Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 257 件

3UOZ
DownloadVisualize
BU of 3uoz by Molmil
Crystal Structure of OTEMO complex with FAD and NADP (form 2)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, OTEMO
著者Shi, R, Matte, A, Cygler, M, Lau, P.
登録日2011-11-17
公開日2012-02-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.407 Å)
主引用文献Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-{Delta}(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.
Appl.Environ.Microbiol., 78, 2012
3UOX
DownloadVisualize
BU of 3uox by Molmil
Crystal Structure of OTEMO (FAD bound form 2)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, OTEMO
著者Shi, R, Matte, A, Cygler, M, Lau, P.
登録日2011-11-17
公開日2012-02-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.956 Å)
主引用文献Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-{Delta}(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.
Appl.Environ.Microbiol., 78, 2012
3ILR
DownloadVisualize
BU of 3ilr by Molmil
Structure of Heparinase I from Bacteroides thetaiotaomicron in complex with tetrasaccharide product
分子名称: 1,2-ETHANEDIOL, 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(4-1)-4-deoxy-2-O-sulfo-beta-D-erythro-hex-4-enopyranuronic acid, 4-deoxy-2-O-sulfo-beta-D-erythro-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, ...
著者Garron, M.L, Cygler, M, Shaya, D.
登録日2009-08-07
公開日2009-09-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural snapshots of heparin depolymerization by heparin lyase I.
J.Biol.Chem., 284, 2009
3LA0
DownloadVisualize
BU of 3la0 by Molmil
Crystal Structure of UreE from Helicobacter pylori (metal of unknown identity bound)
分子名称: UNKNOWN ATOM OR ION, Urease accessory protein ureE
著者Shi, R, Munger, C, Assinas, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-01-06
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Crystal Structures of Apo and Metal-Bound Forms of the UreE Protein from Helicobacter pylori: Role of Multiple Metal Binding Sites
Biochemistry, 49, 2010
3L9Z
DownloadVisualize
BU of 3l9z by Molmil
Crystal Structure of UreE from Helicobacter pylori (apo form)
分子名称: Urease accessory protein ureE
著者Shi, R, Munger, C, Assinas, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-01-06
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Crystal Structures of Apo and Metal-Bound Forms of the UreE Protein from Helicobacter pylori: Role of Multiple Metal Binding Sites
Biochemistry, 49, 2010
1MFD
DownloadVisualize
BU of 1mfd by Molmil
THE SOLUTION STRUCTURE OF A TRISACCHARIDE-ANTIBODY COMPLEX: COMPARISON OF NMR MEASUREMENTS WITH A CRYSTAL STRUCTURE
分子名称: IGG1-LAMBDA SE155-4 FAB (HEAVY CHAIN), IGG1-LAMBDA SE155-4 FAB (LIGHT CHAIN), alpha-D-galactopyranose-(1-2)-[alpha-D-Abequopyranose-(1-3)]methyl alpha-D-mannopyranoside
著者Zdanov, A, Cygler, M.
登録日1993-10-25
公開日1994-01-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Solution structure of a trisaccharide-antibody complex: comparison of NMR measurements with a crystal structure.
Biochemistry, 33, 1994
3NY0
DownloadVisualize
BU of 3ny0 by Molmil
Crystal Structure of UreE from Helicobacter pylori (Ni2+ bound form)
分子名称: NICKEL (II) ION, Urease accessory protein ureE
著者Shi, R, Munger, C, Assinas, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-07-14
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Crystal Structures of Apo and Metal-Bound Forms of the UreE Protein from Helicobacter pylori: Role of Multiple Metal Binding Sites
Biochemistry, 49, 2010
3NXZ
DownloadVisualize
BU of 3nxz by Molmil
Crystal Structure of UreE from Helicobacter pylori (Cu2+ bound form)
分子名称: COPPER (II) ION, Urease accessory protein ureE
著者Shi, R, Munger, C, Assinas, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-07-14
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structures of Apo and Metal-Bound Forms of the UreE Protein from Helicobacter pylori: Role of Multiple Metal Binding Sites
Biochemistry, 49, 2010
3O39
DownloadVisualize
BU of 3o39 by Molmil
Crystal Structure of SPY
分子名称: CADMIUM ION, Periplasmic protein related to spheroblast formation
著者Ruane, K.M, Shi, R, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-07-23
公開日2011-02-16
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.599 Å)
主引用文献Genetic selection designed to stabilize proteins uncovers a chaperone called Spy.
Nat.Struct.Mol.Biol., 18, 2011
1F2E
DownloadVisualize
BU of 1f2e by Molmil
STRUCTURE OF SPHINGOMONAD, GLUTATHIONE S-TRANSFERASE COMPLEXED WITH GLUTATHIONE
分子名称: GLUTATHIONE, GLUTATHIONE S-TRANSFERASE
著者Nishio, T, Watanabe, T, Patel, A, Wang, Y, Lau, P.C.K, Grochulski, P, Li, Y, Cygler, M.
登録日2000-05-24
公開日2000-06-21
最終更新日2011-12-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Properties of a Sphingomonad and Marine Bacterium Beta-Class Glutathione S-Transferases and Crystal Structure of the Former Complex with Glutathione
To be published
1FG7
DownloadVisualize
BU of 1fg7 by Molmil
CRYSTAL STRUCTURE OF L-HISTIDINOL PHOSPHATE AMINOTRANSFERASE WITH PYRIDOXAL-5'-PHOSPHATE
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, HISTIDINOL PHOSPHATE AMINOTRANSFERASE
著者Sivaraman, J, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2000-07-28
公開日2001-08-22
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of histidinol phosphate aminotransferase (HisC) from Escherichia coli, and its covalent complex with pyridoxal-5'-phosphate and l-histidinol phosphate.
J.Mol.Biol., 311, 2001
1FC5
DownloadVisualize
BU of 1fc5 by Molmil
CRYSTAL STRUCTURE OF MOLYBDOPTERIN BIOSYNTHESIS MOEA PROTEIN
分子名称: MAGNESIUM ION, MOLYBDOPTERIN BIOSYNTHESIS MOEA PROTEIN
著者Huang, W, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2000-07-17
公開日2001-07-25
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of Escherichia coli MoeA, a protein from the molybdopterin synthesis pathway.
J.Mol.Biol., 310, 2001
1FC4
DownloadVisualize
BU of 1fc4 by Molmil
2-AMINO-3-KETOBUTYRATE COA LIGASE
分子名称: 2-AMINO-3-KETOBUTYRATE CONENZYME A LIGASE, 2-AMINO-3-KETOBUTYRIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Schmidt, A, Matte, A, Li, Y, Sivaraman, J, Larocque, R, Schrag, J.D, Smith, C, Sauve, V, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2000-07-17
公開日2001-05-02
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Three-dimensional structure of 2-amino-3-ketobutyrate CoA ligase from Escherichia coli complexed with a PLP-substrate intermediate: inferred reaction mechanism.
Biochemistry, 40, 2001
1FG3
DownloadVisualize
BU of 1fg3 by Molmil
CRYSTAL STRUCTURE OF L-HISTIDINOL PHOSPHATE AMINOTRANSFERASE COMPLEXED WITH L-HISTIDINOL
分子名称: HISTIDINOL PHOSPHATE AMINOTRANSFERASE, PHOSPHORIC ACID MONO-[2-AMINO-3-(3H-IMIDAZOL-4-YL)-PROPYL]ESTER, PYRIDOXAL-5'-PHOSPHATE
著者Sivaraman, J, Cygler, M.
登録日2000-07-27
公開日2001-08-22
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of histidinol phosphate aminotransferase (HisC) from Escherichia coli, and its covalent complex with pyridoxal-5'-phosphate and l-histidinol phosphate.
J.Mol.Biol., 311, 2001
3PNL
DownloadVisualize
BU of 3pnl by Molmil
Crystal Structure of E.coli Dha kinase DhaK-DhaL complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-11-19
公開日2011-01-12
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PNM
DownloadVisualize
BU of 3pnm by Molmil
Crystal Structure of E.coli Dha kinase DhaK (H56A)
分子名称: PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
著者Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-11-19
公開日2011-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PNK
DownloadVisualize
BU of 3pnk by Molmil
Crystal Structure of E.coli Dha kinase DhaK
分子名称: GLYCEROL, PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
著者Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-11-19
公開日2011-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PNQ
DownloadVisualize
BU of 3pnq by Molmil
Crystal Structure of E.coli Dha kinase DhaK (H56N) complex with Dha
分子名称: Dihydroxyacetone, PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
著者Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-11-19
公開日2011-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PNO
DownloadVisualize
BU of 3pno by Molmil
Crystal Structure of E.coli Dha kinase DhaK (H56N)
分子名称: PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
著者Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-11-19
公開日2011-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
1HBT
DownloadVisualize
BU of 1hbt by Molmil
Human alpha-thrombin complexed with a peptidyl pyridinium methyl ketone containing bivalent inhibitor
分子名称: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), P596 Inhibitor peptide
著者Rehse, P.H, Cygler, M.
登録日1995-04-06
公開日1995-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a peptidyl pyridinium methyl ketone inhibitor with thrombin.
Biochemistry, 34, 1995
1GZ0
DownloadVisualize
BU of 1gz0 by Molmil
23S RIBOSOMAL RNA G2251 2'O-METHYLTRANSFERASE RLMB
分子名称: HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH
著者Michel, G, Cygler, M.
登録日2002-05-03
公開日2002-10-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Structure of the Rlmb 23S Rrna Methyltransferase Reveals a New Methyltransferase Fold with a Unique Knot
Structure, 10, 2002
1HN0
DownloadVisualize
BU of 1hn0 by Molmil
CRYSTAL STRUCTURE OF CHONDROITIN ABC LYASE I FROM PROTEUS VULGARIS AT 1.9 ANGSTROMS RESOLUTION
分子名称: CHONDROITIN ABC LYASE I, SODIUM ION
著者Huang, W, Cygler, M.
登録日2000-12-05
公開日2003-04-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Proteus vulgaris Chondroitin Sulfate ABC Lyase I at 1.9 Angstroms Resolution
J.Mol.Biol., 328, 2003
1HMU
DownloadVisualize
BU of 1hmu by Molmil
ACTIVE SITE OF CHONDROITINASE AC LYASE REVEALED BY THE STRUCTURE OF ENZYME-OLIGOSACCHARIDE COMPLEXES AND MUTAGENESIS
分子名称: 2-O-methyl-beta-L-fucopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, ...
著者Huang, W, Boju, L, Tkalec, L, Su, H, Yang, H.O, Gunay, N.S, Linhardt, R.J, Kim, Y.S, Matte, A, Cygler, M.
登録日2000-12-05
公開日2001-05-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Active site of chondroitin AC lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis.
Biochemistry, 40, 2001
1HMW
DownloadVisualize
BU of 1hmw by Molmil
ACTIVE SITE OF CHONDROITINASE AC LYASE REVEALED BY THE STRUCTURE OF ENZYME-OLIGOSACCHARIDE COMPLEXES AND MUTAGENESIS
分子名称: 2-O-methyl-beta-L-fucopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-6-O-sulfo-beta-D-galactopyranose, CALCIUM ION, ...
著者Huang, W, Boju, L, Tkalec, L, Su, H, Yang, H.O, Gunay, N.S, Linhardt, R.J, Kim, Y.S, Matte, A, Cygler, M.
登録日2000-12-05
公開日2001-05-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Active site of chondroitin AC lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis.
Biochemistry, 40, 2001
1HM3
DownloadVisualize
BU of 1hm3 by Molmil
ACTIVE SITE OF CHONDROITINASE AC LYASE REVEALED BY THE STRUCTURE OF ENZYME-OLIGOSACCHARIDE COMPLEXES AND MUTAGENESIS
分子名称: 2-O-methyl-beta-L-fucopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose, CALCIUM ION, CHONDROITINASE AC, ...
著者Huang, W, Boju, L, Tkalec, L, Su, H, Yang, H.O, Gunay, N.S, Linhardt, R.J, Kim, Y.S, Matte, A, Cygler, M.
登録日2000-12-04
公開日2001-05-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Active site of chondroitin AC lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis.
Biochemistry, 40, 2001

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon