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PDB: 56424 results

8KDB
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BU of 8kdb by Molmil
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in dimeric form
Descriptor: MAGNESIUM ION, Phosphoprotein, RNA-directed RNA polymerase L, ...
Authors:Xie, J, Wang, L, Zhai, G, Wu, D, Lin, Z, Wang, M, Yan, X, Gao, L, Huang, X, Fearns, R, Chen, S.
Deposit date:2023-08-09
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for dimerization of a paramyxovirus polymerase complex.
Nat Commun, 15, 2024
2F2J
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BU of 2f2j by Molmil
Solution structure of [W19K, P20N, V21K]-kalata B1
Descriptor: Kalata-B1
Authors:Clark, R.J, Daly, N.L, Craik, D.J.
Deposit date:2005-11-17
Release date:2006-01-31
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Structural plasticity of the cyclic cystine knot framework: implications for biological activity and drug design
Biochem.J., 394, 2006
7JR9
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BU of 7jr9 by Molmil
Chlamydomonas reinhardtii radial spoke minimal head complex
Descriptor: Flagellar radial spoke protein 10, Flagellar radial spoke protein 4, Flagellar radial spoke protein 6, ...
Authors:Grossman-Haham, I, Coudray, N, Yu, Z, Wang, F, Bhabha, G, Vale, R.D.
Deposit date:2020-08-11
Release date:2020-12-16
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structure of the radial spoke head and insights into its role in mechanoregulation of ciliary beating.
Nat.Struct.Mol.Biol., 28, 2021
9E2M
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BU of 9e2m by Molmil
Variediene synthase with one cyclase (conformation 3)
Descriptor: PYROPHOSPHATE 2-, Variediene synthase
Authors:Wenger, E.S, Christianson, D.W.
Deposit date:2024-10-22
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Variediene synthase hexameric prenyltransferase core
To Be Published
9E2L
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BU of 9e2l by Molmil
Variediene synthase with one cyclase (conformation 2)
Descriptor: PYROPHOSPHATE 2-, Variediene synthase
Authors:Wenger, E.S, Christianson, D.W.
Deposit date:2024-10-22
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Variediene synthase with one cyclase (conformation 2)
To Be Published
9DTD
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BU of 9dtd by Molmil
Crystal Structure of C2-01018
Descriptor: C2-01018
Authors:Bera, A.K, Schlichthaerle, T, Kang, A, Baker, D.
Deposit date:2024-09-30
Release date:2025-04-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:De novo design of TrkA specific agonists
To Be Published
8TTE
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BU of 8tte by Molmil
Protonated state of NorA at pH 5.0
Descriptor: FabDA1 CDRH3 loop, Quinolone resistance protein NorA
Authors:Li, J.P, Li, Y, Koide, A, Kuang, H.H, Torres, V.J, Koide, S, Wang, D.N, Traaseth, N.J.
Deposit date:2023-08-13
Release date:2024-05-29
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Proton-coupled transport mechanism of the efflux pump NorA.
Nat Commun, 15, 2024
6ZY0
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BU of 6zy0 by Molmil
Catabolic reductive dehalogenase NpRdhA, N-terminally tagged, K488Q variant
Descriptor: CHLORIDE ION, COBALAMIN, IRON/SULFUR CLUSTER, ...
Authors:Leys, D, Halliwell, T.
Deposit date:2020-07-30
Release date:2020-09-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Catabolic Reductive Dehalogenase Substrate Complex Structures Underpin Rational Repurposing of Substrate Scope.
Microorganisms, 8, 2020
9EJY
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BU of 9ejy by Molmil
Human hnRNPR extended eRRM1 domain
Descriptor: Heterogeneous nuclear ribonucleoprotein R
Authors:Eichhorn, C.D, Atsrim, E.S.
Deposit date:2024-11-29
Release date:2025-04-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An evolutionarily conserved tryptophan cage promotes folding of the extended RNA recognition motif in the hnRNPR-like protein family.
Protein Sci., 34, 2025
2J8J
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BU of 2j8j by Molmil
Solution Structure of the A4 Domain of Blood Coagulation Factor XI
Descriptor: COAGULATION FACTOR XI
Authors:Samuel, D, Cheng, H, Riley, P.W, Canutescu, A.A, Bu, Z, Walsh, P.N, Roder, H.
Deposit date:2006-10-25
Release date:2007-10-02
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Solution Structure of the A4 Domain of Factor Xi Sheds Light on the Mechanism of Zymogen Activation.
Proc.Natl.Acad.Sci.USA, 104, 2007
5FWK
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BU of 5fwk by Molmil
Atomic cryoEM structure of Hsp90-Cdc37-Cdk4 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CYCLIN-DEPENDENT KINASE 4, HEAT SHOCK PROTEIN HSP 90 BETA, ...
Authors:Verba, K.A, Wang, R.Y.R, Arakawa, A, Liu, Y, Yokoyama, S, Agard, D.A.
Deposit date:2016-02-17
Release date:2016-07-06
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Atomic Structure of Hsp90-Cdc37-Cdk4 Reveals that Hsp90 Traps and Stabilizes an Unfolded Kinase.
Science, 352, 2016
8TTG
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BU of 8ttg by Molmil
NorA single mutant - E222Q at pH 7.5
Descriptor: FabDA1 CDRH3 loop, Quinolone resistance protein NorA
Authors:Li, J.P, Li, Y, Koide, A, Kuang, H.H, Torres, V.J, Koide, S, Wang, D.N, Traaseth, N.J.
Deposit date:2023-08-13
Release date:2024-05-29
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Proton-coupled transport mechanism of the efflux pump NorA.
Nat Commun, 15, 2024
8QZF
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BU of 8qzf by Molmil
Heme-domain BM3 mutant T268E
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bifunctional cytochrome P450/NADPH--P450 reductase, DI(HYDROXYETHYL)ETHER, ...
Authors:Opperman, D.J, Ebrecht, A.C, Aschenbrenner, J.C.
Deposit date:2023-10-27
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Revisiting strategies and their combinatorial effect for introducing peroxygenase activity in CYP102A1 (P450BM3)
Mol Catal, 557, 2024
8QZZ
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BU of 8qzz by Molmil
Crystal structure of human eIF2 alpha-gamma complexed with PPP1R15A_420-452
Descriptor: Eukaryotic translation initiation factor 2 subunit 1, Eukaryotic translation initiation factor 2 subunit 3, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Yan, Y, Ron, D.
Deposit date:2023-10-30
Release date:2024-03-20
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Substrate recruitment via eIF2 gamma enhances catalytic efficiency of a holophosphatase that terminates the integrated stress response.
Proc.Natl.Acad.Sci.USA, 121, 2024
7DZW
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BU of 7dzw by Molmil
Apo spike protein from SARS-CoV2
Descriptor: Spike glycoprotein
Authors:Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
Deposit date:2021-01-26
Release date:2021-06-02
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
8KDC
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BU of 8kdc by Molmil
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in monomeric form
Descriptor: MAGNESIUM ION, Phosphoprotein, RNA-directed RNA polymerase L, ...
Authors:Xie, J, Wang, L, Zhai, G, Wu, D, Lin, Z, Wang, M, Yan, X, Gao, L, Huang, X, Fearns, R, Chen, S.
Deposit date:2023-08-09
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for dimerization of a paramyxovirus polymerase complex.
Nat Commun, 15, 2024
5FET
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BU of 5fet by Molmil
Crystal Structure of PVX_084705 in presence of Compound 2
Descriptor: 4-[7-[(dimethylamino)methyl]-2-(4-fluorophenyl)imidazo[1,2-a]pyridin-3-yl]pyrimidin-2-amine, cGMP-dependent protein kinase, putative
Authors:Wernimont, A.K, Tempel, W, Walker, J.R, He, H, Seitova, A, Hills, T, Neculai, A.M, Baker, D.A, Flueck, C, Kettleborough, C.A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Hutchinson, A, El Bakkouri, M, Structural Genomics Consortium (SGC)
Deposit date:2015-12-17
Release date:2016-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Crystal Structure of PVX_084705 in presence of Compound 2
To be published
7MKY
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BU of 7mky by Molmil
SARS-CoV-2 frameshifting pseudoknot RNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, COBALT HEXAMMINE(III), MAGNESIUM ION, ...
Authors:Jones, C.P, Ferre-D'Amare, A.R.
Deposit date:2021-04-27
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Crystal structure of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) frameshifting pseudoknot.
Rna, 28, 2022
6ZT1
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BU of 6zt1 by Molmil
Two states of a de novo hexameric coiled coil assembly CC-Type2-(LaIdGe)4
Descriptor: CC-Type2-(LaIdGe)4
Authors:Rhys, G.G, Brady, R.L, Woolfson, D.N.
Deposit date:2020-07-17
Release date:2021-02-03
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural resolution of switchable states of a de novo peptide assembly.
Nat Commun, 12, 2021
7JRJ
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BU of 7jrj by Molmil
Chlamydomonas reinhardtii radial spoke head and neck (recombinant)
Descriptor: Flagellar radial spoke protein 1, Flagellar radial spoke protein 10, Flagellar radial spoke protein 2, ...
Authors:Grossman-Haham, I, Coudray, N, Yu, Z, Wang, F, Zhang, N, Bhabha, G, Vale, R.D.
Deposit date:2020-08-12
Release date:2020-12-16
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structure of the radial spoke head and insights into its role in mechanoregulation of ciliary beating.
Nat.Struct.Mol.Biol., 28, 2021
3I5M
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BU of 3i5m by Molmil
Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera
Descriptor: Putative leucoanthocyanidin reductase 1
Authors:Mauge, C, Gargouri, M, d'Estaintot, B.L, Granier, T, Gallois, B.
Deposit date:2009-07-06
Release date:2010-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Crystal structure and catalytic mechanism of leucoanthocyanidin reductase from Vitis vinifera.
J.Mol.Biol., 397, 2010
6DH9
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BU of 6dh9 by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with MSDC-0602
Descriptor: (5S)-5-({4-[2-(3-methoxyphenyl)-2-oxoethoxy]phenyl}methyl)-1,3-thiazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma, nonanoic acid
Authors:Shang, J, Kojetin, D.J.
Deposit date:2018-05-18
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with MSDC-0602
To Be Published
8T3N
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BU of 8t3n by Molmil
Solution NMR structure of synthetic peptide AMPCry10Aa_5 rational designed from Cry10Aa bacterial protein
Descriptor: Pesticidal crystal protein Cry10Aa peptide
Authors:Barra, J.B, Freitas, C.D.P, Rios, T.B, Maximiano, M.R, Fernandes, F.C, Amorim, G.C, Porto, W.F, Grossi-de-Sa, M.F, Franco, O.F, Liao, L.M.
Deposit date:2023-06-07
Release date:2024-06-12
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Anti-Staphy Peptides Rationally Designed from Cry10Aa Bacterial Protein.
Acs Omega, 9, 2024
9E2K
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BU of 9e2k by Molmil
Variediene synthase with one cyclase (conformation 1)
Descriptor: PYROPHOSPHATE 2-, Variediene synthase
Authors:Wenger, E.S, Christianson, D.W.
Deposit date:2024-10-22
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Variediene synthase hexameric prenyltransferase core
To Be Published
8EQ1
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BU of 8eq1 by Molmil
Escherichia coli pyruvate kinase D127N
Descriptor: Pyruvate kinase, SULFATE ION
Authors:Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
Deposit date:2022-10-07
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published

238582

数据于2025-07-09公开中

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