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PDB: 15 results

1QKG
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DNA DECAMER DUPLEX CONTAINING T-T DEWAR PHOTOPRODUCT
Descriptor: DNA (5'-D(*CP*GP*CP*AP*(HYD)TP*+TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3')
Authors:Lee, J.-H, Bae, S.-H, Choi, Y.-J, Choi, B.-S.
Deposit date:1999-07-20
Release date:2000-05-11
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The Dewar Photoproduct of Thymidylyl(3'-->5')-Thymidine (Dewar Product) Exhibits Mutagenic Behavior in Accordance with the "A Rule".
Proc.Natl.Acad.Sci.USA, 97, 2000
2OQQ
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Crystal structure of HY5 leucine zipper homodimer from Arabidopsis thaliana
Descriptor: Transcription factor HY5
Authors:Yoon, M.-K, Kim, H.M, Choi, G, Lee, J.-O, Choi, B.-S.
Deposit date:2007-02-01
Release date:2007-03-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the conformational integrity of the Arabidopsis thaliana HY5 leucine zipper homodimer.
J.Biol.Chem., 282, 2007
1CFL
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DNA DECAMER DUPLEX CONTAINING T5-T6 PHOTOADDUCT
Descriptor: DNA (5'-D(*CP*GP*CP*AP*(64T)P*TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3')
Authors:Lee, J.-H, Hwang, G.-S, Choi, B.-S.
Deposit date:1999-03-19
Release date:1999-05-28
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of a DNA decamer duplex containing the stable 3' T.G base pair of the pyrimidine(6-4)pyrimidone photoproduct [(6-4) adduct]: implications for the highly specific 3' T --> C transition of the (6-4) adduct.
Proc.Natl.Acad.Sci.USA, 96, 1999
1JO7
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Solution Structure of Influenza A Virus Promoter
Descriptor: Influenza A virus promoter RNA
Authors:Bae, S.-H, Cheong, H.-K, Lee, J.-H, Cheong, C, Kainosho, M, Choi, B.-S.
Deposit date:2001-07-27
Release date:2001-09-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural features of an influenza virus promoter and their implications for viral RNA synthesis.
Proc.Natl.Acad.Sci.USA, 98, 2001
1UAB
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NMR structure of hemimethylated GATC site
Descriptor: DNA (5'-D(*CP*GP*CP*AP*GP*(6MA)P*TP*CP*TP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*TP*CP*TP*GP*CP*G)-3')
Authors:Bae, S.-H, Cheong, H.-K, Kang, S, Hwang, D.S, Cheong, C, Choi, B.-S.
Deposit date:2003-03-07
Release date:2004-04-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and dynamics of hemimethylated GATC sites: implications for DNA-SeqA recognition
J.Biol.Chem., 278, 2003
2LWK
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Solution structure of small molecule-influenza RNA complex
Descriptor: 6,7-dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine, RNA (32-MER)
Authors:Lee, M.-K, Varani, G, Choi, B.-S, Pellecchia, M, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-08-01
Release date:2012-08-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A novel small-molecule binds to the influenza A virus RNA promoter and inhibits viral replication.
Chem.Commun.(Camb.), 50, 2014
1QL5
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DNA DECAMER DUPLEX CONTAINING T5-T6 PHOTOADDUCT
Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*+TP*AP*CP*GP*C)- 3'), DNA (5'-D(*GP*CP*GP*TP*TP*AP*TP*GP*CP*G)-3')
Authors:Lee, J.-H, Hwang, G.-S, Choi, B.-S.
Deposit date:1999-08-24
Release date:2000-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of a DNA Decamer Duplex Containing the 3' T.T Base Pair of the Cis-Syn Cyclobutane Pyrimidine Dimer: Implication for the Mutagenic Property of the Cis-Syn Dimer.
Nucleic Acids Res., 28, 2000
6KYV
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Crystal Structure of RIG-I and hairpin RNA with G-U wobble base pairs
Descriptor: Probable ATP-dependent RNA helicase DDX58, RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3'), ZINC ION
Authors:Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S.
Deposit date:2019-09-20
Release date:2020-09-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and biophysical properties of RIG-I bound to dsRNA with G-U wobble base pairs.
Rna Biol., 17, 2020
2KV2
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Solution Structure of the human BLM HRDC domain
Descriptor: Bloom syndrome protein
Authors:Kim, Y.M, Choi, B.-S.
Deposit date:2010-03-04
Release date:2010-12-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and function of the regulatory HRDC domain from human Bloom syndrome protein
Nucleic Acids Res., 38, 2010
1MFY
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SOLUTION STRUCTURE OF INFLUENZA A VIRUS C4 PROMOTER
Descriptor: C4 promoter of influneza A virus
Authors:Lee, M.-K, Bae, S.-H, Park, C.-J, Cheong, H.-K, Cheong, C, Choi, B.-S.
Deposit date:2002-08-14
Release date:2002-09-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A single-nucleotide natural variation (U4 to C4) in an influenza A virus promoter exhibits a large structural change: implications for differential viral RNA synthesis by RNA-dependent RNA polymerase.
Nucleic Acids Res., 31, 2003
1PVE
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Solution structure of XPC binding domain of hHR23B
Descriptor: UV excision repair protein RAD23 homolog B
Authors:Kim, B, Ryu, K.-S, Kim, H.J, Choi, B.-S.
Deposit date:2003-06-27
Release date:2004-08-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of the XPC-binding domain of the human DNA repair protein hHR23B.
Febs J., 272, 2005
1M82
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SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS
Descriptor: RNA (25-MER): THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS
Authors:Park, C.-J, Bae, S.-H, Lee, M.-K, Varani, G, Choi, B.-S.
Deposit date:2002-07-24
Release date:2003-06-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the influenza A virus cRNA promoter: implications for differential recognition of viral promoter structures by RNA-dependent RNA polymerase
NUCLEIC ACIDS RES., 31, 2003
6L0Y
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Structure of dsRNA with G-U wobble base pairs
Descriptor: RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3')
Authors:Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S.
Deposit date:2019-09-27
Release date:2020-09-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of dsRNA with G-U wobble base pairs
To Be Published
1OQ2
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NMR structure of hemimethylated GATC site
Descriptor: 5'-D(*CP*GP*CP*AP*GP*(6MA)P*TP*CP*TP*CP*GP*C)-3', 5'-D(*GP*CP*GP*AP*GP*AP*TP*CP*TP*GP*CP*G)-3'
Authors:Bae, S.-H, Cheong, H.-K, Kang, S, Hwang, D.S, Cheong, C, Choi, B.-S.
Deposit date:2003-03-07
Release date:2004-04-27
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and dynamics of hemimethylated GATC sites: implications for DNA-SeqA recognition
J.Biol.Chem., 278, 2003
1OPQ
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NMR structure of unmethylated GATC site
Descriptor: 5'-D(*CP*GP*CP*AP*GP*AP*TP*CP*TP*CP*GP*C)-3', 5'-D(*GP*CP*GP*AP*GP*AP*TP*CP*TP*GP*CP*G)-3'
Authors:Bae, S.-H, Cheong, H.-K, Kang, S, Hwang, D.S, Cheong, C, Choi, B.-S.
Deposit date:2003-03-06
Release date:2004-04-27
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and dynamics of hemimethylated GATC sites: implications for DNA-SeqA recognition
J.Biol.Chem., 278, 2003

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