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PDB: 53012 件

7BLP
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BU of 7blp by Molmil
Vps35/Vps29 arch of fungal membrane-assembled retromer:Grd19 complex
分子名称: Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35
著者Leneva, N, Kovtun, O, Morado, D.R, Briggs, J.A.G, Owen, D.J.
登録日2021-01-18
公開日2021-02-10
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Architecture and mechanism of metazoan retromer:SNX3 tubular coat assembly.
Sci Adv, 7, 2021
6NIN
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BU of 6nin by Molmil
Rhodobacter sphaeroides bc1 with STIGMATELLIN A
分子名称: 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Cytochrome b, Cytochrome c1, ...
著者Xia, D, Zhou, F, Esser, L.
登録日2018-12-31
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Crystal structure of bacterial cytochromebc1in complex with azoxystrobin reveals a conformational switch of the Rieske iron-sulfur protein subunit.
J.Biol.Chem., 294, 2019
8FI2
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BU of 8fi2 by Molmil
Structure of Lettuce C20T bound to DFHBI-1T
分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, Lettuce DNA aptamer, MAGNESIUM ION, ...
著者Passalacqua, L.F.M, Ferre-D'Amare, A.R.
登録日2022-12-15
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Intricate 3D architecture of a DNA mimic of GFP.
Nature, 618, 2023
5N7M
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BU of 5n7m by Molmil
Protruding domain of GI.1 norovirus in complex with 2-fucosyllactose (2FL)
分子名称: 1,2-ETHANEDIOL, Capsid protein VP1, SODIUM ION, ...
著者Hansman, G.S, Koromyslova, A.D.
登録日2017-02-20
公開日2017-05-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Human norovirus inhibition by a human milk oligosaccharide.
Virology, 508, 2017
8FI1
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BU of 8fi1 by Molmil
Structure of Lettuce C20G bound to DFHO
分子名称: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, Lettuce DNA aptamer, MAGNESIUM ION, ...
著者Passalacqua, L.F.M, Ferre-D'Amare, A.R.
登録日2022-12-15
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Intricate 3D architecture of a DNA mimic of GFP.
Nature, 618, 2023
8FI0
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BU of 8fi0 by Molmil
Structure of Lettuce aptamer bound to DFAME
分子名称: Lettuce DNA aptamer, MAGNESIUM ION, POTASSIUM ION, ...
著者Passalacqua, L.F.M, Ferre-D'Amare, A.R.
登録日2022-12-15
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Intricate 3D architecture of a DNA mimic of GFP.
Nature, 618, 2023
8FI7
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BU of 8fi7 by Molmil
Structure of Lettuce C20T bound to DFHO
分子名称: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, Lettuce DNA aptamer, MAGNESIUM ION, ...
著者Passalacqua, L.F.M, Ferre-D'Amare, A.R.
登録日2022-12-15
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Intricate 3D architecture of a DNA mimic of GFP.
Nature, 618, 2023
5NH8
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BU of 5nh8 by Molmil
Crystal structure of xylose isomerase from Piromyces E2 in complex with two Ca2+ ions and xylose
分子名称: CALCIUM ION, D-xylose, SULFATE ION, ...
著者Rozeboom, H.J, Janssen, D.B.
登録日2017-03-21
公開日2017-11-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
8FHX
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BU of 8fhx by Molmil
Structure of Lettuce aptamer bound to DFHBI-1T
分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, Lettuce DNA aptamer, MAGNESIUM ION, ...
著者Passalacqua, L.F.M, Ferre-D'Amare, A.R.
登録日2022-12-15
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Intricate 3D architecture of a DNA mimic of GFP.
Nature, 618, 2023
8DB0
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BU of 8db0 by Molmil
Crystal structure of DMATS1 prenyltransferase in complex with L-Trp and DMSPP
分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DIMETHYLALLYL S-THIOLODIPHOSPHATE, ...
著者Eaton, S.A, Ronnebaum, T.A, Roose, B.W, Christianson, D.W.
登録日2022-06-14
公開日2022-09-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structural Basis of Substrate Promiscuity and Catalysis by the Reverse Prenyltransferase N -Dimethylallyl-l-tryptophan Synthase from Fusarium fujikuroi .
Biochemistry, 61, 2022
4X4O
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BU of 4x4o by Molmil
Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix and CTP
分子名称: CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, G70A tRNA minihelix, ...
著者Kuhn, C.-D, Joshua-Tor, L.
登録日2014-12-03
公開日2015-02-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献On-Enzyme Refolding Permits Small RNA and tRNA Surveillance by the CCA-Adding Enzyme.
Cell, 160, 2015
6PZN
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BU of 6pzn by Molmil
Putative SDR from Acinetobacter baumannii Crystal Form 2
分子名称: 3-ketoacyl-ACP reductase
著者Cross, E.M, Aragao, D, Forwood, J.K.
登録日2019-08-01
公開日2019-08-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural characterization of a short-chain dehydrogenase/reductase from multi-drug resistant Acinetobacter baumannii.
Biochem.Biophys.Res.Commun., 518, 2019
6PSC
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BU of 6psc by Molmil
Antibody scFv-M204 trimeric state
分子名称: scFv-M204 antibody
著者Abskharon, R, Sawaya, M.R, Seidler, P.M, Cascio, D, Eisenberg, D.S.
登録日2019-07-12
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Crystal structure of a conformational antibody that binds tau oligomers and inhibits pathological seeding by extracts from donors with Alzheimer's disease.
J.Biol.Chem., 295, 2020
6PWD
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BU of 6pwd by Molmil
Ewingella americana HopBF1 kinase
分子名称: 1,2-ETHANEDIOL, SULFATE ION, Type III effector HopBF1
著者Tomchick, D.R, Tagliabracci, V.S, Park, B.C.
登録日2019-07-22
公開日2019-09-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献A Bacterial Effector Mimics a Host HSP90 Client to Undermine Immunity.
Cell, 179, 2019
6PWG
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BU of 6pwg by Molmil
Ewingella americana HopBF1 kinase bound to AMP-PNP
分子名称: 1,2-ETHANEDIOL, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Type III effector HopBF1
著者Tomchick, D.R, Tagliabracci, V.S, Park, B.C.
登録日2019-07-23
公開日2019-09-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献A Bacterial Effector Mimics a Host HSP90 Client to Undermine Immunity.
Cell, 179, 2019
7TN0
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BU of 7tn0 by Molmil
SARS-CoV-2 Omicron RBD in complex with human ACE2 and S304 Fab and S309 Fab
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者McCallum, M, Czudnochowski, N, Nix, J.C, Croll, T.I, SSGCID, Dillen, J.R, Snell, G, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2022-01-20
公開日2022-02-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural basis of SARS-CoV-2 Omicron immune evasion and receptor engagement.
Science, 375, 2022
6PXF
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BU of 6pxf by Molmil
Structure of human Cathepsin K with an ectosteric inhibitor at 1.85 Angstrom resolution
分子名称: 1,6,6-trimethyl-10,11-dioxo-6,7,8,9,10,11-hexahydrophenanthro[1,2-b]furan-2-sulfonic acid, Cathepsin K
著者Law, S, Aguda, A.H, Nguyen, N.T, Brayer, G.D, Bromme, D.
登録日2019-07-25
公開日2020-07-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of human Cathepsin K with an ectosteric inhibitor at 1.85 Angstrom resolution
To Be Published
8FIT
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BU of 8fit by Molmil
Multi-state design of two-state switchable hinge proteins
分子名称: cs074A
著者Bera, A.K, Praetorius, F, Baker, D.
登録日2022-12-16
公開日2023-08-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
6NB9
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BU of 6nb9 by Molmil
Amyloid-Beta (20-34) with L-isoaspartate 23
分子名称: Amyloid-beta A4 protein
著者Sawaya, M.R, Warmack, R.A, Boyer, D.R, Zee, C.T, Richards, L.S, Cascio, D, Gonen, T, Clarke, S.G, Eisenberg, D.S.
登録日2018-12-06
公開日2019-08-07
最終更新日2022-09-07
実験手法ELECTRON CRYSTALLOGRAPHY (1.05 Å)
主引用文献Structure of amyloid-beta (20-34) with Alzheimer's-associated isomerization at Asp23 reveals a distinct protofilament interface.
Nat Commun, 10, 2019
6GTS
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BU of 6gts by Molmil
Structure of the AtaT-AtaR complex bound DNA
分子名称: Acetyltransferase, DNA, DUF1778 domain-containing protein
著者Garcia-Pino, A, Jurenas, D.
登録日2018-06-19
公開日2019-03-06
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.357 Å)
主引用文献Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system.
Nat. Chem. Biol., 15, 2019
6Q4B
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BU of 6q4b by Molmil
CDK2 in complex with FragLite13
分子名称: 5-bromanylpyrimidine, Cyclin-dependent kinase 2
著者Wood, D.J, Martin, M.P, Noble, M.E.M.
登録日2018-12-05
公開日2019-03-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献FragLites-Minimal, Halogenated Fragments Displaying Pharmacophore Doublets. An Efficient Approach to Druggability Assessment and Hit Generation.
J.Med.Chem., 62, 2019
6ZN8
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BU of 6zn8 by Molmil
Crystal structure of the H. influenzae VapXD toxin-antitoxin complex
分子名称: Endoribonuclease VapD, VapX
著者Bertelsen, M.B, Senissar, M, Nielsen, M.H, Bisiak, F, Cunha, M.V, Molinaro, A.L, Daines, D.A, Brodersen, D.E.
登録日2020-07-06
公開日2020-11-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.211 Å)
主引用文献Structural Basis for Toxin Inhibition in the VapXD Toxin-Antitoxin System.
Structure, 29, 2021
6NIY
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BU of 6niy by Molmil
A high-resolution cryo-electron microscopy structure of a calcitonin receptor-heterotrimeric Gs protein complex
分子名称: Calcitonin, Calcitonin receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者dal Maso, E, Glukhova, A, Zhu, Y, Garcia-Nafria, J, Tate, C.G, Atanasio, S, Reynolds, C.A, Ramirez-Aportela, E, Carazo, J.-M, Hick, C.A, Furness, S.G.B, Hay, D.L, Liang, Y.-L, Miller, L.J, Christopoulos, A, Wang, M.-W, Wootten, D, Sexton, P.M.
登録日2019-01-02
公開日2019-01-23
最終更新日2020-04-08
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献The Molecular Control of Calcitonin Receptor Signaling.
Acs Pharmacol Transl Sci, 2, 2019
8FJE
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BU of 8fje by Molmil
The five-repeat design E8
分子名称: E8
著者Bera, A.K, An, L, Baker, D.
登録日2022-12-19
公開日2023-09-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Hallucination of closed repeat proteins containing central pockets.
Nat.Struct.Mol.Biol., 30, 2023
8FJG
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The two-repeat design H12
分子名称: H12
著者Bera, A.K, An, L, Baker, D.
登録日2022-12-19
公開日2023-09-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Hallucination of closed repeat proteins containing central pockets.
Nat.Struct.Mol.Biol., 30, 2023

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