Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52974 件

6PVH
DownloadVisualize
BU of 6pvh by Molmil
Crystal structure of PhqK in complex with paraherquamide K
分子名称: (7aS,12S,12aR,13aS)-3,3,12,14,14-pentamethyl-3,7,11,12,13,13a,14,15-octahydro-8H,10H-7a,12a-(epiminomethano)indolizino[6,7-h]pyrano[3,2-a]carbazol-16-one, FAD monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE
著者Fraley, A.E, Smith, J.L, Sherman, D.H.
登録日2019-07-20
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Molecular Basis for Spirocycle Formation in the Paraherquamide Biosynthetic Pathway.
J.Am.Chem.Soc., 142, 2020
8IJ6
DownloadVisualize
BU of 8ij6 by Molmil
Crystal structure of alcohol dehydrogenase from Burkholderia gladioli with NADP
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative short-chain dehydrogenases/reductase family protein
著者Han, X, Mei, Z.L, Liu, W.D, Sun, Z.T, Ma, J.A.
登録日2023-02-26
公開日2024-02-28
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal structure of alcohol dehydrogenase from Burkholderia gladioli with NADP
To Be Published
8IJ8
DownloadVisualize
BU of 8ij8 by Molmil
Crystal structure of alcohol dehydrogenase M4 mutant from Burkholderia gladioli
分子名称: Putative short-chain dehydrogenases/reductase family protein
著者Han, X, Mei, Z.L, Liu, W.D, Sun, Z.T, Ma, J.A.
登録日2023-02-26
公開日2024-02-28
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal structure of alcohol dehydrogenase M4 mutant from Burkholderia gladioli
To Be Published
6PVB
DownloadVisualize
BU of 6pvb by Molmil
The structure of NTMT1 in complex with compound 6
分子名称: AMINO GROUP-()-(2~{S})-2-azanylpropanal-()-ISOLEUCINE-()-ARGININE-()-LYSINE-()-PROLINE-()-AMINO-ACETALDEHYDE-()-9-(5-{[(3S)-3-amino-3-carboxypropyl](pentyl)amino}-5-deoxy-beta-L-arabinofuranosyl)-9H-purin-6-amine, N-terminal Xaa-Pro-Lys N-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
著者Noinaj, N, Chen, D, Huang, R.
登録日2019-07-20
公開日2020-08-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Probing the Plasticity in the Active Site of Protein N-terminal Methyltransferase 1 Using Bisubstrate Analogues.
J.Med.Chem., 63, 2020
6PVI
DownloadVisualize
BU of 6pvi by Molmil
Crystal structure of PhqK in complex with paraherquamide L
分子名称: (8aS,13S,13aR,14aS)-4,4,13,15,15-pentamethyl-12,13,14,14a,15,16-hexahydro-4H,8H,9H,11H-8a,13a-(epiminomethano)[1,4]dioxepino[2,3-a]indolizino[6,7-h]carbazol-17-one, FAD monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE
著者Fraley, A.E, Smith, J.L, Sherman, D.H.
登録日2019-07-20
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.093 Å)
主引用文献Molecular Basis for Spirocycle Formation in the Paraherquamide Biosynthetic Pathway.
J.Am.Chem.Soc., 142, 2020
8IJ7
DownloadVisualize
BU of 8ij7 by Molmil
Crystal structure of alcohol dehydrogenase from Burkholderia gladioli
分子名称: Putative short-chain dehydrogenases/reductase family protein
著者Han, X, Mei, Z.L, Liu, W.D, Sun, Z.T, Ma, J.A.
登録日2023-02-26
公開日2024-02-28
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Crystal structure of alcohol dehydrogenase from Burkholderia gladioli
To Be Published
8II9
DownloadVisualize
BU of 8ii9 by Molmil
crystal structure of Hyp mutant from Hypoxylon sp. E7406B
分子名称: Terpene synthase
著者Gao, J, Liu, W.D, Li, Q, Han, X, Wei, H.L, Dai, Z.J, Su, L.Q.
登録日2023-02-24
公開日2024-02-28
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献crystal structure of Hyp
to be published
6Q1D
DownloadVisualize
BU of 6q1d by Molmil
Holo YfeA reconstituted by zinc soaking
分子名称: Periplasmic chelated iron-binding protein YfeA, ZINC ION
著者Radka, C.D, Labiuk, S.L, DeLucas, L.J, Aller, S.G.
登録日2019-08-03
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structures of the substrate-binding protein YfeA in apo and zinc-reconstituted holo forms.
Acta Crystallogr D Struct Biol, 75, 2019
4RIM
DownloadVisualize
BU of 4rim by Molmil
Native structure of intercalation-locked DNA tetraplex
分子名称: DNA (5'-D(*AP*CP*TP*CP*GP*GP*AP*TP*GP*AP*T)-3')
著者Tripathi, S.K, Zhang, D, Paukstelis, P.
登録日2014-10-06
公開日2015-02-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献An intercalation-locked parallel-stranded DNA tetraplex.
Nucleic Acids Res., 43, 2015
2IOQ
DownloadVisualize
BU of 2ioq by Molmil
Crystal Structure of full-length HTPG, the Escherichia coli HSP90
分子名称: Chaperone protein htpG
著者Shiau, A.K, Harris, S.F, Agard, D.A.
登録日2006-10-10
公開日2006-11-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural Analysis of E. coli hsp90 reveals dramatic nucleotide-dependent conformational rearrangements.
Cell(Cambridge,Mass.), 127, 2006
6Q7K
DownloadVisualize
BU of 6q7k by Molmil
ERK2 mini-fragment binding
分子名称: 1H-imidazol-2-amine, Mitogen-activated protein kinase 1, SULFATE ION
著者O'Reilly, M, Cleasby, A, Davies, T.G, Hall, R, Ludlow, F, Murray, C.W, Tisi, D, Jhoti, H.
登録日2018-12-13
公開日2019-03-27
最終更新日2019-05-22
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Crystallographic screening using ultra-low-molecular-weight ligands to guide drug design.
Drug Discov Today, 24, 2019
2IJF
DownloadVisualize
BU of 2ijf by Molmil
Crystal Structure of the Poliovirus RNA-Dependent RNA Polymerase Fidelity Mutant 3Dpol G64S
分子名称: RNA-directed RNA polymerase
著者Marcotte, L.L, Gohara, D.G, Filman, D.J, Hogle, J.M.
登録日2006-09-29
公開日2007-02-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of poliovirus 3CD: virally-encoded protease and precursor to the RNA-dependent RNA polymerase.
J.Virol., 81, 2007
8IHA
DownloadVisualize
BU of 8iha by Molmil
Polyketone cyclase Rv2186c in Mycobacterium tuberculosis H37Rv
分子名称: Polyketide cyclase / dehydrase and lipid transport
著者Chen, Y.J, Su, D.
登録日2023-02-22
公開日2024-03-06
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Crystal structure of polyketone cyclase Rv2186c in Mycobacterium tuberculosis H37Rv
To Be Published
6QEG
DownloadVisualize
BU of 6qeg by Molmil
CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX WITH AN INHIBITOR 2-Oxo-1-phenyl-pyrrolidine-3-carboxylic acid (2-thiophen-2-yl-ethyl)-amide
分子名称: (3~{S})-3-oxidanyl-2-oxidanylidene-1-phenyl-~{N}-(2-thiophen-2-ylethyl)pyrrolidine-3-carboxamide, GLYCEROL, MANGANESE (II) ION, ...
著者Musil, D, Heinrich, T, Lehmann, M.
登録日2019-01-07
公開日2019-05-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Discovery and Structure-Based Optimization of Next-Generation Reversible Methionine Aminopeptidase-2 (MetAP-2) Inhibitors.
J.Med.Chem., 62, 2019
2IYT
DownloadVisualize
BU of 2iyt by Molmil
Shikimate kinase from Mycobacterium tuberculosis in unliganded state, open LID (conf. A)
分子名称: CHLORIDE ION, SHIKIMATE KINASE
著者Hartmann, M.D, Bourenkov, G.P, Oberschall, A, Strizhov, N, Bartunik, H.D.
登録日2006-07-22
公開日2006-10-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Mechanism of Phosphoryl Transfer Catalyzed by Shikimate Kinase from Mycobacterium Tuberculosis.
J.Mol.Biol., 364, 2006
5KSY
DownloadVisualize
BU of 5ksy by Molmil
hMiro1 C-domain GDP Complex P41212 Crystal Form
分子名称: GUANOSINE-5'-DIPHOSPHATE, Mitochondrial Rho GTPase 1
著者Klosowiak, J.L, Focia, P.J, Rice, S.E, Freymann, D.M.
登録日2016-07-10
公開日2016-09-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.482 Å)
主引用文献Structural insights into Parkin substrate lysine targeting from minimal Miro substrates.
Sci Rep, 6, 2016
4RR2
DownloadVisualize
BU of 4rr2 by Molmil
Crystal structure of human primase
分子名称: DNA primase large subunit, DNA primase small subunit, IRON/SULFUR CLUSTER, ...
著者Baranovskiy, A.G, Gu, J, Suwa, Y, Babayeva, N.D, Tahirov, T.H.
登録日2014-11-05
公開日2015-01-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure of the human primase.
J.Biol.Chem., 290, 2015
2J6B
DownloadVisualize
BU of 2j6b by Molmil
crystal structure of AFV3-109, a highly conserved protein from crenarchaeal viruses
分子名称: AFV3-109
著者Keller, J, Leulliot, N, Cambillau, C, Campanacci, V, Porciero, S, Prangishvili, D, Cortez, D, Quevillon-Cheruel, S, Van Tilbeurgh, H.
登録日2006-09-27
公開日2007-02-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of Afv3-109, a Highly Conserved Protein from Crenarchaeal Viruses.
Virol J., 4, 2007
4RWH
DownloadVisualize
BU of 4rwh by Molmil
Crystal structure of T cell costimulatory ligand B7-1 (CD80)
分子名称: T-lymphocyte activation antigen CD80
著者Fedorov, A.A, Fedorov, E.V, Samanta, D, Hillerich, B, Seidel, R.D, Almo, S.C.
登録日2014-12-04
公開日2014-12-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Crystal structure of T cell costimulatory ligand B7-1 (CD80)
To be Published
6JD2
DownloadVisualize
BU of 6jd2 by Molmil
Crystal structure of Sulfolobus solfataricus ketol-acid reductoisomerase (Sso-KARI) in complex with Mg2+ at pH8.5
分子名称: BETA-MERCAPTOETHANOL, MAGNESIUM ION, Putative ketol-acid reductoisomerase 2
著者Chen, C.Y, Chang, Y.C, Lin, K.F, Huang, C.H, Lin, B.L, Ko, T.P, Hsieh, D.L, Tsai, M.D.
登録日2019-01-30
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Use of Cryo-EM To Uncover Structural Bases of pH Effect and Cofactor Bispecificity of Ketol-Acid Reductoisomerase.
J.Am.Chem.Soc., 141, 2019
6JFV
DownloadVisualize
BU of 6jfv by Molmil
The crystal structure of 2B-2B complex from keratins 5 and 14 (C367A mutant of K14)
分子名称: Keratin, type I cytoskeletal 14, type II cytoskeletal 5
著者Kim, M.S, Lee, C.H, Coulombe, P.A, Leahy, D.J.
登録日2019-02-12
公開日2020-01-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-Function Analyses of a Keratin Heterotypic Complex Identify Specific Keratin Regions Involved in Intermediate Filament Assembly.
Structure, 28, 2020
7B5K
DownloadVisualize
BU of 7b5k by Molmil
E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.
分子名称: 16S rRNA, 2-[[[(3~{R},5~{R})-3-azanyl-6-(3-azanylpropylamino)-5-oxidanyl-hexanoyl]amino]-methyl-amino]ethanoic acid, 23S rRNA, ...
著者Albers, S, Beckert, B, Matthies, M, Schuster, R, Riedner, M, Seuring, C, Sanyal, S, Torda, A, Wilson, N.D, Ignatova, Z.
登録日2020-12-03
公開日2021-05-26
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Harnessing evolutionarily flexibility in tRNAs to maximize nonsense suppression activities
Nat Commun, 2021
1SVL
DownloadVisualize
BU of 1svl by Molmil
Co-crystal structure of SV40 large T antigen helicase domain and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ZINC ION, ...
著者Gai, D, Zhao, R, Finkielstein, C.V, Chen, X.S.
登録日2004-03-29
公開日2004-10-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen.
Cell(Cambridge,Mass.), 119, 2004
4R4P
DownloadVisualize
BU of 4r4p by Molmil
Crystal Structure of the VS ribozyme-A756G mutant
分子名称: MAGNESIUM ION, VS ribozyme RNA
著者Piccirilli, J.A, Suslov, N.B, Dasgupta, S, Huang, H, Lilley, D.M.J, Rice, P.A.
登録日2014-08-19
公開日2015-09-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献Crystal structure of the Varkud satellite ribozyme.
Nat.Chem.Biol., 11, 2015
6IDS
DownloadVisualize
BU of 6ids by Molmil
Crystal structure of Vibrio cholerae MATE transporter VcmN D35N mutant
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
著者Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
登録日2018-09-11
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon