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PDB: 97 results

2IPM
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BU of 2ipm by Molmil
Crystal structure of a disulfide mutant glucose binding protein
Descriptor: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2006-10-12
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:The free energy cost of domain reorganization in E. coli glucose binding protein
To be Published
2IPN
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BU of 2ipn by Molmil
Crystal structure of a disulfide mutant glucose binding protein
Descriptor: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2006-10-12
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:The free energy cost of domain reorganization in E. coli glucose binding protein
To be Published
5UJX
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BU of 5ujx by Molmil
Crystal structure of DHFR in 20% Isopropanol
Descriptor: CALCIUM ION, CHLORIDE ION, Dihydrofolate reductase, ...
Authors:Cuneo, M.J, Agarwal, P.K.
Deposit date:2017-01-19
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Modulating Enzyme Activity by Altering Protein Dynamics with Solvent.
Biochemistry, 57, 2018
3C6Q
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BU of 3c6q by Molmil
Apo and ligand-bound form of a thermophilic glucose/xylose binding protein
Descriptor: Sugar ABC transporter, periplasmic sugar-binding protein, beta-D-xylopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2008-02-05
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Open to closed transition of a thermophilic glucose binding protein
To be Published
3I5O
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BU of 3i5o by Molmil
The X-ray crystal structure of a thermophilic cellobiose binding protein bound with cellopentaose
Descriptor: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2009-07-06
Release date:2009-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Analysis of Semi-specific Oligosaccharide Recognition by a Cellulose-binding Protein of Thermotoga maritima Reveals Adaptations for Functional Diversification of the Oligopeptide Periplasmic Binding Protein Fold.
J.Biol.Chem., 284, 2009
8DHD
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BU of 8dhd by Molmil
Neutron crystal structure of maltotetraose bound tmMBP
Descriptor: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, maltose-binding protein MalE2
Authors:Cuneo, M.J, Shukla, S, Myles, D.A.
Deposit date:2022-06-27
Release date:2022-10-12
Last modified:2023-10-25
Method:NEUTRON DIFFRACTION (1.7 Å), X-RAY DIFFRACTION
Cite:Mapping periplasmic binding protein oligosaccharide recognition with neutron crystallography.
Sci Rep, 12, 2022
2B3F
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BU of 2b3f by Molmil
Thermus thermophilus Glucose/Galactose Binding Protein Bound With Galactose
Descriptor: beta-D-galactopyranose, glucose-binding protein
Authors:Cuneo, M.J, Changela, A, Warren, J.J, Beese, L.S, Hellinga, H.W.
Deposit date:2005-09-20
Release date:2006-07-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:The crystal structure of a thermophilic glucose binding protein reveals adaptations that interconvert mono and di-saccharide binding sites.
J.Mol.Biol., 362, 2006
2B3B
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BU of 2b3b by Molmil
Thermus thermophilus Glucose/Galactose Binding Protein With Bound Glucose
Descriptor: alpha-D-glucopyranose, beta-D-glucopyranose, glucose-binding protein
Authors:Cuneo, M.J, Changela, A, Warren, J.J, Beese, L.S, Hellinga, H.W.
Deposit date:2005-09-20
Release date:2006-07-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The crystal structure of a thermophilic glucose binding protein reveals adaptations that interconvert mono and di-saccharide binding sites.
J.Mol.Biol., 362, 2006
6DTT
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BU of 6dtt by Molmil
Apo T. maritima MalE2
Descriptor: maltose-binding protein MalE2
Authors:Cuneo, M.J, Shukla, S.
Deposit date:2018-06-18
Release date:2018-09-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Differential Substrate Recognition by Maltose Binding Proteins Influenced by Structure and Dynamics.
Biochemistry, 57, 2018
3PC7
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BU of 3pc7 by Molmil
X-ray crystal structure of the DNA ligase III-alpha BRCT domain.
Descriptor: DNA ligase 3
Authors:Cuneo, M.J, Krahn, J.M, London, R.E.
Deposit date:2010-10-21
Release date:2011-06-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The structural basis for partitioning of the XRCC1/DNA ligase III-{alpha} BRCT-mediated dimer complexes.
Nucleic Acids Res., 39, 2011
3QVG
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BU of 3qvg by Molmil
XRCC1 bound to DNA ligase
Descriptor: DNA ligase 3, DNA repair protein XRCC1
Authors:Cuneo, M.J, Krahn, J.M, London, R.E.
Deposit date:2011-02-25
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:The structural basis for partitioning of the XRCC1/DNA ligase III-{alpha} BRCT-mediated dimer complexes.
Nucleic Acids Res., 39, 2011
3PC6
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BU of 3pc6 by Molmil
X-ray crystal structure of the second XRCC1 BRCT domain.
Descriptor: DNA repair protein XRCC1
Authors:Cuneo, M.J, Krahn, J.M, London, R.E.
Deposit date:2010-10-21
Release date:2011-06-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structural basis for partitioning of the XRCC1/DNA ligase III-{alpha} BRCT-mediated dimer complexes.
Nucleic Acids Res., 39, 2011
6UN8
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BU of 6un8 by Molmil
Wild type ANT bound to neomycin
Descriptor: Aminoglycoside NucleotidylTransferase, MAGNESIUM ION, NEOMYCIN
Authors:Cuneo, M.J, Selvaraj, B.
Deposit date:2019-10-11
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:"Catch and Release": a Variation of the Archetypal NucleotidylTransfer Reaction
ACS Catal, 10, 2020
5EAJ
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BU of 5eaj by Molmil
Crystal structure of DHFR in 0% Isopropanol
Descriptor: CALCIUM ION, CHLORIDE ION, Dihydrofolate reductase, ...
Authors:Cuneo, M.J, Agarwal, P.K.
Deposit date:2015-10-16
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Modulating Enzyme Activity by Altering Protein Dynamics with Solvent.
Biochemistry, 57, 2018
3PC8
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BU of 3pc8 by Molmil
X-ray crystal structure of the heterodimeric complex of XRCC1 and DNA ligase III-alpha BRCT domains.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA ligase 3, DNA repair protein XRCC1, ...
Authors:Cuneo, M.J, Krahn, J.M, London, R.E.
Deposit date:2010-10-21
Release date:2011-06-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:The structural basis for partitioning of the XRCC1/DNA ligase III-{alpha} BRCT-mediated dimer complexes.
Nucleic Acids Res., 39, 2011
3K77
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BU of 3k77 by Molmil
X-ray crystal structure of XRCC1
Descriptor: DNA repair protein XRCC1
Authors:Cuneo, M.J, London, R.E.
Deposit date:2009-10-12
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.597 Å)
Cite:Oxidation state of the XRCC1 N-terminal domain regulates DNA polymerase beta binding affinity.
Proc.Natl.Acad.Sci.USA, 107, 2010
6DTQ
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BU of 6dtq by Molmil
Maltose bound T. maritima MalE3
Descriptor: MAGNESIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, maltose-binding protein MalE3
Authors:Cuneo, M.J, Shukla, S.
Deposit date:2018-06-18
Release date:2018-09-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Differential Substrate Recognition by Maltose Binding Proteins Influenced by Structure and Dynamics.
Biochemistry, 57, 2018
3LQC
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BU of 3lqc by Molmil
X-ray crystal structure of oxidized XRCC1 bound to DNA pol beta Palm thumb domain
Descriptor: CARBONATE ION, DNA polymerase beta, DNA repair protein XRCC1, ...
Authors:Cuneo, M.J, Krahn, J.M, London, R.E.
Deposit date:2010-02-09
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.349 Å)
Cite:Oxidation state of the XRCC1 N-terminal domain regulates DNA polymerase beta binding affinity.
Proc.Natl.Acad.Sci.USA, 107, 2010
8DWU
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BU of 8dwu by Molmil
SPOP W22R Form 1
Descriptor: Speckle-type POZ protein
Authors:Cuneo, M.J, Mittag, T, O'Flynn, B.
Deposit date:2022-08-02
Release date:2023-01-18
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Higher-order SPOP assembly reveals a basis for cancer mutant dysregulation.
Mol.Cell, 83, 2023
2IOY
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BU of 2ioy by Molmil
Crystal structure of Thermoanaerobacter tengcongensis ribose binding protein
Descriptor: Periplasmic sugar-binding protein, beta-D-ribopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2006-10-11
Release date:2007-03-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The backbone structure of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein is essentially identical to its mesophilic E. coli homolog.
Bmc Struct.Biol., 8, 2008
5E8Q
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BU of 5e8q by Molmil
Crystal structure of DHFR in 20% Isopropanol
Descriptor: CALCIUM ION, CHLORIDE ION, Dihydrofolate reductase, ...
Authors:Cuneo, M.J, Agarwal, P.K.
Deposit date:2015-10-14
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Solvent conditions control enzyme dynamics and catalysis
To Be Published
6U0E
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BU of 6u0e by Molmil
Neutron crystal structure of T4L M6AE
Descriptor: Endolysin
Authors:Cuneo, M.J, Myles, D.A, Li, L.
Deposit date:2019-08-14
Release date:2020-09-02
Last modified:2023-10-25
Method:NEUTRON DIFFRACTION (2.106 Å), X-RAY DIFFRACTION
Cite:Solvent entry into cavities of T4 lysozyme
To be published
6U0F
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BU of 6u0f by Molmil
Neutron crystal structure of T4L L99AE
Descriptor: CHLORIDE ION, Endolysin
Authors:Cuneo, M.J, Myles, D.A, Li, L.
Deposit date:2019-08-14
Release date:2020-08-19
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (2.053 Å), X-RAY DIFFRACTION
Cite:Solvent entry into cavities of T4 lysozyme.
To be published
6U0B
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BU of 6u0b by Molmil
Neutron crystal structure of wtT4LD
Descriptor: CHLORIDE ION, Endolysin
Authors:Cuneo, M.J, Myles, D.A, Li, L.
Deposit date:2019-08-14
Release date:2020-08-19
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (1.951 Å), X-RAY DIFFRACTION
Cite:Solvent entry into cavities of T4 lysozyme.
To be published
6U0C
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BU of 6u0c by Molmil
Neutron crystal structure of wtT4LE
Descriptor: CHLORIDE ION, Endolysin
Authors:Cuneo, M.J, Myles, D.A, Li, L.
Deposit date:2019-08-14
Release date:2020-08-19
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION
Cite:Solvent entry into cavities of T4 lysozyme.
To be published

 

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