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PDB: 267 件
2B63
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Complete RNA Polymerase II-RNA inhibitor complex
分子名称: 31-MER, DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ...
著者Kettenberger, H, Eisenfuehr, A, Brueckner, F, Theis, M, Famulok, M, Cramer, P.
登録日2005-09-30
公開日2005-12-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structure of an RNA polymerase II-RNA inhibitor complex elucidates transcription regulation by noncoding RNAs
Nat.Struct.Mol.Biol., 13, 2006
1RO0
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Bifunctional DNA primase/polymerase domain of ORF904 from the archaeal plasmid pRN1- Triple mutant F50M/L107M/L110M SeMet remote
分子名称: ORF904, ZINC ION
著者Lipps, G, Weinzierl, A.O, von Scheven, G, Buchen, C, Cramer, P.
登録日2003-12-01
公開日2004-01-27
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of a bifunctional DNA primase-polymerase
Nat.Struct.Mol.Biol., 11, 2004
1RO2
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Bifunctional DNA primase/polymerase domain of ORF904 from the archaeal plasmid pRN1- Triple mutant F50M/L107M/L110M manganese soak
分子名称: MANGANESE (II) ION, ZINC ION, hypothetical protein ORF904
著者Lipps, G, Weinzierl, A.O, von Scheven, G, Buchen, C, Cramer, P.
登録日2003-12-01
公開日2004-01-27
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of a bifunctional DNA primase-polymerase
Nat.Struct.Mol.Biol., 11, 2004
1SZA
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The RNA polymerase II CTD in mRNA processing: beta-turn recognition and beta-spiral model
分子名称: CTD-peptide, PCF11 protein
著者Meinhart, A, Cramer, P.
登録日2004-04-05
公開日2004-07-13
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Recognition of RNA polymerase II carboxy-terminal domain by 3'-RNA-processing factors.
Nature, 430, 2004
2CKZ
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X-ray structure of RNA polymerase III subcomplex C17-C25.
分子名称: DNA-DIRECTED RNA POLYMERASE III 18 KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE III 25 KD POLYPEPTIDE
著者Jasiak, A.J, Armache, K.-J, Martens, B, Jansen, R.-P, Cramer, P.
登録日2006-04-24
公開日2006-07-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Biology of RNA Polymerase III: Subcomplex C17/-C25 X-Ray Structure and 11-Subunit Enzyme Model
Mol.Cell, 23, 2006
1SZ9
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The RNA polymerase II CTD in mRNA processing: beta-turn recognition and beta-spiral model
分子名称: PCF11 protein
著者Meinhart, A, Cramer, P.
登録日2004-04-05
公開日2004-07-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Recognition of RNA polymerase II carboxy-terminal domain by 3'-RNA-processing factors.
Nature, 430, 2004
1TA0
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Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand.
分子名称: CITRIC ACID, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, MAGNESIUM ION
著者Kamenski, T, Heilmeier, S, Meinhart, T, Cramer, P.
登録日2004-05-19
公開日2004-08-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and Mechanism of RNA Polymerase II CTD Phosphatases.
Mol.Cell, 15, 2004
1T9Z
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Three-dimensional structure of a RNA-polymerase II binding protein.
分子名称: CITRIC ACID, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, MAGNESIUM ION
著者Kamenski, T, Heilmeier, S, Meinhart, A, Cramer, P.
登録日2004-05-19
公開日2004-08-31
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Mechanism of RNA Polymerase II CTD Phosphatases.
Mol.Cell, 15, 2004
2HZM
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Structure of the Mediator head subcomplex Med18/20
分子名称: PHOSPHATE ION, RNA polymerase II mediator complex subunit 18, RNA polymerase II mediator complex subunit 20
著者Lariviere, L, Geiger, S, Hoeppner, S, Rother, S, Straesser, K, Cramer, P.
登録日2006-08-09
公開日2006-09-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and TBP binding of the Mediator head subcomplex Med8-Med18-Med20.
Nat.Struct.Mol.Biol., 13, 2006
2JA8
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CPD lesion containing RNA Polymerase II elongation complex D
分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP *CP*TP*TP*TP*TP*TTP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP *AP*GP*CP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*AP*UP)-3', ...
著者Brueckner, F, Hennecke, U, Carell, T, Cramer, P.
登録日2006-11-23
公開日2007-02-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Cpd Damage Recognition by Transcribing RNA Polymerase II.
Science, 315, 2007
2JA7
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CPD lesion containing RNA Polymerase II elongation complex C
分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP *CP*TP*TP*TP*TTP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP *AP*GP*CP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3', ...
著者Brueckner, F, Hennecke, U, Carell, T, Cramer, P.
登録日2006-11-23
公開日2007-02-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Cpd Damage Recognition by Transcribing RNA Polymerase II.
Science, 315, 2007
2JA6
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CPD lesion containing RNA Polymerase II elongation complex B
分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP *CP*TP*TP*TTP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP *AP*GP*CP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3', ...
著者Brueckner, F, Hennecke, U, Carell, T, Cramer, P.
登録日2006-11-23
公開日2007-02-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献CPD damage recognition by transcribing RNA polymerase II.
Science, 315, 2007
2JA5
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CPD lesion containing RNA Polymerase II elongation complex A
分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP *CP*TP*TTP*TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3', DNA-directed RNA polymerase II subunit RPB1, ...
著者Brueckner, F, Hennecke, U, Carell, T, Cramer, P.
登録日2006-11-23
公開日2007-02-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Cpd Damage Recognition by Transcribing RNA Polymerase II
Science, 315, 2007
2HZS
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Structure of the Mediator head submodule Med8C/18/20
分子名称: RNA polymerase II mediator complex subunit 18, RNA polymerase II mediator complex subunit 20, RNA polymerase II mediator complex subunit 8
著者Lariviere, L, Geiger, S, Hoeppner, S, Rother, S, Straesser, K, Cramer, P.
登録日2006-08-09
公開日2006-09-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure and TBP binding of the Mediator head subcomplex Med8-Med18-Med20.
Nat.Struct.Mol.Biol., 13, 2006
3FBI
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BU of 3fbi by Molmil
Structure of the Mediator submodule Med7N/31
分子名称: Mediator of RNA polymerase II transcription subunit 31, Mediator of RNA polymerase II transcription subunit 7
著者Koschubs, T, Seizl, M, Lariviere, L, Kurth, F, Baumli, S, Martin, D.E, Cramer, P.
登録日2008-11-19
公開日2008-12-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Identification, structure, and functional requirement of the Mediator submodule Med7N/31
Embo J., 28, 2009
3FBN
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Structure of the Mediator submodule Med7N/31
分子名称: Mediator of RNA polymerase II transcription subunit 31, Mediator of RNA polymerase II transcription subunit 7
著者Koschubs, T, Seizl, M, Lariviere, L, Kurth, F, Baumli, S, Martin, D.E, Cramer, P.
登録日2008-11-19
公開日2008-12-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.007 Å)
主引用文献Identification, structure, and functional requirement of the Mediator submodule Med7N/31
Embo J., 28, 2009
3GXW
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BU of 3gxw by Molmil
Structure of the SH2 domain of the Candida glabrata transcription elongation factor Spt6, crystal form A
分子名称: SODIUM ION, SUCCINIC ACID, Transcription elongation factor SPT6
著者Dengl, S, Mayer, A, Sun, M, Cramer, P.
登録日2009-04-03
公開日2009-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and in vivo requirement of the yeast Spt6 SH2 domain
J.Mol.Biol., 389, 2009
3GXX
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Structure of the SH2 domain of the Candida glabrata transcription elongation factor Spt6, crystal form B
分子名称: Transcription elongation factor SPT6
著者Dengl, S, Mayer, A, Sun, M, Cramer, P.
登録日2009-04-03
公開日2009-05-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and in vivo requirement of the yeast Spt6 SH2 domain
J.Mol.Biol., 389, 2009
3H3V
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BU of 3h3v by Molmil
Yeast RNAP II containing poly(A)-signal sequence in the active site
分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*GP*CP*TP*GP*CP*TP*TP*TP*AP*TP*TP*GP*CP*AP*TP*T)-3', 5'-D(*CP*AP*GP*CP*TP*AP*CP*TP*TP*GP*AP*GP*CP*T)-3', 5'-R(*UP*GP*CP*AP*UP*UP*UP*CP*GP*CP*AP*AP*UP*AP*AP*A)-3', ...
著者Dengl, S, Cramer, P.
登録日2009-04-17
公開日2009-06-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Torpedo Nuclease Rat1 Is Insufficient to Terminate RNA Polymerase II in Vitro
J.Biol.Chem., 284, 2009
5L3X
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Crystal structure of negative elongation factor subcomplex NELF-AC
分子名称: CHLORIDE ION, Negative elongation factor A, Negative elongation factor C/D
著者Poellmann, D, Vos, S.M, Cramer, P.
登録日2016-05-24
公開日2016-06-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Architecture and RNA binding of the human negative elongation factor.
Elife, 5, 2016
7PF0
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Trinucleosome of the 4x177 nucleosome array containing H1
分子名称: DNA (563-MER), Histone H1.4, Histone H2A type 1-B/E, ...
著者Dombrowski, M, Cramer, P.
登録日2021-08-11
公開日2022-08-03
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (11 Å)
主引用文献Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
5M3F
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Yeast RNA polymerase I elongation complex at 3.8A
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Neyer, S, Kunz, M, Geiss, C, Hantsche, M, Hodirnau, V.-V, Seybert, A, Engel, C, Scheffer, M.P, Cramer, P, Frangakis, A.S.
登録日2016-10-14
公開日2016-11-23
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of RNA polymerase I transcribing ribosomal DNA genes.
Nature, 540, 2016
5M3M
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Free monomeric RNA polymerase I at 4.0A resolution
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Neyer, S, Kunz, M, Geiss, C, Hantsche, M, Hodirnau, V.-V, Seybert, A, Engel, C, Scheffer, M.P, Cramer, P, Frangakis, A.S.
登録日2016-10-15
公開日2016-11-23
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of RNA polymerase I transcribing ribosomal DNA genes.
Nature, 540, 2016
5MY1
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E. coli expressome
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Kohler, R, Mooney, R.A, Mills, D.J, Kostrewa, D, Landick, R, Cramer, P.
登録日2017-01-25
公開日2017-04-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Architecture of a transcribing-translating expressome.
Science, 356, 2017
5N61
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RNA polymerase I initially transcribing complex
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
登録日2017-02-14
公開日2017-04-05
最終更新日2019-10-02
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017

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件を2024-08-21に公開中

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