriptor: AcK1
Authors:Chhabra, S, Swarbrick, J.D, Mohanty, B, Chang, S.C, Chandy, G.K, Pennington, M.W, Norton, R.S.
Deposit date:2013-08-28
Release date:2014-07-02
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Kv1.3 channel-blocking immunomodulatory peptides from parasitic worms: implications for autoimmune diseases.
Faseb J., 28, 2014
4PT5
DownloadVisualize
BU of 4pt5 by Molmil
Crystal structure of PLpro from Middle East Respiratory Syndrome (MERS) coronavirus
Descriptor: Papain-like protease, ZINC ION
Authors:Lei, H, Santarsiero, B.D, Lee, H, Johnson, M.E.
Deposit date:2014-03-10
Release date:2014-05-21
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of PLpro from Middle East Respiratory Syndrome (MERS) coronavirus
To be Published
2M8P
DownloadVisualize
BU of 2m8p by Molmil
The structure of the W184AM185A mutant of the HIV-1 capsid protein
Descriptor: Capsid protein p24
Authors:Deshmukh, L, Schwieters, C.D, Grishaev, A, Clore, G, Ghirlando, R.
Deposit date:2013-05-24
Release date:2013-11-20
Last modified:2024-10-16
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Structure and Dynamics of Full-Length HIV-1 Capsid Protein in Solution.
J.Am.Chem.Soc., 135, 2013
2M02
DownloadVisualize
BU of 2m02 by Molmil
3D structure of cap-gly domain of mammalian dynactin determined by magic angle spinning NMR spectroscopy
Descriptor: Dynactin subunit 1
Authors:Yan, S, Hou, G, Schwieters, C.D, Ahmed, S, Williams, J.C, Polenova, T.
Deposit date:2012-10-15
Release date:2013-05-08
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Three-Dimensional Structure of CAP-Gly Domain of Mammalian Dynactin Determined by Magic Angle Spinning NMR Spectroscopy: Conformational Plasticity and Interactions with End-Binding Protein EB1.
J.Mol.Biol., 425, 2013
7JGW
DownloadVisualize
BU of 7jgw by Molmil
Crystal structure of BCL-XL in complex with COMPOUND 1620116, CRYSTAL FORM 1
Descriptor: 6-[(8E)-8-{2-[4-(benzylcarbamoyl)-1,3-thiazol-2-yl]hydrazinylidene}-5,6,7,8-tetrahydronaphthalen-2-yl]-3-(2-phenylethoxy)pyridine-2-carboxylic acid, Bcl-2-like protein 1
Authors:Lee, M, Fairlie, W.D, Smith, B.J, Lee, E.F.
Deposit date:2020-07-19
Release date:2021-02-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Optimization of Benzothiazole and Thiazole Hydrazones as Inhibitors of Schistosome BCL-2.
Acs Infect Dis., 7, 2021
6EIT
DownloadVisualize
BU of 6eit by Molmil
Coxsackievirus A24v in complex with the D1-D2 fragment of ICAM-1
Descriptor: Intercellular adhesion molecule 1, VP1, VP2, ...
Authors:Hurdiss, D.L, Ranson, N.A.
Deposit date:2017-09-19
Release date:2018-01-10
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Role of enhanced receptor engagement in the evolution of a pandemic acute hemorrhagic conjunctivitis virus.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1BRZ
DownloadVisualize
BU of 1brz by Molmil
SOLUTION STRUCTURE OF THE SWEET PROTEIN BRAZZEIN, NMR, 43 STRUCTURES
Descriptor: BRAZZEIN
Authors:Caldwell, J.E, Abildgaard, F, Dzakula, Z, Ming, D, Hellekant, G, Markley, J.L.
Deposit date:1998-03-12
Release date:1998-07-01
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Solution structure of the thermostable sweet-tasting protein brazzein.
Nat.Struct.Biol., 5, 1998
2M94
DownloadVisualize
BU of 2m94 by Molmil
NMR structure of the lymphocyte receptor NKR-P1A
Descriptor: Killer cell lectin-like receptor subfamily B member 1A
Authors:Chmelik, J, Rozbesky, D, Pospisilova, E, Novak, P.
