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PDB: 53012 件

5A5D
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A complex of the synthetic siderophore analogue Fe(III)-5-LICAM with the CeuE periplasmic protein from Campylobacter jejuni
分子名称: ENTEROCHELIN UPTAKE PERIPLASMIC BINDING PROTEIN, FE (III) ION, N,N'-pentane-1,5-diylbis(2,3-dihydroxybenzamide)
著者Blagova, E, Hughes, A, Moroz, O.V, Raines, D.J, Wilde, E.J, Turkenburg, J.P, Duhme-Klair, A.-K, Wilson, K.S.
登録日2015-06-17
公開日2016-06-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
1AL2
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P1/MAHONEY POLIOVIRUS, SINGLE SITE MUTANT V1160I
分子名称: MYRISTIC ACID, P1/MAHONEY POLIOVIRUS, SPHINGOSINE
著者Wien, M.W, Curry, S, Filman, D.J, Hogle, J.M.
登録日1997-06-09
公開日1997-11-19
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural studies of poliovirus mutants that overcome receptor defects.
Nat.Struct.Biol., 4, 1997
1A72
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AN ACTIVE-SITE DOUBLE MUTANT (PHE93->TRP, VAL203->ALA) OF HORSE LIVER ALCOHOL DEHYDROGENASE IN COMPLEX WITH THE ISOSTERIC NAD ANALOG CPAD
分子名称: 5-BETA-D-RIBOFURANOSYLPICOLINAMIDE ADENINE-DINUCLEOTIDE, HORSE LIVER ALCOHOL DEHYDROGENASE, ZINC ION
著者Colby, T.D, Bahnson, B.J, Chin, J.K, Klinman, J.P, Goldstein, B.M.
登録日1998-03-19
公開日1998-06-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Active site modifications in a double mutant of liver alcohol dehydrogenase: structural studies of two enzyme-ligand complexes.
Biochemistry, 37, 1998
152D
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DIVERSITY OF WATER RING SIZE AT DNA INTERFACES: HYDRATION AND DYNAMICS OF DNA-ANTHRACYCLINE COMPLEXES
分子名称: DAUNOMYCIN, DNA (5'-D(*CP*GP*AP*TP*CP*G)-3')
著者Lipscomb, L.A, Peek, M.E, Zhou, F.X, Bertrand, J.A, VanDerveer, D, Williams, L.D.
登録日1993-12-13
公開日1994-05-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Water ring structure at DNA interfaces: hydration and dynamics of DNA-anthracycline complexes.
Biochemistry, 33, 1994
1A7G
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THE CRYSTAL STRUCTURE OF THE E2 DNA-BINDING DOMAIN FROM HUMAN PAPILLOMAVIRUS AT 2.4 ANGSTROMS
分子名称: REGULATORY PROTEIN E2, SULFATE ION
著者Bussiere, D.E, Giranda, V.L.
登録日1998-03-13
公開日1999-04-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the E2 DNA-binding domain from human papillomavirus serotype 31 at 2.4 A.
Acta Crystallogr.,Sect.D, 54, 1998
1A5Y
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PROTEIN TYROSINE PHOSPHATASE 1B CYSTEINYL-PHOSPHATE INTERMEDIATE
分子名称: PROTEIN TYROSINE PHOSPHATASE 1B
著者Pannifer, A.D.P, Flint, A.J, Tonks, N.K, Barford, D.
登録日1998-02-19
公開日1998-06-17
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Visualization of the cysteinyl-phosphate intermediate of a protein-tyrosine phosphatase by x-ray crystallography.
J.Biol.Chem., 273, 1998
4U2Z
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X-ray crystal structure of an Sco GlgEI-V279S/1,2,2-trifluromaltose complex
分子名称: Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1, alpha-D-glucopyranose-(1-4)-2-deoxy-2,2-difluoro-alpha-D-arabino-hexopyranosyl fluoride
著者Ronning, D.R, Lindenberger, J.J.
登録日2014-07-18
公開日2015-07-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Synthesis of 2-deoxy-2,2-difluoro-alpha-maltosyl fluoride and its X-ray structure in complex with Streptomyces coelicolor GlgEI-V279S.
Org.Biomol.Chem., 13, 2015
1AI2
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ISOCITRATE DEHYDROGENASE COMPLEXED WITH ISOCITRATE, NADP+, AND CALCIUM (FLASH-COOLED)
分子名称: ISOCITRATE CALCIUM COMPLEX, ISOCITRATE DEHYDROGENASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Stoddard, B.L, Mesecar, A, Koshland Junior, D.E.
登録日1997-04-30
公開日1997-10-15
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Orbital steering in the catalytic power of enzymes: small structural changes with large catalytic consequences.
Science, 277, 1997
1AMP
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CRYSTAL STRUCTURE OF AEROMONAS PROTEOLYTICA AMINOPEPTIDASE: A PROTOTYPICAL MEMBER OF THE CO-CATALYTIC ZINC ENZYME FAMILY
分子名称: AMINOPEPTIDASE, ZINC ION
著者Chevrier, B, Schalk, C, D'Orchymont, H, Rondeau, J.M, Moras, D, Tarnus, C.
登録日1994-04-22
公開日1994-08-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Aeromonas proteolytica aminopeptidase: a prototypical member of the co-catalytic zinc enzyme family.
Structure, 2, 1994
1AMJ
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STERIC AND CONFORMATIONAL FEATURES OF THE ACONITASE MECHANISM
分子名称: ACONITASE, HYDROXIDE ION, IRON/SULFUR CLUSTER, ...
著者Stout, C.D.
登録日1994-11-11
公開日1995-01-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Steric and conformational features of the aconitase mechanism.
Proteins, 22, 1995
4UB3
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DNA polymerase beta closed product complex with a templating cytosine and 8-oxodGMP, 60 s
分子名称: 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*(8OG))-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Wilson, S.H, Beard, W.A.
登録日2014-08-11
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide.
Nature, 517, 2015
4UBB
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DNA polymerase beta reactant complex with a templating cytosine and incoming 8-oxodGTP, 40 s
分子名称: 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*(8OG))-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Wilson, S.H, Beard, W.A.
登録日2014-08-12
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide.
Nature, 517, 2015
1ADU
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EARLY E2A DNA-BINDING PROTEIN
分子名称: ADENOVIRUS SINGLE-STRANDED DNA-BINDING PROTEIN, ZINC ION
著者Tucker, P.A, Kanellopoulos, P.N, Tsernoglou, D, Van Der Vliet, P.C.
登録日1995-05-11
公開日1996-06-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Alternative arrangements of the protein chain are possible for the adenovirus single-stranded DNA binding protein.
J.Mol.Biol., 257, 1996
1A0D
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XYLOSE ISOMERASE FROM BACILLUS STEAROTHERMOPHILUS
分子名称: MANGANESE (II) ION, XYLOSE ISOMERASE
著者Gallay, O, Chopra, R, Conti, E, Brick, P, Blow, D.
登録日1997-11-28
公開日1998-06-03
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structures of Class II Xylose Isomerases from Two Thermophiles and a Hyperthermophile
To be Published
1AGX
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REFINED CRYSTAL STRUCTURE OF ACINETOBACTER GLUTAMINASIFICANS GLUTAMINASE-ASPARAGINASE
分子名称: GLUTAMINASE-ASPARAGINASE
著者Lubkowski, J, Wlodawer, A, Housset, D, Weber, I.T, Ammon, H.L, Murphy, K.C, Swain, A.L.
登録日1994-07-13
公開日1994-12-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Refined crystal structure of Acinetobacter glutaminasificans glutaminase-asparaginase.
Acta Crystallogr.,Sect.D, 50, 1994
4UAY
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DNA polymerase beta product complex with a templating adenine and inserted 8-oxodGMP, 40 s
分子名称: 5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*(8OG))-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Wilson, S.H, Beard, W.A.
登録日2014-08-11
公開日2014-11-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.984 Å)
主引用文献Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide.
Nature, 517, 2015
1AFL
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RIBONUCLEASE A IN COMPLEX WITH 5'-DIPHOSPHOADENOSINE 2'-PHOSPHATE AT 1.7 ANGSTROM RESOLUTION
分子名称: 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, CITRIC ACID, RIBONUCLEASE A
著者Leonidas, D.D, Acharya, K.R.
登録日1997-03-08
公開日1998-03-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of ribonuclease A complexes with 5'-diphosphoadenosine 3'-phosphate and 5'-diphosphoadenosine 2'-phosphate at 1.7 A resolution.
Biochemistry, 36, 1997
1A99
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PUTRESCINE RECEPTOR (POTF) FROM E. COLI
分子名称: 1,4-DIAMINOBUTANE, PUTRESCINE-BINDING PROTEIN
著者Vassylyev, D.G, Tomitori, H, Kashiwagi, K, Morikawa, K, Igarashi, K.
登録日1998-04-17
公開日1998-10-21
最終更新日2020-04-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure and mutational analysis of the Escherichia coli putrescine receptor. Structural basis for substrate specificity.
J.Biol.Chem., 273, 1998
4UB4
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DNA polymerase beta substrate complex with a templating cytosine and incoming dGTP, 0 s
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', ...
著者Freudenthal, B.D, Wilson, S.H, Beard, W.A.
登録日2014-08-11
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide.
Nature, 517, 2015
1AJ2
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CRYSTAL STRUCTURE OF A BINARY COMPLEX OF E. COLI DIHYDROPTEROATE SYNTHASE
分子名称: DIHYDROPTEROATE SYNTHASE, SULFATE ION, [7,8-DIHYDRO-PTERIN-6-YL METHANYL]-PHOSPHONOPHOSPHATE
著者Achari, A, Somers, D.O, Champness, J.N, Bryant, P.K, Rosemond, J, Stammers, D.K.
登録日1997-05-14
公開日1998-05-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the anti-bacterial sulfonamide drug target dihydropteroate synthase.
Nat.Struct.Biol., 4, 1997
4UAW
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DNA polymerase beta substrate complex with a templating adenine and incoming 8-oxodGTP, 0 s
分子名称: 5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Wilson, S.H, Beard, W.A.
登録日2014-08-11
公開日2014-11-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide.
Nature, 517, 2015
4UB5
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DNA polymerase beta substrate complex with a templating cytosine, incoming 8-oxodGTP, and Mn2+, 5 s
分子名称: 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Wilson, S.H, Beard, W.A.
登録日2014-08-11
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide.
Nature, 517, 2015
1A0N
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NMR STUDY OF THE SH3 DOMAIN FROM FYN PROTO-ONCOGENE TYROSINE KINASE COMPLEXED WITH THE SYNTHETIC PEPTIDE P2L CORRESPONDING TO RESIDUES 91-104 OF THE P85 SUBUNIT OF PI3-KINASE, FAMILY OF 25 STRUCTURES
分子名称: FYN, PRO-PRO-ARG-PRO-LEU-PRO-VAL-ALA-PRO-GLY-SER-SER-LYS-THR
著者Renzoni, D.A, Pugh, D.J.R, Siligardi, G, Das, P, Morton, C.J, Rossi, C, Waterfield, M.D, Campbell, I.D, Ladbury, J.E.
登録日1997-12-05
公開日1998-02-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural and thermodynamic characterization of the interaction of the SH3 domain from Fyn with the proline-rich binding site on the p85 subunit of PI3-kinase.
Biochemistry, 35, 1996
4UMM
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The Cryo-EM structure of the palindromic DNA-bound USP-EcR nuclear receptor reveals an asymmetric organization with allosteric domain positioning
分子名称: 2,3,14,20,22-PENTAHYDROXYCHOLEST-7-EN-6-ONE, 5'-D(*CP*AP*AP*GP*GP*GP*TP*TP*CP*AP*AP*TP*GP*CP *AP*CP*TP*TP*GP*TP)-3', 5'-D(*DGP*AP*CP*AP*AP*GP*TP*GP*CP*AP*TP*TP*GP*DAP *AP*CP*CP*CP*TP*T)-3', ...
著者Maletta, M, Orlov, I, Moras, D, Billas, I.M.L, Klaholz, B.P.
登録日2014-05-19
公開日2014-06-25
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (11.6 Å)
主引用文献The Palindromic DNA-Bound Usp-Ecr Nuclear Receptor Adopts an Asymmetric Organization with Allosteric Domain Positioning.
Nat.Commun., 5, 2014
4UB1
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DNA polymerase beta product complex with a templating adenine and 8-oxodGMP, 90 s
分子名称: 5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*(8OG))-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Wilson, S.H, Beard, W.A.
登録日2014-08-11
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.341 Å)
主引用文献Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide.
Nature, 517, 2015

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