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PDB: 72 results

6TOO
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BU of 6too by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 11a
Descriptor: 1,2-ETHANEDIOL, 2-chloranyl-4-[[1-methyl-3-[(2~{S})-2-oxidanylbutyl]-2-oxidanylidene-benzimidazol-5-yl]amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2019-12-11
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
3SC8
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BU of 3sc8 by Molmil
Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide BMSG-SH-3
Descriptor: 2,7-bis[3-(4-methylpiperazin-1-yl)propyl]-4,9-bis{[3-(4-methylpiperazin-1-yl)propyl]amino}benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone, Human telomeric repeat sequence, POTASSIUM ION
Authors:Collie, G.W, Promontorio, R, Parkinson, G.N.
Deposit date:2011-06-07
Release date:2012-02-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Structural basis for telomeric g-quadruplex targeting by naphthalene diimide ligands.
J.Am.Chem.Soc., 134, 2012
3T5E
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BU of 3t5e by Molmil
Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide BMSG-SH-4
Descriptor: 2,7-bis[4-(4-methylpiperazin-1-yl)butyl]-4,9-bis{[4-(4-methylpiperazin-1-yl)butyl]amino}benzo[lmn][3,8]phenanthroline-1 ,3,6,8(2H,7H)-tetrone, POTASSIUM ION, human telomeric DNA sequence
Authors:Collie, G.W, Promontorio, R, Parkinson, G.N.
Deposit date:2011-07-27
Release date:2012-02-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for telomeric g-quadruplex targeting by naphthalene diimide ligands.
J.Am.Chem.Soc., 134, 2012
7OXB
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BU of 7oxb by Molmil
Crystal structure of EGFR double mutant (T790M/L858R) in complex with compound 6.
Descriptor: 2-[2-(3-methoxyphenyl)pyrimidin-4-yl]-1'-prop-2-enoyl-spiro[5,6-dihydro-1~{H}-pyrrolo[3,2-c]pyridine-7,4'-piperidine]-4-one, Epidermal growth factor receptor
Authors:Collie, G.W.
Deposit date:2021-06-22
Release date:2021-10-20
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Discovery and optimization of covalent EGFR T790M/L858R mutant inhibitors".
Bioorg.Med.Chem.Lett., 2021
5J0E
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BU of 5j0e by Molmil
Crystal structures of Pribnow box consensus promoter sequence (P32)
Descriptor: Complementary sequence, Pribnow box consensus promoter sequence, ZINC ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2016-03-28
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
5EYQ
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BU of 5eyq by Molmil
Racemic crystal structures of Pribnow box consensus promoter sequence (Pnna)
Descriptor: Complementary strand, Pribnow box template strand, SODIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
Deposit date:2015-11-25
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
5EZF
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BU of 5ezf by Molmil
Racemic crystal structures of Pribnow box consensus promoter sequence (Pbca)
Descriptor: CALCIUM ION, Complementary strand, Pribnow box template strand
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
Deposit date:2015-11-26
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
5F26
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BU of 5f26 by Molmil
Crystal structures of Pribnow box consensus promoter sequence (P63)
Descriptor: Complementary strand, Pribnow box consensus sequence strand
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
Deposit date:2015-12-01
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
5EWB
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BU of 5ewb by Molmil
Racemic crystal structures of Pribnow box consensus promoter sequence (P21/c)
Descriptor: PRIBNOW BOX CONSENSUS SEQUENCE- NON-TEMPLATE STRAND, PRIBNOW BOX CONSENSUS SEQUENCE- TEMPLATE STRAND
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
Deposit date:2015-11-20
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.694 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
5ET9
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BU of 5et9 by Molmil
Racemic crystal structures of Pribnow box consensus promoter sequence (P21/n)
Descriptor: BARIUM ION, Pribnow box consensus sequence- template strand, Pribnow box non-template strand
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
Deposit date:2015-11-17
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
6GN2
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BU of 6gn2 by Molmil
Racemic crystal structure of A-DNA duplex formed from d(CCCGGG) in space group R3
Descriptor: DNA (5'-D(*CP*CP*CP*GP*GP*G)-3'), trimethylamine oxide
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2018-05-29
Release date:2019-09-11
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Racemic crystal structures of A-DNA duplexes.
Acta Crystallogr D Struct Biol, 78, 2022
6GN3
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BU of 6gn3 by Molmil
Racemic crystal structure of A-DNA duplex formed from d(CCCGGG) in space group P21/n
Descriptor: CHLORIDE ION, COBALT (II) ION, DNA (5'-D(*CP*CP*CP*GP*GP*G)-3'), ...
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2018-05-29
Release date:2019-09-11
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Racemic crystal structures of A-DNA duplexes.
Acta Crystallogr D Struct Biol, 78, 2022
6Z45
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BU of 6z45 by Molmil
CDK9-Cyclin-T1 complex bound by compound 24
Descriptor: (1~{S},3~{R})-3-acetamido-~{N}-[5-chloranyl-4-(5,5-dimethyl-4,6-dihydropyrrolo[1,2-b]pyrazol-3-yl)pyridin-2-yl]cyclohexane-1-carboxamide, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cyclin-T1, ...
Authors:Ferguson, A, Collie, G.W.
Deposit date:2020-05-22
Release date:2020-12-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:Discovery of AZD4573, a Potent and Selective Inhibitor of CDK9 That Enables Short Duration of Target Engagement for the Treatment of Hematological Malignancies.
J.Med.Chem., 63, 2020
4R45
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BU of 4r45 by Molmil
Racemic crystal structure of a bimolecular DNA G-quadruplex (P-1)
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', POTASSIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R4A
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BU of 4r4a by Molmil
Racemic crystal structure of a cobalt-bound B-DNA duplex
Descriptor: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', COBALT (II) ION, SPERMINE
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R49
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BU of 4r49 by Molmil
Racemic crystal structure of a calcium-bound B-DNA duplex
Descriptor: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', CALCIUM ION, SODIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R48
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BU of 4r48 by Molmil
Racemic crystal structure of a calcium-bound DNA four-way junction
Descriptor: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', CALCIUM ION, SODIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R4D
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BU of 4r4d by Molmil
Racemic crystal structure of a magnesium-bound B-DNA duplex
Descriptor: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', MAGNESIUM ION, SODIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R47
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BU of 4r47 by Molmil
Racemic crystal structure of a bimolecular DNA G-quadruplex (P21/n)
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', MAGNESIUM ION, POTASSIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R44
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BU of 4r44 by Molmil
Racemic crystal structure of a tetramolecular DNA G-quadruplex
Descriptor: 5'-D(*TP*GP*GP*GP*GP*T)-3', POTASSIUM ION, SODIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.695 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
7AY9
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BU of 7ay9 by Molmil
Crystal structure of CK2 bound by compound 7
Descriptor: 1,2-ETHANEDIOL, 7-(cyclopropylamino)-5-(5-(6-oxo-1,6-dihydropyridin-3-yl)-1-(2-(piperidin-1-yl)ethyl)-1H-1,2,3-triazol-4-yl)pyrazolo[1,5-a]pyrimidine-3-carbonitrile, Casein kinase II subunit alpha, ...
Authors:Ferguson, A, Collie, G.W.
Deposit date:2020-11-11
Release date:2021-11-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Metadynamics simulations of CK2 compound unbinding to understand slow dissociation kinetics.
To Be Published
7AYA
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BU of 7aya by Molmil
Crystal structure of CK2 bound by compound 9
Descriptor: 1,2-ETHANEDIOL, Casein kinase II subunit alpha, SULFATE ION, ...
Authors:Ferguson, A, Collie, G.W.
Deposit date:2020-11-11
Release date:2021-11-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Metadynamics simulations of CK2 compound unbinding to understand slow dissociation kinetics.
To Be Published
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