Deposit date:2013-05-31
Release date:2014-06-11
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:NMR structure of the lymphocyte receptor NKR-P1A reveals a different conformation of the conserved loop compared to crystal structure
To be Published
2MAF
DownloadVisualize
BU of 2maf by Molmil
Solution structure of opa60 from n. gonorrhoeae
Descriptor: Opacity protein opA60
Authors:Columbus, L, Fox, D.A, Larsson, P, Lo, R.H, Kroncke, B.M, Kasson, P.M.
Deposit date:2013-07-08
Release date:2014-11-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the Neisserial outer membrane protein Opa60: loop flexibility essential to receptor recognition and bacterial engulfment.
J.Am.Chem.Soc., 136, 2014
2MC1
DownloadVisualize
BU of 2mc1 by Molmil
Solution structure of the Vav1 SH2 domain complexed with a Syk-derived singly phosphorylated peptide
Descriptor: Proto-oncogene vav, Tyrosine-protein kinase SYK
Authors:Chen, C, Piraner, D, Gorenstein, N.M, Geahlen, R.L, Post, C.B.
Deposit date:2013-08-13
Release date:2013-08-28
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Differential recognition of syk-binding sites by each of the two phosphotyrosine-binding pockets of the Vav SH2 domain.
Biopolymers, 99, 2013
2M4N
DownloadVisualize
BU of 2m4n by Molmil
Solution structure of the putative Ras interaction domain of AFD-1, isoform a from Caenorhabditis elegans
Descriptor: Protein AFD-1, isoform a
Authors:Harris, R, Hillerich, B, Ahmed, M, Bonanno, J.B, Chamala, S, Evans, B, Lafleur, J, Hammonds, J, Washington, E, Stead, M, Love, J, Attonito, J, Seidel, R.D, Liddington, R.C, Weis, W.I, Nelson, W.J, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Assembly, Dynamics and Evolution of Cell-Cell and Cell-Matrix Adhesions (CELLMAT)
Deposit date:2013-02-07
Release date:2013-03-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the putative Ras interaction domain of AFD-1, isoform a from Caenorhabditis elegans
To be Published
7L33
DownloadVisualize
BU of 7l33 by Molmil
X-ray Structure of a Cu-Bound De Novo Designed Peptide Trimer
Descriptor: COPPER (II) ION, Cu-3SCC
Authors:Chakraborty, S, Wawrzak, Z, Prasad, P, Mitra, S, Prakash, D.
Deposit date:2020-12-17
Release date:2021-08-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:De Novo Design of a Self-Assembled Artificial Copper Peptide that Activates and Reduces Peroxide
Acs Catalysis, 11, 2021
2MIF
DownloadVisualize
BU of 2mif by Molmil
Solution structure of the CLAVATA-like encoded peptide of Meloidogyne hapla - MhCLE4
Descriptor: CLAVATA-like encoded peptide of Meloidogyne hapla - MhCLE4
Authors:Bobay, B.G, DiGennaro, P.M, Bird, D.M.
Deposit date:2013-12-13
Release date:2014-12-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Inferring function of CLE peptides from high resolution tertiary structures
To be Published
3J32
DownloadVisualize
BU of 3j32 by Molmil
An asymmetric unit map from electron cryo-microscopy of Haliotis diversicolor molluscan hemocyanin isoform 1 (HdH1)
Descriptor: Hemocyanin isoform 1
Authors:Zhang, Q, Dai, X, Cong, Y, Zhang, J, Chen, D.-H, Dougherty, M, Wang, J, Ludtke, S, Schmid, M.F, Chiu, W.
Deposit date:2013-02-20
Release date:2013-04-17
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-EM structure of a molluscan hemocyanin suggests its allosteric mechanism.
Structure, 21, 2013
2LZ1
DownloadVisualize
BU of 2lz1 by Molmil
Solution NMR Structure of the DNA-Binding Domain of Human NF-E2-Related Factor 2, Northeast Structural Genomics Consortium (NESG) Target HR3520O
Descriptor: Nuclear factor erythroid 2-related factor 2
Authors:Eletsky, A, Pulavarti, S.V.S.R.K, Lee, D, Kohan, E, Janjua, H, Xiao, R, Acton, T.B, Everett, J.K, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-09-22
Release date:2012-11-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of the DNA-Binding Domain of Human NF-E2-Related Factor 2, Northeast Structural Genomics Consortium (NESG) Target HR3520O
To be Published
4PTI
DownloadVisualize
BU of 4pti by Molmil
THE GEOMETRY OF THE REACTIVE SITE AND OF THE PEPTIDE GROUPS IN TRYPSIN, TRYPSINOGEN AND ITS COMPLEXES WITH INHIBITORS
Descriptor: TRYPSIN INHIBITOR
Authors:Huber, R, Kukla, D, Ruehlmann, A, Epp, O, Formanek, H, Deisenhofer, J, Steigemann, W.
Deposit date:1982-09-27
Release date:1983-01-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Geometry of the Reactive Site and of the Peptide Groups in Trypsin, Trypsinogen and its Complexes with Inhibitors
Acta Crystallogr.,Sect.B, 39, 1983
7L7J
DownloadVisualize
BU of 7l7j by Molmil
Cryo-EM structure of Hsp90:p23 closed-state complex
Descriptor: Heat shock protein HSP 90-alpha, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Prostaglandin E synthase 3
Authors:Lee, K, Thwin, A.C, Tse, E, Gates, S.N, Southworth, D.R.
Deposit date:2020-12-28
Release date:2021-08-25
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structure of an Hsp90-immunophilin complex reveals cochaperone recognition of the client maturation state.
Mol.Cell, 81, 2021
2M47
DownloadVisualize
BU of 2m47 by Molmil
Solution NMR structure of the Polyketide_cyc-like protein Cgl2372 from Corynebacterium glutamicum, Northeast Structural Genomics Consortium Target CgR160
Descriptor: Uncharacterized protein Cgl2373
Authors:Yang, Y, Ramelot, T.A, Lee, D, Ciccosanti, C, Sapin, A, Janjua, H, Nair, R, Rost, B, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-01-30
Release date:2013-02-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of the Polyketide_cyc-like protein Cgl2372 from Corynebacterium glutamicum, Northeast Structural Genomics Consortium Target CgR160.
To be Published
7NAX
DownloadVisualize
BU of 7nax by Molmil
Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Lopez-Alonso, J, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2021-01-25
Release date:2021-12-08
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
2M79
DownloadVisualize
BU of 2m79 by Molmil
[Asp2,11]RTD-1
Descriptor: [Asp2,11]RTD-1
Authors:Conibear, A.C, Bochen, A, Rosengren, K, Kessler, H, Craik, D.J.
Deposit date:2013-04-19
Release date:2014-02-05
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:The Cyclic Cystine Ladder of Theta-Defensins as a Stable, Bifunctional Scaffold: A Proof-of-Concept Study Using the Integrin-Binding RGD Motif
Chembiochem, 15, 2014
2M8N
DownloadVisualize
BU of 2m8n by Molmil
HIV-1 capsid monomer structure
Descriptor: Capsid protein p24
Authors:Deshmukh, L, Schwieters, C.D, Grishaev, A, Clore, G, Ghirlando, R.
Deposit date:2013-05-24
Release date:2013-11-20
Last modified:2024-11-27
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Structure and Dynamics of Full-Length HIV-1 Capsid Protein in Solution.
J.Am.Chem.Soc., 135, 2013
2LZH
DownloadVisualize
BU of 2lzh by Molmil
THE STRUCTURES OF THE MONOCLINIC AND ORTHORHOMBIC FORMS OF HEN EGG-WHITE LYSOZYME AT 6 ANGSTROMS RESOLUTION.
Descriptor: HEN EGG WHITE LYSOZYME
Authors:Artymiuk, P.J, Blake, C.C.F, Rice, D.W, Wilson, K.S.
Deposit date:1981-06-29
Release date:1981-09-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (6 Å)
Cite:The Structures of the Monoclinic and Orthorhombic Forms of Hen Egg-White Lysozyme at 6 Angstroms Resolution.
Acta Crystallogr.,Sect.B, 38, 1982
7NAR
DownloadVisualize
BU of 7nar by Molmil
Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2021-01-25
Release date:2021-12-08
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
5GAG
DownloadVisualize
BU of 5gag by Molmil
RNC in complex with SRP-SR in the closed state
Descriptor: 1A9L SS, 23S rRNA, 50S ribosomal protein L10, ...
Authors:Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N.
Deposit date:2015-11-26
Release date:2016-01-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
Nat Commun, 7, 2016

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon