Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 53012 件

8TP1
DownloadVisualize
BU of 8tp1 by Molmil
ATP-2 state of Bcs1 (C7 symmetrized)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mitochondrial chaperone BCS1
著者Zhan, J, Xia, D.
登録日2023-08-04
公開日2024-06-05
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Conformations of Bcs1L undergoing ATP hydrolysis suggest a concerted translocation mechanism for folded iron-sulfur protein substrate.
Nat Commun, 15, 2024
6WXW
DownloadVisualize
BU of 6wxw by Molmil
crystal structure of apo Card1
分子名称: Card1
著者Rostol, J, Xie, W, Patel, D.J, Marraffini, L.
登録日2020-05-12
公開日2020-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献The Card1 nuclease provides defence during type III CRISPR immunity.
Nature, 590, 2021
5KCU
DownloadVisualize
BU of 5kcu by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with an N-ethyl, alpha-naphthyl OBHS-N derivative
分子名称: (1S,2R,4S)-N-ethyl-5,6-bis(4-hydroxyphenyl)-N-(naphthalen-2-yl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide, Estrogen receptor, NCOA2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Dharmarajan, V, Goswami, D, Kastrati, I, Novick, S, Nowak, J, Zhou, H.B, Boonmuen, N, Zhao, Y, Min, J, Frasor, J, Katzenellenbogen, B.S, Griffin, P.R, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-06-07
公開日2016-11-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Full antagonism of the estrogen receptor without a prototypical ligand side chain.
Nat. Chem. Biol., 13, 2017
8OFB
DownloadVisualize
BU of 8ofb by Molmil
Crystal Structure of T. maritima reverse gyrase with a minimal latch, hexagonal form
分子名称: CHLORIDE ION, HEXAETHYLENE GLYCOL, Reverse gyrase, ...
著者Klostermeier, D, Rasche, R, Mhaindarkar, V, Kummel, D, Rudolph, M.G.
登録日2023-03-15
公開日2023-04-26
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structure of reverse gyrase with a minimal latch that supports ATP-dependent positive supercoiling without specific interactions with the topoisomerase domain.
Acta Crystallogr D Struct Biol, 79, 2023
6W7W
DownloadVisualize
BU of 6w7w by Molmil
30S-Inactive-low-Mg2+ Class B
分子名称: 16S rRNA, 30S ribosomal protein S12, 30S ribosomal protein S15, ...
著者Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J.
登録日2020-03-19
公開日2020-10-21
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy.
Rna, 26, 2020
7KR8
DownloadVisualize
BU of 7kr8 by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H56A mutant with pyruvate bound in the active site
分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
著者Saran, S, Sanders, D.A.R.
登録日2020-11-19
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献ALLOSTERIC SITE RESIDUE 'H56' CAPS THE INHIBITOR AT THE TIGHT DIMER INTERFACE FOR TRANSMITTING THE ALLOSTERIC INHIBITION SIGNALS IN Cj.DHDPS
To Be Published
6VK6
DownloadVisualize
BU of 6vk6 by Molmil
Crystal Structure of Methylosinus trichosporium OB3b Soluble Methane Monooxygenase Hydroxylase
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ...
著者Jones, J.C, Banerjee, R, Shi, K, Aihara, H, Lipscomb, J.D.
登録日2020-01-18
公開日2020-08-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structural Studies of theMethylosinus trichosporiumOB3b Soluble Methane Monooxygenase Hydroxylase and Regulatory Component Complex Reveal a Transient Substrate Tunnel.
Biochemistry, 59, 2020
3HRH
DownloadVisualize
BU of 3hrh by Molmil
Crystal Structure of Antigen 85C and Glycerol
分子名称: Antigen 85-C, GLYCEROL
著者Boucau, J, Sanki, A.K, Umesiri, F.E, Sucheck, S.J, Ronning, D.R.
登録日2009-06-09
公開日2009-09-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Design, synthesis and biological evaluation of sugar-derived esters, alpha-ketoesters and alpha-ketoamides as inhibitors for Mycobacterium tuberculosis antigen 85C.
Mol Biosyst, 5, 2009
7TQ8
DownloadVisualize
BU of 7tq8 by Molmil
Structure of MERS 3CL protease in complex with the cyclopropane based inhibitor 14d
分子名称: (1R,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1R,2S)-2-propylcyclopropyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid, (1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1R,2S)-2-propylcyclopropyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid, Orf1a protein, ...
著者Liu, L, Lovell, S, Battaile, K.P, Nguyen, H.N, Chamandi, S.D, Picard, H.R, Madden, T.K, Thruman, H.A, Kim, Y, Groutas, W.C, Chang, K.O.
登録日2022-01-26
公開日2022-03-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Broad-Spectrum Cyclopropane-Based Inhibitors of Coronavirus 3C-like Proteases: Biochemical, Structural, and Virological Studies.
Acs Pharmacol Transl Sci, 6, 2023
5IM3
DownloadVisualize
BU of 5im3 by Molmil
Crystal structure of the class I ribonucleotide reductase from Pseudomonas aeruginosa in complex with dATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, Ribonucleoside-diphosphate reductase
著者Johansson, R, Logan, D.T.
登録日2016-03-05
公開日2016-05-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献Structural Mechanism of Allosteric Activity Regulation in a Ribonucleotide Reductase with Double ATP Cones.
Structure, 24, 2016
7KUZ
DownloadVisualize
BU of 7kuz by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H56N mutant with pyruvate bound in the active site and L-lysine bound at the allosteric site
分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
著者Saran, S, Sanders, D.A.R.
登録日2020-11-25
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献ALLOSTERIC SITE RESIDUE 'H56' CAPS THE INHIBITOR AT THE TIGHT DIMER INTERFACE FOR TRANSMITTING THE ALLOSTERIC INHIBITION SIGNALS IN Cj.DHDPS
To Be Published
8FTH
DownloadVisualize
BU of 8fth by Molmil
Chaetomium thermophilum SETX - NPPC internal deletion
分子名称: 5'-3' RNA helicase-like protein, ADENOSINE-5'-DIPHOSPHATE
著者Williams, R.S, Appel, C.D.
登録日2023-01-12
公開日2023-10-25
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Sen1 architecture: RNA-DNA hybrid resolution, autoregulation, and insights into SETX inactivation in AOA2.
Mol.Cell, 83, 2023
7U1H
DownloadVisualize
BU of 7u1h by Molmil
Crystal structure of Lens culinaris vicilin
分子名称: Allergen Len c 1.0101
著者Robinson, K.A, Bakestani, I.D, Loewen, M.C.
登録日2022-02-21
公開日2022-03-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Pea and lentil 7S globulin crystal structures with comparative immunoglobulin epitope mapping.
Food Chem (Oxf), 5, 2022
6XS4
DownloadVisualize
BU of 6xs4 by Molmil
Crystal structure of glycyl radical enzyme ECL_02896 from Enterobacter cloacae subsp. cloacae
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Formate C-acetyltransferase
著者Valleau, D, Evdokimova, E, Stogios, P.J, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-07-14
公開日2020-08-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal structure of glycyl radical enzyme ECL_02896 from Enterobacter cloacae subsp. cloacae.
To Be Published
8FTK
DownloadVisualize
BU of 8ftk by Molmil
Chaetomium thermophilum SETX (Full-length)
分子名称: 5'-3' RNA helicase-like protein
著者Williams, R.S, Appel, C.D.
登録日2023-01-12
公開日2023-10-25
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (4.56 Å)
主引用文献Sen1 architecture: RNA-DNA hybrid resolution, autoregulation, and insights into SETX inactivation in AOA2.
Mol.Cell, 83, 2023
7L8O
DownloadVisualize
BU of 7l8o by Molmil
OXA-48 bound by Compound 4.3
分子名称: 1,2-ETHANEDIOL, 9H-fluorene-2,7-disulfonate, Beta-lactamase, ...
著者Taylor, D.M, Hu, L, Prasad, B.V.V, Palzkill, T.
登録日2020-12-31
公開日2021-12-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48.
Acs Infect Dis., 7, 2021
8A1G
DownloadVisualize
BU of 8a1g by Molmil
Structure of the SNX1-SNX5 complex
分子名称: N-PROPANOL, Sorting nexin-1, Sorting nexin-5
著者Lopez-Robles, C, Scaramuzza, S, Astorga-Simon, E.N, Banos-Mateos, S, Vidaurrazaga, A, Rojas, A.L, Castano, D, Hierro, A.
登録日2022-06-01
公開日2023-06-14
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Architecture of the ESCPE-1 membrane coat.
Nat.Struct.Mol.Biol., 30, 2023
7ZYB
DownloadVisualize
BU of 7zyb by Molmil
BeKdgF with Ca
分子名称: CALCIUM ION, Cupin, GLYCEROL
著者Fredslund, F, Teze, D, Welner, D.H.
登録日2022-05-24
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献BeKdgF with Ca
To Be Published
7ZYC
DownloadVisualize
BU of 7zyc by Molmil
BeKdgF with Zn
分子名称: Cupin, GLYCEROL, ZINC ION
著者Fredslund, F, Teze, D, Welner, D.H.
登録日2022-05-24
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献BeKdgF with Ca
To Be Published
7U1I
DownloadVisualize
BU of 7u1i by Molmil
Crystal structure of Pisum sativum vicilin
分子名称: Vicilin
著者Beavington, B.A.G, Bakestani, I.D, Robinson, K.A, Loewen, M.C.
登録日2022-02-21
公開日2022-03-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Pea and lentil 7S globulin crystal structures with comparative immunoglobulin epitope mapping.
Food Chem (Oxf), 5, 2022
5CX8
DownloadVisualize
BU of 5cx8 by Molmil
Structure of RagB, a major immunodominant virulence factor of Porphyromonas gingivalis.
分子名称: 3-deoxy-5-O-phosphono-beta-D-ribofuranose, 3-deoxy-beta-D-glucopyranose, 6-O-phosphono-D-tagatose, ...
著者Goulas, T, Garcia-Ferrer, I, Hutcherson, J.A, Potempa, B.A, Potempa, J, Scott, D.A, Gomis-Ruth, F.X.
登録日2015-07-28
公開日2015-10-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of RagB, a major immunodominant outer-membrane surface receptor antigen of Porphyromonas gingivalis.
Mol Oral Microbiol, 31, 2016
6W22
DownloadVisualize
BU of 6w22 by Molmil
ClpA Engaged1 State bound to RepA-GFP (ClpA Focused Refinement)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ...
著者Lopez, K.L, Rizo, A.N, Tse, E, Lin, J, Scull, N.W, Thwin, A.C, Lucius, A.L, Shorter, J, Southworth, D.R.
登録日2020-03-04
公開日2020-04-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Conformational plasticity of the ClpAP AAA+ protease couples protein unfolding and proteolysis.
Nat.Struct.Mol.Biol., 27, 2020
5I3X
DownloadVisualize
BU of 5i3x by Molmil
Crystal structure of BACE1 in complex with aminoquinoline inhibitor 6
分子名称: Beta-secretase 1, GLYCEROL, N-(1-{3-[2-(2-amino-3-{3-[(3,3-dimethylbutyl)amino]-3-oxopropyl}quinolin-6-yl)phenyl]prop-2-yn-1-yl}cyclopropyl)-4-fluorobenzamide
著者Whittington, D.A, Long, A.M.
登録日2016-02-11
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Fragment-Linking Approach Using (19)F NMR Spectroscopy To Obtain Highly Potent and Selective Inhibitors of beta-Secretase.
J.Med.Chem., 59, 2016
6GG6
DownloadVisualize
BU of 6gg6 by Molmil
Crystal structure of M2 PYK in complex with Serine.
分子名称: MAGNESIUM ION, PHOSPHATE ION, POTASSIUM ION, ...
著者McNae, I.W, Yuan, M, Walkinshaw, M.D.
登録日2018-05-02
公開日2018-05-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.
Biochem. J., 475, 2018
4YJQ
DownloadVisualize
BU of 4yjq by Molmil
SYK kinase domain in complex with inhibitor GTC000224
分子名称: 3-[1H-indazol-4-yl(2-{[3-(4-methyl-1,3-oxazol-5-yl)phenyl]amino}pyrimidin-4-yl)amino]propan-1-ol, Tyrosine-protein kinase SYK
著者Somers, D.O, Neu, M, Stuckey, J.
登録日2015-03-03
公開日2015-09-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Discovery of GSK143, a highly potent, selective and orally efficacious spleen tyrosine kinase inhibitor.
Bioorg. Med. Chem. Lett., 21, 2011

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon