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PDB: 73 results

7ZSG
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Structure of Orange Carotenoid Protein with canthaxanthin bound after 1 minute of illumination
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Chukhutsina, V.U, Baxter, J.M, Fadini, A, Morgan, R.M, Pope, M.A, Maghlaoui, K, Orr, C, Wagner, A, van Thor, J.J.
Deposit date:2022-05-06
Release date:2022-11-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Light activation of Orange Carotenoid Protein reveals bicycle-pedal single-bond isomerization.
Nat Commun, 13, 2022
2WA8
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Structural basis of N-end rule substrate recognition in Escherichia coli by the ClpAP adaptor protein ClpS - The Phe peptide structure
Descriptor: ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS, N-END RULE PEPTIDE
Authors:Schuenemann, V.J, Kralik, S.M, Albrecht, R, Spall, S.K, Truscott, K.N, Dougan, D.A, Zeth, K.
Deposit date:2009-02-03
Release date:2009-04-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Basis of N-End Rule Substrate Recognition in Escherichia Coli by the Clpap Adaptor Protein Clps.
Embo Rep., 10, 2009
2WA9
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Structural basis of N-end rule substrate recognition in Escherichia coli by the ClpAP adaptor protein ClpS - Trp peptide structure
Descriptor: ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS, TRP PEPTIDE
Authors:Schuenemann, V.J, Kralik, S.M, Albrecht, R, Spall, S.K, Truscott, K.N, Dougan, D.A, Zeth, K.
Deposit date:2009-02-03
Release date:2009-04-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis of N-End Rule Substrate Recognition in Escherichia Coli by the Clpap Adaptor Protein Clps.
Embo Rep., 10, 2009
1LCC
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STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
Descriptor: DNA (5'-D(*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*T)-3'), Lac Repressor, ...
Authors:Chuprina, V.P, Rullmann, J.A.C, Lamerichs, R.M.J.N, Van Boom, J.H, Boelens, R, Kaptein, R.
Deposit date:1993-03-25
Release date:1994-01-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics.
J.Mol.Biol., 234, 1993
1LCD
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STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
Descriptor: DNA (5'-D(*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*T)-3'), Lac Repressor, ...
Authors:Chuprina, V.P, Rullmann, J.A.C, Lamerichs, R.M.J.N, Van Boom, J.H, Boelens, R, Kaptein, R.
Deposit date:1993-03-25
Release date:1994-01-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics.
J.Mol.Biol., 234, 1993
4GD9
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BU of 4gd9 by Molmil
Circular Permuted Streptavidin N49/G48
Descriptor: BIOTIN, SULFATE ION, Streptavidin
Authors:Le Trong, I, Chu, V, Xing, Y, Lybrand, T.P, Stayton, P.S, Stenkamp, R.E.
Deposit date:2012-07-31
Release date:2013-06-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural consequences of cutting a binding loop: two circularly permuted variants of streptavidin.
Acta Crystallogr.,Sect.D, 69, 2013
4GDA
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Circular Permuted Streptavidin A50/N49
Descriptor: BIOTIN, ETHANOL, GLYCEROL, ...
Authors:Le Trong, I, Chu, V, Xing, Y, Lybrand, T.P, Stayton, P.S, Stenkamp, R.E.
Deposit date:2012-07-31
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural consequences of cutting a binding loop: two circularly permuted variants of streptavidin.
Acta Crystallogr.,Sect.D, 69, 2013
1KBU
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BU of 1kbu by Molmil
CRE RECOMBINASE BOUND TO A LOXP HOLLIDAY JUNCTION
Descriptor: CRE RECOMBINASE, LOXP
Authors:Martin, S.S, Pulido, E, Chu, V.C, Lechner, T, Baldwin, E.P.
Deposit date:2001-11-06
Release date:2002-06-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Order of Strand Exchanges in Cre-LoxP Recombination and its Basis Suggested by the Crystal Structure of a Cre-LoxP Holliday Junction Complex
J.Mol.Biol., 319, 2002
1MA7
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Crystal structure of Cre site-specific recombinase complexed with a mutant DNA substrate, LoxP-A8/T27
Descriptor: CRE RECOMBINASE, LOXP
Authors:Martin, S.S, Chu, V.C, Baldwin, E.P.
Deposit date:2002-08-01
Release date:2003-07-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Modulation of the active complex assembly and turnover rate by protein-DNA interactions in Cre-LoxP recombination
Biochemistry, 42, 2003
1SWG
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CIRCULAR PERMUTED STREPTAVIDIN E51/A46 IN COMPLEX WITH BIOTIN
Descriptor: BIOTIN, CIRCULARLY PERMUTED CORE-STREPTAVIDIN E51/A46
Authors:Freitag, S, Chu, V, Le Trong, I, Stayton, P.S, Stenkamp, R.E.
Deposit date:1997-07-12
Release date:1998-07-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Thermodynamic and structural consequences of flexible loop deletion by circular permutation in the streptavidin-biotin system.
Protein Sci., 7, 1998
1SWF
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BU of 1swf by Molmil
CIRCULAR PERMUTED STREPTAVIDIN E51/A46
Descriptor: CIRCULARLY PERMUTED CORE-STREPTAVIDIN E51/A46
Authors:Freitag, S, Chu, V, Le Trong, I, Stayton, P.S, Stenkamp, R.E.
Deposit date:1997-04-23
Release date:1998-04-29
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Thermodynamic and structural consequences of flexible loop deletion by circular permutation in the streptavidin-biotin system.
Protein Sci., 7, 1998
1N43
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BU of 1n43 by Molmil
Streptavidin Mutant N23A with biotin at 1.89A
Descriptor: BIOTIN, Streptavidin
Authors:Le Trong, I, Freitag, S, Klumb, L.A, Chu, V, Stayton, P.S, Stenkamp, R.E.
Deposit date:2002-10-30
Release date:2003-09-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural studies of hydrogen bonds in the high-affinity streptavidin-biotin complex: mutations of amino acids interacting with the ureido oxygen of biotin.
Acta Crystallogr.,Sect.D, 59, 2003
1NDJ
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BU of 1ndj by Molmil
Streptavidin Mutant Y43F with Biotin at 1.81A Resolution
Descriptor: BIOTIN, Streptavidin
Authors:Le Trong, I, Freitag, S, Klumb, L.A, Chu, V, Stayton, P.S, Stenkamp, R.E.
Deposit date:2002-12-09
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural studies of hydrogen bonds in the high-affinity streptavidin-biotin complex: mutations of amino acids interacting with the ureido oxygen of biotin.
Acta Crystallogr.,Sect.D, 59, 2003
1NC9
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BU of 1nc9 by Molmil
STREPTAVIDIN MUTANT Y43A WITH IMINOBIOTIN AT 1.8A RESOLUTION
Descriptor: 2-IMINOBIOTIN, Streptavidin
Authors:Le Trong, I, Freitag, S, Klumb, L.A, Chu, V, Stayton, P.S, Stenkamp, R.E.
Deposit date:2002-12-05
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural studies of hydrogen bonds in the high-affinity streptavidin-biotin complex: mutations of amino acids interacting with the ureido oxygen of biotin.
Acta Crystallogr.,Sect.D, 59, 2003
1NBX
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BU of 1nbx by Molmil
Streptavidin Mutant Y43A at 1.70A Resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Streptavidin
Authors:Le Trong, I, Freitag, S, Klumb, L.A, Chu, V, Stayton, P.S, Stenkamp, R.E.
Deposit date:2002-12-04
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural studies of hydrogen bonds in the high-affinity streptavidin-biotin complex: mutations of amino acids interacting with the ureido oxygen of biotin.
Acta Crystallogr.,Sect.D, 59, 2003
1N7Y
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BU of 1n7y by Molmil
STREPTAVIDIN MUTANT N23E AT 1.96A
Descriptor: Streptavidin
Authors:Le Trong, I, Freitag, S, Klumb, L.A, Chu, V, Stayton, P.S, Stenkamp, R.E.
Deposit date:2002-11-18
Release date:2003-09-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural studies of hydrogen bonds in the high-affinity streptavidin-biotin complex: mutations of amino acids interacting with the ureido oxygen of biotin.
Acta Crystallogr.,Sect.D, 59, 2003
1N9M
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BU of 1n9m by Molmil
Streptavidin Mutant S27A with Biotin at 1.6A Resolution
Descriptor: BIOTIN, Streptavidin
Authors:Le Trong, I, Freitag, S, Klumb, L.A, Chu, V, Stayton, P.S, Stenkamp, R.E.
Deposit date:2002-11-25
Release date:2003-09-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural studies of hydrogen bonds in the high-affinity streptavidin-biotin complex: mutations of amino acids interacting with the ureido oxygen of biotin.
Acta Crystallogr.,Sect.D, 59, 2003
1N9Y
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Streptavidin Mutant S27A at 1.5A Resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Streptavidin
Authors:Le Trong, I, Freitag, S, Klumb, L.A, Chu, V, Stayton, P.S, Stenkamp, R.E.
Deposit date:2002-11-26
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural studies of hydrogen bonds in the high-affinity streptavidin-biotin complex: mutations of amino acids interacting with the ureido oxygen of biotin.
Acta Crystallogr.,Sect.D, 59, 2003
1N4J
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STREPTAVIDIN MUTANT N23A AT 2.18A
Descriptor: Streptavidin
Authors:Le Trong, I, Freitag, S, Klumb, L.A, Chu, V, Stayton, P.S, Stenkamp, R.E.
Deposit date:2002-10-31
Release date:2003-09-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural studies of hydrogen bonds in the high-affinity streptavidin-biotin complex: mutations of amino acids interacting with the ureido oxygen of biotin.
Acta Crystallogr.,Sect.D, 59, 2003
1SWT
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BU of 1swt by Molmil
CORE-STREPTAVIDIN MUTANT D128A IN COMPLEX WITH BIOTIN AT PH 4.5
Descriptor: BIOTIN, PROTEIN (STREPTAVIDIN)
Authors:Freitag, S, Le Trong, I, Chu, V, Klumb, L.A, Stayton, P.S, Stenkamp, R.E.
Deposit date:1998-10-22
Release date:1999-07-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A structural snapshot of an intermediate on the streptavidin-biotin dissociation pathway.
Proc.Natl.Acad.Sci.USA, 96, 1999
1SWS
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BU of 1sws by Molmil
CORE-STREPTAVIDIN MUTANT D128A AT PH 4.5
Descriptor: PROTEIN (STREPTAVIDIN)
Authors:Freitag, S, Chu, V, Le Trong, I, Klumb, L.A, To, R, Stayton, P.S, Stenkamp, R.E.
Deposit date:1998-10-22
Release date:1999-07-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A structural snapshot of an intermediate on the streptavidin-biotin dissociation pathway.
Proc.Natl.Acad.Sci.USA, 96, 1999
2G9P
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BU of 2g9p by Molmil
NMR structure of a novel antimicrobial peptide, latarcin 2a, from spider (Lachesana tarabaevi) venom
Descriptor: antimicrobial peptide Latarcin 2a
Authors:Dubovskii, P.V, Volynsky, P.E, Polyansky, A.A, Chupin, V.V, Efremov, R.G, Arseniev, A.S.
Deposit date:2006-03-07
Release date:2006-09-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Spatial structure and activity mechanism of a novel spider antimicrobial peptide.
Biochemistry, 45, 2006
6Z4C
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BU of 6z4c by Molmil
The structure of the N-terminal domain of RssB from E. coli
Descriptor: Regulator of RpoS
Authors:Zeth, K, Dimce, M, Terrence, D.M, Schuenemann, V, Dougan, D.
Deposit date:2020-05-25
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insight into the RssB-Mediated Recognition and Delivery of sigma s to the AAA+ Protease, ClpXP.
Biomolecules, 10, 2020
6QFA
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BU of 6qfa by Molmil
CryoEM structure of a beta3K279T GABA(A)R homomer in complex with histamine and megabody Mb25
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit beta-3,Gamma-aminobutyric acid receptor subunit beta-3, HISTAMINE, ...
Authors:Uchanski, T, Masiulis, S, Fischer, B, Kalichuk, V, Wohlkoening, A, Zoegg, T, Remaut, H, Vranken, W, Aricescu, A.R, Pardon, E, Steyaert, J.
Deposit date:2019-01-09
Release date:2021-08-04
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Megabodies expand the nanobody toolkit for protein structure determination by single-particle cryo-EM.
Nat.Methods, 18, 2021
6T64
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BU of 6t64 by Molmil
A model of the EIAV CA-SP hexamer (C6) from Gag-deltaMA spheres assembled at pH6
Descriptor: Gag polyprotein
Authors:Dick, R.A, Xu, C, Morado, D.R, Kravchuk, V, Ricana, C.L, Lyddon, T.D, Broad, A.M, Feathers, J.R, Johnson, M.C, Vogt, V.M, Perilla, J.R, Briggs, J.A.G, Schur, F.K.M.
Deposit date:2019-10-17
Release date:2020-01-15
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structures of immature EIAV Gag lattices reveal a conserved role for IP6 in lentivirus assembly.
Plos Pathog., 16, 2020

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